RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 OR8U8P0C7N1 319 aa7.54□□□□□ -1.2
VPS41-201ENST00000265745 RANBP1P43487 201 aa7.54□□□□□ -1.2
VPS41-201ENST00000265745 GNB1P62873 340 aa7.54□□□□□ -1.2
VPS41-201ENST00000265745 ZNF616Q08AN1 781 aa7.54□□□□□ -1.2
VPS41-201ENST00000265745 PLA2G7Q13093 441 aa7.54□□□□□ -1.2
VPS41-201ENST00000265745 PSG5Q15238 335 aa7.54□□□□□ -1.2
VPS41-201ENST00000265745 ZNF260Q3ZCT1 412 aa7.54□□□□□ -1.2
VPS41-201ENST00000265745 CD200R1LQ6Q8B3 271 aa7.54□□□□□ -1.2
VPS41-201ENST00000265745 ZNF562Q6V9R5 426 aa7.54□□□□□ -1.2
VPS41-201ENST00000265745 OR56B1Q8NGI3 324 aa7.54□□□□□ -1.2
VPS41-201ENST00000265745 CMSS1Q9BQ75 279 aaKnown RBP7.54□□□□□ -1.2
VPS41-201ENST00000265745 RAB22AQ9UL26 194 aa7.54□□□□□ -1.2
VPS41-201ENST00000265745 FOXA2Q9Y261 457 aaPredicted RBP7.54□□□□□ -1.2
VPS41-201ENST00000265745 KCNK7Q9Y2U2 307 aa7.54□□□□□ -1.2
VPS41-201ENST00000265745 TENM3Q9P273 2699 aa7.54□□□□□ -1.2
VPS41-201ENST00000265745 TMEM272A0A1B0GTI8 110 aa7.53□□□□□ -1.2
VPS41-201ENST00000265745 TRDCB7Z8K6 153 aa7.53□□□□□ -1.2
VPS41-201ENST00000265745 DENRO43583 198 aaKnown RBP7.53□□□□□ -1.2
VPS41-201ENST00000265745 IGKV1-16P04430 117 aa7.53□□□□□ -1.2
VPS41-201ENST00000265745 INSL3P51460 131 aa7.53□□□□□ -1.2
VPS41-201ENST00000265745 SCAND1P57086 179 aa7.53□□□□□ -1.2
VPS41-201ENST00000265745 LINC00205P59089 165 aa7.53□□□□□ -1.2
VPS41-201ENST00000265745 TMEM267Q0VDI3 215 aaPredicted RBP7.53□□□□□ -1.2
VPS41-201ENST00000265745 PLGLAQ15195 96 aa7.53□□□□□ -1.2
VPS41-201ENST00000265745 ECSCRQ19T08 205 aa7.53□□□□□ -1.2
VPS41-201ENST00000265745 AKIRIN2Q53H80 203 aa7.53□□□□□ -1.2
VPS41-201ENST00000265745 TCTEX1D1Q8N7M0 179 aa7.53□□□□□ -1.2
VPS41-201ENST00000265745 ZNF383Q8NA42 475 aa7.53□□□□□ -1.2
VPS41-201ENST00000265745 PRR25Q96S07 402 aa7.53□□□□□ -1.2
VPS41-201ENST00000265745 TOLLIPQ9H0E2 274 aa7.53□□□□□ -1.2
VPS41-201ENST00000265745 RDH8Q9NYR8 311 aa7.53□□□□□ -1.2
VPS41-201ENST00000265745 ZNF221Q9UK13 617 aa7.53□□□□□ -1.2
VPS41-201ENST00000265745 GAB2Q9UQC2 676 aa7.53□□□□□ -1.2
VPS41-201ENST00000265745 A3GALT2U3KPV4 340 aa7.53□□□□□ -1.2
VPS41-201ENST00000265745 NBEAL2Q6ZNJ1 2754 aa7.52□□□□□ -1.21
VPS41-201ENST00000265745 TRAV1-2A0A0B4J238 106 aa7.52□□□□□ -1.21
VPS41-201ENST00000265745 A0A1W2PN81 502 aa7.52□□□□□ -1.21
VPS41-201ENST00000265745 TFAP2AP05549 437 aa7.52□□□□□ -1.21
VPS41-201ENST00000265745 NHLRC4P0CG21 123 aaPredicted RBP7.52□□□□□ -1.21
VPS41-201ENST00000265745 CHRNA7P36544 502 aa7.52□□□□□ -1.21
VPS41-201ENST00000265745 SERPINB10P48595 397 aa7.52□□□□□ -1.21
VPS41-201ENST00000265745 RPS16P62249 146 aaKnown RBP7.52□□□□□ -1.21
VPS41-201ENST00000265745 ODF1Q14990 250 aa7.52□□□□□ -1.21
VPS41-201ENST00000265745 TBCEQ15813 527 aaPredicted RBP7.52□□□□□ -1.21
VPS41-201ENST00000265745 SSX1Q16384 188 aa7.52□□□□□ -1.21
VPS41-201ENST00000265745 MOGAT2Q3SYC2 334 aa7.52□□□□□ -1.21
VPS41-201ENST00000265745 ACTBL2Q562R1 376 aa7.52□□□□□ -1.21
VPS41-201ENST00000265745 HES5Q5TA89 166 aa7.52□□□□□ -1.21
VPS41-201ENST00000265745 PPP1R27Q86WC6 154 aa7.52□□□□□ -1.21
VPS41-201ENST00000265745 Q8N1Y9 231 aa7.52□□□□□ -1.21
VPS41-201ENST00000265745 OR4A4PQ8NGN8 299 aa7.52□□□□□ -1.21
VPS41-201ENST00000265745 CASTOR1Q8WTX7 329 aa7.52□□□□□ -1.21
VPS41-201ENST00000265745 DCUN1D4Q92564 292 aa7.52□□□□□ -1.21
VPS41-201ENST00000265745 DLX4Q92988 240 aaPredicted RBP7.52□□□□□ -1.21
VPS41-201ENST00000265745 RAB3CQ96E17 227 aa7.52□□□□□ -1.21
VPS41-201ENST00000265745 CLCC1Q96S66 551 aa7.52□□□□□ -1.21
VPS41-201ENST00000265745 TSNAXQ99598 290 aaKnown RBP7.52□□□□□ -1.21
VPS41-201ENST00000265745 FAM103A1Q9BTL3 118 aaKnown RBP7.52□□□□□ -1.21
VPS41-201ENST00000265745 ALX4Q9H161 411 aaPredicted RBP7.52□□□□□ -1.21
VPS41-201ENST00000265745 VCX3BQ9H321 246 aa7.52□□□□□ -1.21
VPS41-201ENST00000265745 TPSG1Q9NRR2 321 aa7.52□□□□□ -1.21
VPS41-201ENST00000265745 METTL1Q9UBP6 276 aaKnown RBP7.52□□□□□ -1.21
VPS41-201ENST00000265745 TRDV1A0A1B0GX56 115 aa7.51□□□□□ -1.21
VPS41-201ENST00000265745 IFITM5A6NNB3 132 aa7.51□□□□□ -1.21
VPS41-201ENST00000265745 LINC01619G3V211 115 aa7.51□□□□□ -1.21
VPS41-201ENST00000265745 RAB27BO00194 218 aa7.51□□□□□ -1.21
VPS41-201ENST00000265745 PDCD5O14737 125 aa7.51□□□□□ -1.21
VPS41-201ENST00000265745 OVOL1O14753 267 aa7.51□□□□□ -1.21
VPS41-201ENST00000265745 FABP7O15540 132 aa7.51□□□□□ -1.21
VPS41-201ENST00000265745 SPDEFO95238 335 aa7.51□□□□□ -1.21
VPS41-201ENST00000265745 FCGR3AP08637 254 aa7.51□□□□□ -1.21
VPS41-201ENST00000265745 CD3GP09693 182 aa7.51□□□□□ -1.21
VPS41-201ENST00000265745 OR8U9P0C7N5 309 aa7.51□□□□□ -1.21
VPS41-201ENST00000265745 GSTT2P0CG29 244 aa7.51□□□□□ -1.21
VPS41-201ENST00000265745 GSTT2BP0CG30 244 aa7.51□□□□□ -1.21
VPS41-201ENST00000265745 HSPA13P48723 471 aa7.51□□□□□ -1.21
VPS41-201ENST00000265745 OR10A3P58181 314 aa7.51□□□□□ -1.21
VPS41-201ENST00000265745 IGSF11Q5DX21 431 aa7.51□□□□□ -1.21
VPS41-201ENST00000265745 PYHIN1Q6K0P9 492 aa7.51□□□□□ -1.21
VPS41-201ENST00000265745 UNQ5815/PRO19632Q6UWF5 114 aa7.51□□□□□ -1.21
VPS41-201ENST00000265745 IZUMO2Q6UXV1 221 aa7.51□□□□□ -1.21
VPS41-201ENST00000265745 ZNF367Q7RTV3 350 aa7.51□□□□□ -1.21
VPS41-201ENST00000265745 ZNF429Q86V71 674 aa7.51□□□□□ -1.21
VPS41-201ENST00000265745 PDPNQ86YL7 162 aa7.51□□□□□ -1.21
VPS41-201ENST00000265745 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.51□□□□□ -1.21
VPS41-201ENST00000265745 LFNGQ8NES3 379 aa7.51□□□□□ -1.21
VPS41-201ENST00000265745 OR10R2Q8NGX6 335 aa7.51□□□□□ -1.21
VPS41-201ENST00000265745 ABHD5Q8WTS1 349 aa7.51□□□□□ -1.21
VPS41-201ENST00000265745 FLYWCH2Q96CP2 140 aaKnown RBP7.51□□□□□ -1.21
VPS41-201ENST00000265745 CNBD2Q96M20 576 aa7.51□□□□□ -1.21
VPS41-201ENST00000265745 WWC2-AS2Q96NR7 200 aa7.51□□□□□ -1.21
VPS41-201ENST00000265745 ZNF256Q9Y2P7 627 aaPredicted RBP7.51□□□□□ -1.21
VPS41-201ENST00000265745 IGHV4OR15-8A0A075B7B6 117 aa7.5□□□□□ -1.21
VPS41-201ENST00000265745 A0A087WW49 117 aa7.5□□□□□ -1.21
VPS41-201ENST00000265745 TRBV6-7A0A0A0MS04 114 aa7.5□□□□□ -1.21
VPS41-201ENST00000265745 M0R1X1 148 aa7.5□□□□□ -1.21
VPS41-201ENST00000265745 MFNGO00587 321 aa7.5□□□□□ -1.21
VPS41-201ENST00000265745 ARPC1BO15143 372 aaKnown RBP7.5□□□□□ -1.21
VPS41-201ENST00000265745 SLC25A17O43808 307 aa7.5□□□□□ -1.21
VPS41-201ENST00000265745 DIRAS3O95661 229 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms