RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 HIST1H2BAQ96A08 127 aa9.78□□□□□ -0.84
RHO-201ENST00000296271 GNG13Q9P2W3 67 aa9.78□□□□□ -0.84
RHO-201ENST00000296271 GNG12Q9UBI6 72 aa9.78□□□□□ -0.84
RHO-201ENST00000296271 DSCAML1Q8TD84 2053 aa9.78□□□□□ -0.84
RHO-201ENST00000296271 FCGR3BO75015 233 aa9.77□□□□□ -0.84
RHO-201ENST00000296271 IFNA5P01569 189 aa9.77□□□□□ -0.84
RHO-201ENST00000296271 OR9G9P0C7N8 305 aa9.77□□□□□ -0.84
RHO-201ENST00000296271 KLF3P57682 345 aaPredicted RBP9.77□□□□□ -0.84
RHO-201ENST00000296271 TIMM23BQ5SRD1 257 aa9.77□□□□□ -0.84
RHO-201ENST00000296271 GNPNAT1Q96EK6 184 aaPredicted RBP9.77□□□□□ -0.84
RHO-201ENST00000296271 TP53TG5Q9Y2B4 290 aa9.77□□□□□ -0.84
RHO-201ENST00000296271 SVEP1Q4LDE5 3571 aa9.77□□□□□ -0.85
RHO-201ENST00000296271 DYSFO75923 2080 aa9.77□□□□□ -0.85
RHO-201ENST00000296271 LRRC30A6NM36 301 aa9.77□□□□□ -0.85
RHO-201ENST00000296271 SCAF4O95104 1147 aaKnown RBP9.77□□□□□ -0.85
RHO-201ENST00000296271 SRP19P09132 144 aaKnown RBP9.77□□□□□ -0.85
RHO-201ENST00000296271 WNT2P09544 360 aa9.77□□□□□ -0.85
RHO-201ENST00000296271 RAB2AP61019 212 aa9.77□□□□□ -0.85
RHO-201ENST00000296271 TFF3Q07654 80 aa9.77□□□□□ -0.85
RHO-201ENST00000296271 SLC38A11Q08AI6 406 aa9.77□□□□□ -0.85
RHO-201ENST00000296271 SOHLH1Q5JUK2 328 aa9.77□□□□□ -0.85
RHO-201ENST00000296271 ASCL5Q7RTU5 278 aa9.77□□□□□ -0.85
RHO-201ENST00000296271 CLDND2Q8NHS1 167 aa9.77□□□□□ -0.85
RHO-201ENST00000296271 MUCL1Q96DR8 90 aa9.77□□□□□ -0.85
RHO-201ENST00000296271 QTRT1Q9BXR0 403 aaKnown RBP9.77□□□□□ -0.85
RHO-201ENST00000296271 TMPRSS5Q9H3S3 457 aa9.77□□□□□ -0.85
RHO-201ENST00000296271 ASH1LQ9NR48 2969 aaKnown RBP9.77□□□□□ -0.85
RHO-201ENST00000296271 MMP23AO75900 390 aa9.76□□□□□ -0.85
RHO-201ENST00000296271 AKR1D1P51857 326 aa9.76□□□□□ -0.85
RHO-201ENST00000296271 CCL8P80075 99 aa9.76□□□□□ -0.85
RHO-201ENST00000296271 HABP2Q14520 560 aaPredicted RBP9.76□□□□□ -0.85
RHO-201ENST00000296271 MORN2Q502X0 79 aa9.76□□□□□ -0.85
RHO-201ENST00000296271 FAM216BQ8N7L0 139 aa9.76□□□□□ -0.85
RHO-201ENST00000296271 RCC1LQ96I51 464 aaKnown RBP9.76□□□□□ -0.85
RHO-201ENST00000296271 PBDC1Q9BVG4 233 aa9.76□□□□□ -0.85
RHO-201ENST00000296271 SMCO4Q9NRQ5 59 aa9.76□□□□□ -0.85
RHO-201ENST00000296271 HSPB7Q9UBY9 170 aa9.76□□□□□ -0.85
RHO-201ENST00000296271 ABCA4P78363 2273 aa9.76□□□□□ -0.85
RHO-201ENST00000296271 A0A0G2JNJ9 132 aa9.76□□□□□ -0.85
RHO-201ENST00000296271 A0A1B0GWJ7 208 aa9.76□□□□□ -0.85
RHO-201ENST00000296271 MARCH11A6NNE9 402 aa9.76□□□□□ -0.85
RHO-201ENST00000296271 IFNL4K9M1U5 179 aa9.76□□□□□ -0.85
RHO-201ENST00000296271 M0R1X1 148 aa9.76□□□□□ -0.85
RHO-201ENST00000296271 MYOD1P15172 320 aa9.76□□□□□ -0.85
RHO-201ENST00000296271 CD200P41217 278 aa9.76□□□□□ -0.85
RHO-201ENST00000296271 LOXL3P58215 753 aa9.76□□□□□ -0.85
RHO-201ENST00000296271 LRRC75BQ2VPJ9 315 aa9.76□□□□□ -0.85
RHO-201ENST00000296271 ZNF343Q6P1L6 599 aa9.76□□□□□ -0.85
RHO-201ENST00000296271 COMMD1Q8N668 190 aa9.76□□□□□ -0.85
RHO-201ENST00000296271 SCGB1C1Q8TD33 95 aa9.76□□□□□ -0.85
RHO-201ENST00000296271 LURAP1Q96LR2 239 aa9.76□□□□□ -0.85
RHO-201ENST00000296271 WDR61Q9GZS3 305 aaKnown RBP9.76□□□□□ -0.85
RHO-201ENST00000296271 Q9UFV3 132 aa9.76□□□□□ -0.85
RHO-201ENST00000296271 A8MXE2 369 aa9.75□□□□□ -0.85
RHO-201ENST00000296271 H3BQ15 152 aa9.75□□□□□ -0.85
RHO-201ENST00000296271 SPINT2O43291 252 aa9.75□□□□□ -0.85
RHO-201ENST00000296271 DFFBO76075 338 aa9.75□□□□□ -0.85
RHO-201ENST00000296271 IGHV1-46P01743 117 aa9.75□□□□□ -0.85
RHO-201ENST00000296271 GLRXP35754 106 aa9.75□□□□□ -0.85
RHO-201ENST00000296271 AVPI1Q5T686 147 aa9.75□□□□□ -0.85
RHO-201ENST00000296271 ACSM6Q6P461 480 aa9.75□□□□□ -0.85
RHO-201ENST00000296271 TMEM14EPQ6UXP3 125 aa9.75□□□□□ -0.85
RHO-201ENST00000296271 H2BFWTQ7Z2G1 175 aa9.75□□□□□ -0.85
RHO-201ENST00000296271 FAM90A1Q86YD7 464 aa9.75□□□□□ -0.85
RHO-201ENST00000296271 DOLPP1Q86YN1 238 aa9.75□□□□□ -0.85
RHO-201ENST00000296271 GATAD1Q8WUU5 269 aa9.75□□□□□ -0.85
RHO-201ENST00000296271 CCL13Q99616 98 aa9.75□□□□□ -0.85
RHO-201ENST00000296271 GCM1Q9NP62 436 aa9.75□□□□□ -0.85
RHO-201ENST00000296271 PRELID3BQ9Y3B1 194 aa9.75□□□□□ -0.85
RHO-201ENST00000296271 PMS2P5A8MQ11 134 aa9.75□□□□□ -0.85
RHO-201ENST00000296271 CLDN14O95500 239 aa9.75□□□□□ -0.85
RHO-201ENST00000296271 GYPAP02724 150 aa9.75□□□□□ -0.85
RHO-201ENST00000296271 DUTP33316 252 aaKnown RBP9.75□□□□□ -0.85
RHO-201ENST00000296271 GPR12P47775 334 aa9.75□□□□□ -0.85
RHO-201ENST00000296271 RAB13P51153 203 aa9.75□□□□□ -0.85
RHO-201ENST00000296271 FLI1Q01543 452 aaPredicted RBP9.75□□□□□ -0.85
RHO-201ENST00000296271 WFDC8Q8IUA0 241 aa9.75□□□□□ -0.85
RHO-201ENST00000296271 RPP25LQ8N5L8 163 aaKnown RBP9.75□□□□□ -0.85
RHO-201ENST00000296271 Q8NA96 180 aa9.75□□□□□ -0.85
RHO-201ENST00000296271 DTD1Q8TEA8 209 aa9.75□□□□□ -0.85
RHO-201ENST00000296271 RAB39BQ96DA2 213 aa9.75□□□□□ -0.85
RHO-201ENST00000296271 KIAA1456Q9P272 454 aa9.75□□□□□ -0.85
RHO-201ENST00000296271 URGCP-MRPS24S4R325 110 aa9.75□□□□□ -0.85
RHO-201ENST00000296271 PCP4L1A6NKN8 68 aa9.74□□□□□ -0.85
RHO-201ENST00000296271 RNF212BA8MTL3 300 aa9.74□□□□□ -0.85
RHO-201ENST00000296271 LHBP01229 141 aa9.74□□□□□ -0.85
RHO-201ENST00000296271 RPS23P62266 143 aaKnown RBP9.74□□□□□ -0.85
RHO-201ENST00000296271 FOXC1Q12948 553 aa9.74□□□□□ -0.85
RHO-201ENST00000296271 CATR1Q13166 79 aa9.74□□□□□ -0.85
RHO-201ENST00000296271 TCF23Q7RTU1 214 aa9.74□□□□□ -0.85
RHO-201ENST00000296271 FAM57AQ8TBR7 257 aa9.74□□□□□ -0.85
RHO-201ENST00000296271 TAF15Q92804 592 aaKnown RBP eCLIP9.74□□□□□ -0.85
RHO-201ENST00000296271 SLC25A22Q9H936 323 aa9.74□□□□□ -0.85
RHO-201ENST00000296271 CHD8Q9HCK8 2581 aa9.74□□□□□ -0.85
RHO-201ENST00000296271 CEBPZOSA8MTT3 80 aa9.74□□□□□ -0.85
RHO-201ENST00000296271 PPIHO43447 177 aaKnown RBP9.74□□□□□ -0.85
RHO-201ENST00000296271 CD40P25942 277 aa9.74□□□□□ -0.85
RHO-201ENST00000296271 CEACAM8P31997 349 aaPredicted RBP9.74□□□□□ -0.85
RHO-201ENST00000296271 GNG10P50151 68 aa9.74□□□□□ -0.85
RHO-201ENST00000296271 C17orf58Q2M2W7 97 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms