RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 PLAC9Q5JTB6 97 aa6.81□□□□□ -1.32
TPM3-201ENST00000271850 TTC23Q5W5X9 447 aa6.81□□□□□ -1.32
TPM3-201ENST00000271850 TMEM91Q6ZNR0 172 aa6.81□□□□□ -1.32
TPM3-201ENST00000271850 FAM89BQ8N5H3 189 aa6.81□□□□□ -1.32
TPM3-201ENST00000271850 NEDD4LQ96PU5 975 aa6.81□□□□□ -1.32
TPM3-201ENST00000271850 TMED9Q9BVK6 235 aa6.81□□□□□ -1.32
TPM3-201ENST00000271850 RETNQ9HD89 108 aa6.81□□□□□ -1.32
TPM3-201ENST00000271850 Q9N2K0 584 aa6.81□□□□□ -1.32
TPM3-201ENST00000271850 KCNK7Q9Y2U2 307 aa6.81□□□□□ -1.32
TPM3-201ENST00000271850 H7C2Y5 167 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 MYL12BO14950 172 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 LDLRAD4O15165 306 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 SLC25A17O43808 307 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 RBBP9O75884 186 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 TRGV3P03979 118 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 TFAP2AP05549 437 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 CSN3P07498 182 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 GSTP1P09211 210 aaKnown RBP6.8□□□□□ -1.32
TPM3-201ENST00000271850 UBBP0CG47 229 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 SRMP19623 302 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 EDN2P20800 178 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 CEACAM6P40199 344 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 VEGFCP49767 419 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 MECP2P51608 486 aaKnown RBP6.8□□□□□ -1.32
TPM3-201ENST00000271850 DYRK1AQ13627 763 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 IRF3Q14653 427 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 FXYD3Q14802 87 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 PLGLAQ15195 96 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 P2RY14Q15391 338 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 HAGHQ16775 308 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 RBM48Q5RL73 367 aaKnown RBP6.8□□□□□ -1.32
TPM3-201ENST00000271850 PYHIN1Q6K0P9 492 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 LINC00322Q6ZN03 302 aaPredicted RBP6.8□□□□□ -1.32
TPM3-201ENST00000271850 DHRSXQ8N5I4 330 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 POC5Q8NA72 575 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 SETD9Q8NE22 299 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 BPIFB6Q8NFQ5 453 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 OR5T1Q8NG75 326 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 GRPEL2Q8TAA5 225 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 SETD6Q8TBK2 473 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 ABHD5Q8WTS1 349 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 PHYHIPQ92561 330 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 ARHGAP5-AS1Q96IT6 56 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 RNF5Q99942 180 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 ZMAT4Q9H898 229 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 CHCHD3Q9NX63 227 aaKnown RBP6.8□□□□□ -1.32
TPM3-201ENST00000271850 ABRACLQ9P1F3 81 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 STEAP1Q9UHE8 339 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 STUB1Q9UNE7 303 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 LRRC42Q9Y546 428 aa6.8□□□□□ -1.32
TPM3-201ENST00000271850 SHISA3A0PJX4 238 aa6.79□□□□□ -1.32
TPM3-201ENST00000271850 ANKRD34BA5PLL1 514 aa6.79□□□□□ -1.32
TPM3-201ENST00000271850 SPDEFO95238 335 aa6.79□□□□□ -1.32
TPM3-201ENST00000271850 BPNT1O95861 308 aa6.79□□□□□ -1.32
TPM3-201ENST00000271850 CDK1P06493 297 aa6.79□□□□□ -1.32
TPM3-201ENST00000271850 MAPK3P27361 379 aaPredicted RBP6.79□□□□□ -1.32
TPM3-201ENST00000271850 MC5RP33032 325 aa6.79□□□□□ -1.32
TPM3-201ENST00000271850 CLDN12P56749 244 aa6.79□□□□□ -1.32
TPM3-201ENST00000271850 SYNJ2BPP57105 145 aa6.79□□□□□ -1.32
TPM3-201ENST00000271850 RPS25P62851 125 aaKnown RBP6.79□□□□□ -1.32
TPM3-201ENST00000271850 TMEM267Q0VDI3 215 aaPredicted RBP6.79□□□□□ -1.32
TPM3-201ENST00000271850 KRTAP19-4Q3LI73 84 aa6.79□□□□□ -1.32
TPM3-201ENST00000271850 MOGAT2Q3SYC2 334 aa6.79□□□□□ -1.32
TPM3-201ENST00000271850 OGFRL1Q5TC84 451 aaPredicted RBP6.79□□□□□ -1.32
TPM3-201ENST00000271850 RNLSQ5VYX0 342 aa6.79□□□□□ -1.32
TPM3-201ENST00000271850 GLT8D1Q68CQ7 371 aa6.79□□□□□ -1.32
TPM3-201ENST00000271850 MOB1BQ7L9L4 216 aa6.79□□□□□ -1.32
TPM3-201ENST00000271850 CEACAM19Q7Z692 300 aa6.79□□□□□ -1.32
TPM3-201ENST00000271850 PACRGLQ8N7B6 248 aa6.79□□□□□ -1.32
TPM3-201ENST00000271850 OR9G4Q8NGQ1 327 aa6.79□□□□□ -1.32
TPM3-201ENST00000271850 KCNG3Q8TAE7 436 aa6.79□□□□□ -1.32
TPM3-201ENST00000271850 FLYWCH2Q96CP2 140 aaKnown RBP6.79□□□□□ -1.32
TPM3-201ENST00000271850 OR4C12Q96R67 309 aa6.79□□□□□ -1.32
TPM3-201ENST00000271850 RSRP1Q9BUV0 290 aa6.79□□□□□ -1.32
TPM3-201ENST00000271850 PECRQ9BY49 303 aa6.79□□□□□ -1.32
TPM3-201ENST00000271850 GHITMQ9H3K2 345 aa6.79□□□□□ -1.32
TPM3-201ENST00000271850 SLA2Q9H6Q3 261 aa6.79□□□□□ -1.32
TPM3-201ENST00000271850 CHMP1AQ9HD42 196 aaPredicted RBP6.79□□□□□ -1.32
TPM3-201ENST00000271850 PLEKHJ1Q9NW61 149 aa6.79□□□□□ -1.32
TPM3-201ENST00000271850 SDHAF2Q9NX18 166 aa6.79□□□□□ -1.32
TPM3-201ENST00000271850 RDH8Q9NYR8 311 aa6.79□□□□□ -1.32
TPM3-201ENST00000271850 IGKV1D-8A0A087WSZ0 117 aa6.78□□□□□ -1.32
TPM3-201ENST00000271850 H3BUA1 57 aa6.78□□□□□ -1.32
TPM3-201ENST00000271850 SLC17A2O00624 439 aa6.78□□□□□ -1.32
TPM3-201ENST00000271850 CASQ2O14958 399 aaPredicted RBP6.78□□□□□ -1.32
TPM3-201ENST00000271850 BRI3O95415 125 aa6.78□□□□□ -1.32
TPM3-201ENST00000271850 APELAP0DMC3 54 aa6.78□□□□□ -1.32
TPM3-201ENST00000271850 ARSBP15848 533 aa6.78□□□□□ -1.32
TPM3-201ENST00000271850 CPEP16870 476 aa6.78□□□□□ -1.32
TPM3-201ENST00000271850 ZBTB25P24278 435 aa6.78□□□□□ -1.32
TPM3-201ENST00000271850 RPS16P62249 146 aaKnown RBP6.78□□□□□ -1.32
TPM3-201ENST00000271850 ZNF45Q02386 682 aa6.78□□□□□ -1.32
TPM3-201ENST00000271850 MED21Q13503 144 aa6.78□□□□□ -1.32
TPM3-201ENST00000271850 RCN1Q15293 331 aa6.78□□□□□ -1.32
TPM3-201ENST00000271850 HSD17B12Q53GQ0 312 aa6.78□□□□□ -1.32
TPM3-201ENST00000271850 IGSF11Q5DX21 431 aa6.78□□□□□ -1.32
TPM3-201ENST00000271850 LIPKQ5VXJ0 399 aa6.78□□□□□ -1.32
TPM3-201ENST00000271850 ZNF343Q6P1L6 599 aa6.78□□□□□ -1.32
TPM3-201ENST00000271850 PDPNQ86YL7 162 aa6.78□□□□□ -1.32
TPM3-201ENST00000271850 C8orf59Q8N0T1 100 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms