RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 DEFB108AA8MXU0 73 aa13.98□□□□□ -0.17
CPSF4-201ENST00000292476 TXNL1O43396 289 aa13.98□□□□□ -0.17
CPSF4-201ENST00000292476 MT-ND4LP03901 98 aa13.98□□□□□ -0.17
CPSF4-201ENST00000292476 CRYBA1P05813 215 aa13.98□□□□□ -0.17
CPSF4-201ENST00000292476 RAB2AP61019 212 aa13.98□□□□□ -0.17
CPSF4-201ENST00000292476 TRAT1Q6PIZ9 186 aa13.98□□□□□ -0.17
CPSF4-201ENST00000292476 ZBTB34Q8NCN2 500 aa13.98□□□□□ -0.17
CPSF4-201ENST00000292476 RBMXL1Q96E39 390 aaKnown RBP13.98□□□□□ -0.17
CPSF4-201ENST00000292476 SAV1Q9H4B6 383 aaPredicted RBP13.98□□□□□ -0.17
CPSF4-201ENST00000292476 TRAV1-1A0A0B4J248 108 aa13.98□□□□□ -0.17
CPSF4-201ENST00000292476 FAM90A26D6RGX4 464 aa13.98□□□□□ -0.17
CPSF4-201ENST00000292476 IFNA4P05014 189 aa13.98□□□□□ -0.17
CPSF4-201ENST00000292476 PSG2P11465 335 aa13.98□□□□□ -0.17
CPSF4-201ENST00000292476 PPP1CCP36873 323 aaKnown RBP13.98□□□□□ -0.17
CPSF4-201ENST00000292476 RAB5BP61020 215 aa13.98□□□□□ -0.17
CPSF4-201ENST00000292476 CCL8P80075 99 aa13.98□□□□□ -0.17
CPSF4-201ENST00000292476 COL10A1Q03692 680 aa13.98□□□□□ -0.17
CPSF4-201ENST00000292476 TLE4Q04727 773 aa13.98□□□□□ -0.17
CPSF4-201ENST00000292476 AKR1C8PQ5T2L2 129 aa13.98□□□□□ -0.17
CPSF4-201ENST00000292476 ADGRG4Q8IZF6 3080 aa13.98□□□□□ -0.17
CPSF4-201ENST00000292476 MUC15Q8N387 334 aa13.98□□□□□ -0.17
CPSF4-201ENST00000292476 SNX22Q96L94 193 aa13.98□□□□□ -0.17
CPSF4-201ENST00000292476 PARD6GQ9BYG4 376 aaPredicted RBP13.98□□□□□ -0.17
CPSF4-201ENST00000292476 RPS10P5Q9NQ39 176 aa13.98□□□□□ -0.17
CPSF4-201ENST00000292476 CRYBG3Q68DQ2 2970 aa13.97□□□□□ -0.17
CPSF4-201ENST00000292476 C7orf77A4D0Y5 90 aa13.97□□□□□ -0.17
CPSF4-201ENST00000292476 TNFSF12O43508 249 aa13.97□□□□□ -0.17
CPSF4-201ENST00000292476 IGLV2-14P01704 120 aa13.97□□□□□ -0.17
CPSF4-201ENST00000292476 OR8U8P0C7N1 319 aa13.97□□□□□ -0.17
CPSF4-201ENST00000292476 OMGP23515 440 aa13.97□□□□□ -0.17
CPSF4-201ENST00000292476 SPSB3Q6PJ21 355 aa13.97□□□□□ -0.17
CPSF4-201ENST00000292476 ZNF561Q8N587 486 aa13.97□□□□□ -0.17
CPSF4-201ENST00000292476 OR51H1Q8NH63 302 aa13.97□□□□□ -0.17
CPSF4-201ENST00000292476 TOLLIPQ9H0E2 274 aa13.97□□□□□ -0.17
CPSF4-201ENST00000292476 COA4Q9NYJ1 87 aa13.97□□□□□ -0.17
CPSF4-201ENST00000292476 OR1A1Q9P1Q5 309 aa13.97□□□□□ -0.17
CPSF4-201ENST00000292476 RNF150Q9ULK6 438 aa13.97□□□□□ -0.17
CPSF4-201ENST00000292476 RBFOX3A6NFN3 312 aa13.96□□□□□ -0.17
CPSF4-201ENST00000292476 PSPNO60542 156 aa13.96□□□□□ -0.17
CPSF4-201ENST00000292476 CST7O76096 145 aa13.96□□□□□ -0.17
CPSF4-201ENST00000292476 GOSR1O95249 250 aa13.96□□□□□ -0.17
CPSF4-201ENST00000292476 IFNA5P01569 189 aa13.96□□□□□ -0.17
CPSF4-201ENST00000292476 RNASE11Q8TAA1 199 aaKnown RBP13.96□□□□□ -0.17
CPSF4-201ENST00000292476 HIST1H2BAQ96A08 127 aa13.96□□□□□ -0.17
CPSF4-201ENST00000292476 C14orf79Q96F83 325 aa13.96□□□□□ -0.17
CPSF4-201ENST00000292476 NCOR1P1Q9H4R4 102 aa13.96□□□□□ -0.17
CPSF4-201ENST00000292476 PKDREJQ9NTG1 2253 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 TRAV38-1A0A0B4J264 116 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 A0A0G2JRQ6 117 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 OOEPA6NGQ2 149 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 MGST3O14880 152 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 HSPB1P04792 205 aaKnown RBP13.95□□□□□ -0.18
CPSF4-201ENST00000292476 EGR1P18146 543 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 MAS1LP35410 378 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 GABRA2P47869 451 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 PPOXP50336 477 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 SOHLH1Q5JUK2 328 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 TEX36Q5VZQ5 186 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 IL1F10Q8WWZ1 152 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 CLCC1Q96S66 551 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 GPHA2Q96T91 129 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 PSMG3Q9BT73 122 aaPredicted RBP13.95□□□□□ -0.18
CPSF4-201ENST00000292476 FAM234AQ9H0X4 552 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 RAB9BQ9NP90 201 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 FBXO7Q9Y3I1 522 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 IGKV1D-17A0A075B6S4 117 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 C1orf196B1AJZ1 125 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 M0R036 132 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 SIAH2O43255 324 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 SYNGR2O43760 224 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 PLAUP00749 431 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 IGKV1-39P01597 117 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 IGKV1D-39P04432 117 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 COX6B1P14854 86 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 LOXP28300 417 aaPredicted RBP13.95□□□□□ -0.18
CPSF4-201ENST00000292476 OR3A1P47881 315 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 CEBPDP49716 269 aaPredicted RBP13.95□□□□□ -0.18
CPSF4-201ENST00000292476 KRBOX4Q5JUW0 171 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 ZNF506Q5JVG8 444 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 ZNF295-AS1Q8N0V1 137 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 CD177Q8N6Q3 437 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 TCTEX1D1Q8N7M0 179 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 OR10G4Q8NGN3 311 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 NEUROG1Q92886 237 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 MALSU1Q96EH3 234 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 ZNF665Q9H7R5 613 aa13.95□□□□□ -0.18
CPSF4-201ENST00000292476 C3orf80F5H4A9 247 aa13.94□□□□□ -0.18
CPSF4-201ENST00000292476 ZNF737O75373 536 aa13.94□□□□□ -0.18
CPSF4-201ENST00000292476 SNRNP70P08621 437 aaKnown RBP13.94□□□□□ -0.18
CPSF4-201ENST00000292476 EPHA1P21709 976 aa13.94□□□□□ -0.18
CPSF4-201ENST00000292476 HBG1P69891 147 aa13.94□□□□□ -0.18
CPSF4-201ENST00000292476 HBG2P69892 147 aa13.94□□□□□ -0.18
CPSF4-201ENST00000292476 SPRNQ5BIV9 151 aa13.94□□□□□ -0.18
CPSF4-201ENST00000292476 SDSLQ96GA7 329 aa13.94□□□□□ -0.18
CPSF4-201ENST00000292476 LURAP1Q96LR2 239 aa13.94□□□□□ -0.18
CPSF4-201ENST00000292476 CACNG5Q9UF02 275 aa13.94□□□□□ -0.18
CPSF4-201ENST00000292476 MMP24Q9Y5R2 645 aa13.94□□□□□ -0.18
CPSF4-201ENST00000292476 NKX6-3A6NJ46 265 aa13.93□□□□□ -0.18
CPSF4-201ENST00000292476 IGKV1-5P01602 117 aa13.93□□□□□ -0.18
CPSF4-201ENST00000292476 GZMHP20718 246 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms