RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 FAM71E2Q8N5Q1 922 aa21.37■■□□□ 1.01
SSU72-201ENST00000291386 ADTRPQ96IZ2 230 aa21.37■■□□□ 1.01
SSU72-201ENST00000291386 NCBP2LA6PVI3 153 aaKnown RBP21.36■■□□□ 1.01
SSU72-201ENST00000291386 DUTP33316 252 aaKnown RBP21.36■■□□□ 1.01
SSU72-201ENST00000291386 LINC00205P59089 165 aa21.36■■□□□ 1.01
SSU72-201ENST00000291386 IL18Q14116 193 aa21.36■■□□□ 1.01
SSU72-201ENST00000291386 NPBQ8NG41 125 aa21.36■■□□□ 1.01
SSU72-201ENST00000291386 RBMXL1Q96E39 390 aaKnown RBP21.36■■□□□ 1.01
SSU72-201ENST00000291386 RITA1Q96K30 269 aa21.36■■□□□ 1.01
SSU72-201ENST00000291386 RBMX2Q9Y388 322 aaKnown RBP21.36■■□□□ 1.01
SSU72-201ENST00000291386 APOA2P02652 100 aa21.35■■□□□ 1.01
SSU72-201ENST00000291386 ACTBL2Q562R1 376 aa21.35■■□□□ 1.01
SSU72-201ENST00000291386 SHISA2Q6UWI4 295 aa21.35■■□□□ 1.01
SSU72-201ENST00000291386 ZBTB34Q8NCN2 500 aa21.35■■□□□ 1.01
SSU72-201ENST00000291386 SMIM4Q8WVI0 70 aa21.35■■□□□ 1.01
SSU72-201ENST00000291386 DDB2Q92466 427 aa21.35■■□□□ 1.01
SSU72-201ENST00000291386 WNT10AQ9GZT5 417 aa21.35■■□□□ 1.01
SSU72-201ENST00000291386 ZNF107Q9UII5 783 aaPredicted RBP21.35■■□□□ 1.01
SSU72-201ENST00000291386 FABP12A6NFH5 140 aa21.34■■□□□ 1.01
SSU72-201ENST00000291386 H7C2Y5 167 aa21.34■■□□□ 1.01
SSU72-201ENST00000291386 NDUFA3O95167 84 aa21.34■■□□□ 1.01
SSU72-201ENST00000291386 S100A5P33763 92 aa21.34■■□□□ 1.01
SSU72-201ENST00000291386 DGCR2P98153 550 aa21.34■■□□□ 1.01
SSU72-201ENST00000291386 EIF4EBP1Q13541 118 aaPredicted RBP21.34■■□□□ 1.01
SSU72-201ENST00000291386 MMDQ15546 238 aa21.34■■□□□ 1.01
SSU72-201ENST00000291386 VAX1Q5SQQ9 334 aa21.34■■□□□ 1.01
SSU72-201ENST00000291386 SLC35D1Q9NTN3 355 aa21.34■■□□□ 1.01
SSU72-201ENST00000291386 SH2D7A6NKC9 451 aaPredicted RBP21.33■■□□□ 1.01
SSU72-201ENST00000291386 NBR2O15453 112 aa21.33■■□□□ 1.01
SSU72-201ENST00000291386 RRASP10301 218 aa21.33■■□□□ 1.01
SSU72-201ENST00000291386 TBPP20226 339 aa21.33■■□□□ 1.01
SSU72-201ENST00000291386 VDAC2P45880 294 aaPredicted RBP21.33■■□□□ 1.01
SSU72-201ENST00000291386 RNASE12Q5GAN4 147 aaKnown RBP21.33■■□□□ 1.01
SSU72-201ENST00000291386 OR6F1Q8NGZ6 308 aa21.33■■□□□ 1.01
SSU72-201ENST00000291386 MOB3AQ96BX8 217 aa21.33■■□□□ 1.01
SSU72-201ENST00000291386 RASL11BQ9BPW5 248 aa21.33■■□□□ 1.01
SSU72-201ENST00000291386 ZNF2Q9BSG1 426 aaPredicted RBP21.33■■□□□ 1.01
SSU72-201ENST00000291386 LINC00473A8K010 186 aa21.32■■□□□ 1
SSU72-201ENST00000291386 HAX1O00165 279 aa21.32■■□□□ 1
SSU72-201ENST00000291386 GSTZ1O43708 216 aaPredicted RBP21.32■■□□□ 1
SSU72-201ENST00000291386 IGHG2P01859 326 aa21.32■■□□□ 1
SSU72-201ENST00000291386 KRTAP10-3P60369 221 aa21.32■■□□□ 1
SSU72-201ENST00000291386 ARSJQ5FYB0 599 aaPredicted RBP21.32■■□□□ 1
SSU72-201ENST00000291386 TMEM229BQ8NBD8 167 aa21.32■■□□□ 1
SSU72-201ENST00000291386 WIPF2Q8TF74 440 aaPredicted RBP21.32■■□□□ 1
SSU72-201ENST00000291386 SECTM1Q8WVN6 248 aa21.32■■□□□ 1
SSU72-201ENST00000291386 HSD17B10Q99714 261 aaKnown RBP21.32■■□□□ 1
SSU72-201ENST00000291386 CITED1Q99966 193 aa21.32■■□□□ 1
SSU72-201ENST00000291386 CCL28Q9NRJ3 127 aa21.32■■□□□ 1
SSU72-201ENST00000291386 CD74P04233 296 aa21.31■■□□□ 1
SSU72-201ENST00000291386 IGKV1-16P04430 117 aa21.31■■□□□ 1
SSU72-201ENST00000291386 CNTFRP26992 372 aa21.31■■□□□ 1
SSU72-201ENST00000291386 HERV-K104P61576 105 aa21.31■■□□□ 1
SSU72-201ENST00000291386 ZNF66Q6ZN08 573 aa21.31■■□□□ 1
SSU72-201ENST00000291386 CCDC190Q86UF4 302 aa21.31■■□□□ 1
SSU72-201ENST00000291386 KLHDC1Q8N7A1 406 aa21.31■■□□□ 1
SSU72-201ENST00000291386 BORCS5Q969J3 196 aa21.31■■□□□ 1
SSU72-201ENST00000291386 FLYWCH2Q96CP2 140 aaKnown RBP21.31■■□□□ 1
SSU72-201ENST00000291386 SLC5A7Q9GZV3 580 aa21.31■■□□□ 1
SSU72-201ENST00000291386 A6NHS1 94 aa21.3■■□□□ 1
SSU72-201ENST00000291386 PTBP1P26599 531 aaKnown RBP eCLIP21.3■■□□□ 1
SSU72-201ENST00000291386 TAS2R19P59542 299 aa21.3■■□□□ 1
SSU72-201ENST00000291386 FXYD4P59646 89 aa21.3■■□□□ 1
SSU72-201ENST00000291386 RTL8BQ17RB0 113 aa21.3■■□□□ 1
SSU72-201ENST00000291386 C5orf64Q2M2E5 130 aa21.3■■□□□ 1
SSU72-201ENST00000291386 TMEM95Q3KNT9 176 aa21.3■■□□□ 1
SSU72-201ENST00000291386 TMEM177Q53S58 311 aa21.3■■□□□ 1
SSU72-201ENST00000291386 C9orf152Q5JTZ5 239 aa21.3■■□□□ 1
SSU72-201ENST00000291386 KIAA1456Q9P272 454 aa21.3■■□□□ 1
SSU72-201ENST00000291386 SPDEFO95238 335 aa21.29■■□□□ 1
SSU72-201ENST00000291386 CD3DP04234 171 aa21.29■■□□□ 1
SSU72-201ENST00000291386 LGALS7P47929 136 aa21.29■■□□□ 1
SSU72-201ENST00000291386 TSPAN5P62079 268 aa21.29■■□□□ 1
SSU72-201ENST00000291386 BVESQ8NE79 360 aa21.29■■□□□ 1
SSU72-201ENST00000291386 OR6Q1Q8NGQ2 317 aa21.29■■□□□ 1
SSU72-201ENST00000291386 TSNAXQ99598 290 aaKnown RBP21.29■■□□□ 1
SSU72-201ENST00000291386 V9GYH0 126 aa21.29■■□□□ 1
SSU72-201ENST00000291386 RRHO14718 337 aa21.28■■□□□ 1
SSU72-201ENST00000291386 CSF1P09603 554 aa21.28■■□□□ 1
SSU72-201ENST00000291386 GNRHRP30968 328 aa21.28■■□□□ 1
SSU72-201ENST00000291386 ETV6P41212 452 aa21.28■■□□□ 1
SSU72-201ENST00000291386 RPS16P62249 146 aaKnown RBP21.28■■□□□ 1
SSU72-201ENST00000291386 RPL30P62888 115 aaKnown RBP21.28■■□□□ 1
SSU72-201ENST00000291386 CBX3Q13185 183 aa21.28■■□□□ 1
SSU72-201ENST00000291386 RNASE10Q5GAN6 216 aaKnown RBP21.28■■□□□ 1
SSU72-201ENST00000291386 KCTD9Q7L273 389 aa21.28■■□□□ 1
SSU72-201ENST00000291386 MFSD4AQ8N468 514 aa21.28■■□□□ 1
SSU72-201ENST00000291386 ARRDC1Q8N5I2 433 aa21.28■■□□□ 1
SSU72-201ENST00000291386 TAS2R8Q9NYW2 309 aa21.28■■□□□ 1
SSU72-201ENST00000291386 PRELID3BQ9Y3B1 194 aa21.28■■□□□ 1
SSU72-201ENST00000291386 M0QYG6 137 aa21.27■■□□□ 1
SSU72-201ENST00000291386 KCNAB3O43448 404 aa21.27■■□□□ 1
SSU72-201ENST00000291386 PEX14O75381 377 aa21.27■■□□□ 1
SSU72-201ENST00000291386 HLA-DRB1P01911 266 aa21.27■■□□□ 1
SSU72-201ENST00000291386 VSIG10L2P0DP72 767 aa21.27■■□□□ 1
SSU72-201ENST00000291386 ZNF818PQ6ZRF7 136 aa21.27■■□□□ 1
SSU72-201ENST00000291386 SLC35E3Q7Z769 313 aa21.27■■□□□ 1
SSU72-201ENST00000291386 TMEM17Q86X19 198 aa21.27■■□□□ 1
SSU72-201ENST00000291386 TINAGL1Q9GZM7 467 aaPredicted RBP21.27■■□□□ 1
SSU72-201ENST00000291386 FXYD6Q9H0Q3 95 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms