RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 RAB1BQ9H0U4 201 aa13□□□□□ -0.33
VPS26A-201ENST00000263559 DOCK11Q5JSL3 2073 aa13□□□□□ -0.33
VPS26A-201ENST00000263559 SAA2-SAA4A0A096LPE2 208 aa12.99□□□□□ -0.33
VPS26A-201ENST00000263559 FCGR3BO75015 233 aa12.99□□□□□ -0.33
VPS26A-201ENST00000263559 JTBO76095 146 aa12.99□□□□□ -0.33
VPS26A-201ENST00000263559 LY6HO94772 140 aa12.99□□□□□ -0.33
VPS26A-201ENST00000263559 SAA2P0DJI9 122 aaPredicted RBP12.99□□□□□ -0.33
VPS26A-201ENST00000263559 TMEM30BQ3MIR4 351 aa12.99□□□□□ -0.33
VPS26A-201ENST00000263559 ZNF295-AS1Q8N0V1 137 aa12.99□□□□□ -0.33
VPS26A-201ENST00000263559 LYG1Q8N1E2 194 aa12.99□□□□□ -0.33
VPS26A-201ENST00000263559 TMEM252Q8N6L7 170 aa12.99□□□□□ -0.33
VPS26A-201ENST00000263559 ZNF251Q9BRH9 671 aa12.99□□□□□ -0.33
VPS26A-201ENST00000263559 CACNA1BQ00975 2339 aa12.99□□□□□ -0.33
VPS26A-201ENST00000263559 CFAP46Q8IYW2 2715 aa12.99□□□□□ -0.33
VPS26A-201ENST00000263559 ATG12O94817 140 aa12.99□□□□□ -0.33
VPS26A-201ENST00000263559 DANCRP0C864 163 aa12.99□□□□□ -0.33
VPS26A-201ENST00000263559 EIF5AP63241 154 aaKnown RBP12.99□□□□□ -0.33
VPS26A-201ENST00000263559 CD300LFQ8TDQ1 290 aa12.99□□□□□ -0.33
VPS26A-201ENST00000263559 COA4Q9NYJ1 87 aa12.99□□□□□ -0.33
VPS26A-201ENST00000263559 DCHS2Q6V1P9 2916 aa12.99□□□□□ -0.33
VPS26A-201ENST00000263559 RAB29O14966 203 aa12.98□□□□□ -0.33
VPS26A-201ENST00000263559 SYNGR2O43760 224 aa12.98□□□□□ -0.33
VPS26A-201ENST00000263559 MRPS11P82912 194 aaKnown RBP12.98□□□□□ -0.33
VPS26A-201ENST00000263559 HEPN1Q6WQI6 88 aa12.98□□□□□ -0.33
VPS26A-201ENST00000263559 OR10A7Q8NGE5 316 aa12.98□□□□□ -0.33
VPS26A-201ENST00000263559 SLC25A31Q9H0C2 315 aa12.98□□□□□ -0.33
VPS26A-201ENST00000263559 LAMP3Q9UQV4 416 aa12.98□□□□□ -0.33
VPS26A-201ENST00000263559 TEX46H3BTG2 121 aa12.98□□□□□ -0.33
VPS26A-201ENST00000263559 IGHV2-70P01814 119 aa12.98□□□□□ -0.33
VPS26A-201ENST00000263559 MIDNQ504T8 468 aa12.98□□□□□ -0.33
VPS26A-201ENST00000263559 SLC25A48Q6ZT89 311 aaKnown RBP12.98□□□□□ -0.33
VPS26A-201ENST00000263559 UBAC2Q8NBM4 344 aa12.98□□□□□ -0.33
VPS26A-201ENST00000263559 ZNRD1Q9P1U0 126 aa12.98□□□□□ -0.33
VPS26A-201ENST00000263559 LPAR3Q9UBY5 353 aa12.98□□□□□ -0.33
VPS26A-201ENST00000263559 TOR1AO14656 332 aa12.97□□□□□ -0.33
VPS26A-201ENST00000263559 AVPI1Q5T686 147 aa12.97□□□□□ -0.33
VPS26A-201ENST00000263559 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.97□□□□□ -0.33
VPS26A-201ENST00000263559 RAB40CQ96S21 281 aa12.97□□□□□ -0.33
VPS26A-201ENST00000263559 REG4Q9BYZ8 158 aa12.97□□□□□ -0.33
VPS26A-201ENST00000263559 MED9Q9NWA0 146 aa12.97□□□□□ -0.33
VPS26A-201ENST00000263559 RALYQ9UKM9 306 aaKnown RBP12.97□□□□□ -0.33
VPS26A-201ENST00000263559 USP24Q9UPU5 2620 aa12.97□□□□□ -0.33
VPS26A-201ENST00000263559 MARCH11A6NNE9 402 aa12.97□□□□□ -0.33
VPS26A-201ENST00000263559 FSTL3O95633 263 aa12.97□□□□□ -0.33
VPS26A-201ENST00000263559 HPRT1P00492 218 aa12.97□□□□□ -0.33
VPS26A-201ENST00000263559 DAOP14920 347 aa12.97□□□□□ -0.33
VPS26A-201ENST00000263559 H2BFWTQ7Z2G1 175 aa12.97□□□□□ -0.33
VPS26A-201ENST00000263559 DDB2Q92466 427 aa12.97□□□□□ -0.33
VPS26A-201ENST00000263559 R3HDM4Q96D70 268 aa12.97□□□□□ -0.33
VPS26A-201ENST00000263559 S1PR3Q99500 378 aa12.97□□□□□ -0.33
VPS26A-201ENST00000263559 BARX1Q9HBU1 254 aaPredicted RBP12.97□□□□□ -0.33
VPS26A-201ENST00000263559 PRELID3BQ9Y3B1 194 aa12.97□□□□□ -0.33
VPS26A-201ENST00000263559 H3BP45 60 aa12.96□□□□□ -0.33
VPS26A-201ENST00000263559 FGF16O43320 207 aa12.96□□□□□ -0.33
VPS26A-201ENST00000263559 FBXO24O75426 580 aa12.96□□□□□ -0.33
VPS26A-201ENST00000263559 CST7O76096 145 aa12.96□□□□□ -0.33
VPS26A-201ENST00000263559 FAM157CP0CG43 387 aa12.96□□□□□ -0.33
VPS26A-201ENST00000263559 IAPPP10997 89 aa12.96□□□□□ -0.33
VPS26A-201ENST00000263559 RPL23AP62750 156 aaKnown RBP12.96□□□□□ -0.33
VPS26A-201ENST00000263559 DTX2Q86UW9 622 aa12.96□□□□□ -0.33
VPS26A-201ENST00000263559 AANATQ16613 207 aa12.96□□□□□ -0.33
VPS26A-201ENST00000263559 ZNF841Q6ZN19 808 aa12.96□□□□□ -0.33
VPS26A-201ENST00000263559 RNF141Q8WVD5 230 aa12.96□□□□□ -0.33
VPS26A-201ENST00000263559 ARV1Q9H2C2 271 aa12.96□□□□□ -0.33
VPS26A-201ENST00000263559 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.96□□□□□ -0.33
VPS26A-201ENST00000263559 PFDN2Q9UHV9 154 aa12.96□□□□□ -0.33
VPS26A-201ENST00000263559 WSB1Q9Y6I7 421 aa12.96□□□□□ -0.33
VPS26A-201ENST00000263559 BORCS7-ASMTA0A0B4J1R7 106 aa12.96□□□□□ -0.34
VPS26A-201ENST00000263559 FAM90A26D6RGX4 464 aa12.96□□□□□ -0.34
VPS26A-201ENST00000263559 RBFOX2O43251 390 aaKnown RBP eCLIP12.96□□□□□ -0.34
VPS26A-201ENST00000263559 DLX6P56179 175 aa12.96□□□□□ -0.34
VPS26A-201ENST00000263559 UBE2KP61086 200 aa12.96□□□□□ -0.34
VPS26A-201ENST00000263559 CLINT1Q14677 625 aa12.96□□□□□ -0.34
VPS26A-201ENST00000263559 TXNL1O43396 289 aa12.95□□□□□ -0.34
VPS26A-201ENST00000263559 TNFRSF9Q07011 255 aa12.95□□□□□ -0.34
VPS26A-201ENST00000263559 TMEM155Q4W5P6 130 aa12.95□□□□□ -0.34
VPS26A-201ENST00000263559 TMEM217Q8N7C4 229 aa12.95□□□□□ -0.34
VPS26A-201ENST00000263559 OR5C1Q8NGR4 320 aa12.95□□□□□ -0.34
VPS26A-201ENST00000263559 PLA2G2EQ9NZK7 142 aa12.95□□□□□ -0.34
VPS26A-201ENST00000263559 HSPB7Q9UBY9 170 aa12.95□□□□□ -0.34
VPS26A-201ENST00000263559 MFSD2BA6NFX1 497 aa12.95□□□□□ -0.34
VPS26A-201ENST00000263559 IGFBP2P18065 325 aa12.95□□□□□ -0.34
VPS26A-201ENST00000263559 THBS3P49746 956 aa12.95□□□□□ -0.34
VPS26A-201ENST00000263559 DYNLT3P51808 116 aa12.95□□□□□ -0.34
VPS26A-201ENST00000263559 EIF5AL1Q6IS14 154 aaKnown RBP12.95□□□□□ -0.34
VPS26A-201ENST00000263559 ZNF383Q8NA42 475 aa12.95□□□□□ -0.34
VPS26A-201ENST00000263559 NEU4Q8WWR8 484 aaPredicted RBP12.95□□□□□ -0.34
VPS26A-201ENST00000263559 RBKSQ9H477 322 aa12.95□□□□□ -0.34
VPS26A-201ENST00000263559 PSENENQ9NZ42 101 aa12.95□□□□□ -0.34
VPS26A-201ENST00000263559 OR9G9P0C7N8 305 aa12.94□□□□□ -0.34
VPS26A-201ENST00000263559 KIR2DS2P43631 304 aa12.94□□□□□ -0.34
VPS26A-201ENST00000263559 BAXQ07812 192 aa12.94□□□□□ -0.34
VPS26A-201ENST00000263559 SSX9Q7RTT3 188 aa12.94□□□□□ -0.34
VPS26A-201ENST00000263559 VKORC1L1Q8N0U8 176 aa12.94□□□□□ -0.34
VPS26A-201ENST00000263559 LRRC20Q8TCA0 184 aa12.94□□□□□ -0.34
VPS26A-201ENST00000263559 RBMXL1Q96E39 390 aaKnown RBP12.94□□□□□ -0.34
VPS26A-201ENST00000263559 SMIM8Q96KF7 97 aa12.94□□□□□ -0.34
VPS26A-201ENST00000263559 TMEM267Q0VDI3 215 aaPredicted RBP12.94□□□□□ -0.34
VPS26A-201ENST00000263559 GINS3Q9BRX5 216 aa12.94□□□□□ -0.34
VPS26A-201ENST00000263559 MALRD1Q5VYJ5 2156 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms