RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 LIN7CQ9NUP9 197 aaKnown RBP13.85□□□□□ -0.19
ZNF541-201ENST00000263351 NAT8Q9UHE5 227 aa13.85□□□□□ -0.19
ZNF541-201ENST00000263351 TET2Q6N021 2002 aaPredicted RBP13.85□□□□□ -0.19
ZNF541-201ENST00000263351 PMS2P5A8MQ11 134 aa13.85□□□□□ -0.19
ZNF541-201ENST00000263351 H7BYZ3 331 aa13.85□□□□□ -0.19
ZNF541-201ENST00000263351 KBTBD11O94819 623 aa13.85□□□□□ -0.19
ZNF541-201ENST00000263351 MPLP40238 635 aa13.85□□□□□ -0.19
ZNF541-201ENST00000263351 PNRC1Q12796 327 aaPredicted RBP13.85□□□□□ -0.19
ZNF541-201ENST00000263351 OR13D1Q8NGV5 346 aa13.85□□□□□ -0.19
ZNF541-201ENST00000263351 RIMS4Q9H426 269 aaPredicted RBP13.85□□□□□ -0.19
ZNF541-201ENST00000263351 PATZ1Q9HBE1 687 aaKnown RBP13.85□□□□□ -0.19
ZNF541-201ENST00000263351 MPC1Q9Y5U8 109 aa13.85□□□□□ -0.19
ZNF541-201ENST00000263351 CSMD1Q96PZ7 3565 aa13.84□□□□□ -0.19
ZNF541-201ENST00000263351 ELOA3CA0A087WX78 387 aaPredicted RBP13.84□□□□□ -0.19
ZNF541-201ENST00000263351 A0A0U1RQK1 487 aa13.84□□□□□ -0.19
ZNF541-201ENST00000263351 OR5B21A6NL26 309 aa13.84□□□□□ -0.19
ZNF541-201ENST00000263351 NUPR1O60356 82 aa13.84□□□□□ -0.19
ZNF541-201ENST00000263351 OPN1MWP04001 364 aa13.84□□□□□ -0.19
ZNF541-201ENST00000263351 OPN1MW2P0DN77 364 aa13.84□□□□□ -0.19
ZNF541-201ENST00000263351 OPN1MW3P0DN78 364 aa13.84□□□□□ -0.19
ZNF541-201ENST00000263351 ARR3P36575 388 aa13.84□□□□□ -0.19
ZNF541-201ENST00000263351 MEOX1P50221 254 aa13.84□□□□□ -0.19
ZNF541-201ENST00000263351 TRA2AQ13595 282 aaKnown RBP eCLIP13.84□□□□□ -0.19
ZNF541-201ENST00000263351 ALKBH2Q6NS38 261 aa13.84□□□□□ -0.19
ZNF541-201ENST00000263351 CYP2G1PQ6ZSU1 146 aa13.84□□□□□ -0.19
ZNF541-201ENST00000263351 TCF23Q7RTU1 214 aa13.84□□□□□ -0.19
ZNF541-201ENST00000263351 OR1P1Q8NH06 330 aa13.84□□□□□ -0.19
ZNF541-201ENST00000263351 HIPK2Q9H2X6 1198 aa13.84□□□□□ -0.19
ZNF541-201ENST00000263351 GYPAP02724 150 aa13.84□□□□□ -0.19
ZNF541-201ENST00000263351 OR4A8P0C604 315 aa13.84□□□□□ -0.19
ZNF541-201ENST00000263351 C1QTNF9P0C862 333 aa13.84□□□□□ -0.19
ZNF541-201ENST00000263351 SERF2P84101 59 aa13.84□□□□□ -0.19
ZNF541-201ENST00000263351 SNIP1Q8TAD8 396 aaKnown RBP13.84□□□□□ -0.19
ZNF541-201ENST00000263351 MSL2Q9HCI7 577 aa13.84□□□□□ -0.19
ZNF541-201ENST00000263351 SPRR3Q9UBC9 169 aa13.84□□□□□ -0.19
ZNF541-201ENST00000263351 EP300Q09472 2414 aaPredicted RBP13.84□□□□□ -0.19
ZNF541-201ENST00000263351 COL27A1Q8IZC6 1860 aaPredicted RBP13.84□□□□□ -0.19
ZNF541-201ENST00000263351 TNCP24821 2201 aa13.83□□□□□ -0.19
ZNF541-201ENST00000263351 LRP5LA4QPB2 252 aa13.83□□□□□ -0.19
ZNF541-201ENST00000263351 SMPD2O60906 423 aa13.83□□□□□ -0.19
ZNF541-201ENST00000263351 HAND1O96004 215 aa13.83□□□□□ -0.19
ZNF541-201ENST00000263351 HBZP02008 142 aa13.83□□□□□ -0.19
ZNF541-201ENST00000263351 SLC25A6P12236 298 aa13.83□□□□□ -0.19
ZNF541-201ENST00000263351 GABRA2P47869 451 aa13.83□□□□□ -0.19
ZNF541-201ENST00000263351 EDDM3BP56851 147 aa13.83□□□□□ -0.19
ZNF541-201ENST00000263351 ERVK11-1P61568 191 aa13.83□□□□□ -0.19
ZNF541-201ENST00000263351 PSG7Q13046 419 aa13.83□□□□□ -0.19
ZNF541-201ENST00000263351 NRN1LQ496H8 165 aa13.83□□□□□ -0.19
ZNF541-201ENST00000263351 TMEM183AQ8IXX5 376 aa13.83□□□□□ -0.19
ZNF541-201ENST00000263351 BCL2L2Q92843 193 aaPredicted RBP13.83□□□□□ -0.19
ZNF541-201ENST00000263351 COQ2Q96H96 371 aa13.83□□□□□ -0.19
ZNF541-201ENST00000263351 NPCDR1Q9BY65 106 aa13.83□□□□□ -0.19
ZNF541-201ENST00000263351 PPP1CBP62140 327 aa13.83□□□□□ -0.2
ZNF541-201ENST00000263351 SSX2Q16385 188 aa13.83□□□□□ -0.2
ZNF541-201ENST00000263351 Q3ZCU0 254 aa13.83□□□□□ -0.2
ZNF541-201ENST00000263351 DTD1Q8TEA8 209 aa13.83□□□□□ -0.2
ZNF541-201ENST00000263351 LRRC30A6NM36 301 aa13.82□□□□□ -0.2
ZNF541-201ENST00000263351 MLNRO43193 412 aa13.82□□□□□ -0.2
ZNF541-201ENST00000263351 TDGF1P13385 188 aa13.82□□□□□ -0.2
ZNF541-201ENST00000263351 TGFBR3Q03167 851 aa13.82□□□□□ -0.2
ZNF541-201ENST00000263351 DCAF10Q5QP82 559 aa13.82□□□□□ -0.2
ZNF541-201ENST00000263351 FAM78BQ5VT40 261 aa13.82□□□□□ -0.2
ZNF541-201ENST00000263351 GTF3AQ92664 365 aaKnown RBP13.82□□□□□ -0.2
ZNF541-201ENST00000263351 ATG101Q9BSB4 218 aa13.82□□□□□ -0.2
ZNF541-201ENST00000263351 QTRT1Q9BXR0 403 aaKnown RBP13.82□□□□□ -0.2
ZNF541-201ENST00000263351 SRD5A3Q9H8P0 318 aa13.82□□□□□ -0.2
ZNF541-201ENST00000263351 TMEM242Q9NWH2 141 aa13.82□□□□□ -0.2
ZNF541-201ENST00000263351 HSPB7Q9UBY9 170 aa13.82□□□□□ -0.2
ZNF541-201ENST00000263351 PITPNC1Q9UKF7 332 aa13.82□□□□□ -0.2
ZNF541-201ENST00000263351 FRMD6-AS1P0C7T7 363 aa13.82□□□□□ -0.2
ZNF541-201ENST00000263351 COX5BP10606 129 aa13.82□□□□□ -0.2
ZNF541-201ENST00000263351 PSMB3P49720 205 aa13.82□□□□□ -0.2
ZNF541-201ENST00000263351 NUBP1P53384 320 aa13.82□□□□□ -0.2
ZNF541-201ENST00000263351 PMS2P11Q13670 270 aa13.82□□□□□ -0.2
ZNF541-201ENST00000263351 EDDM3AQ14507 147 aa13.82□□□□□ -0.2
ZNF541-201ENST00000263351 OR13A1Q8NGR1 328 aa13.82□□□□□ -0.2
ZNF541-201ENST00000263351 RTL8AQ9BWD3 113 aa13.82□□□□□ -0.2
ZNF541-201ENST00000263351 OBP2BQ9NPH6 170 aa13.82□□□□□ -0.2
ZNF541-201ENST00000263351 MBNL3Q9NUK0 354 aaKnown RBP13.82□□□□□ -0.2
ZNF541-201ENST00000263351 PSG11Q9UQ72 335 aa13.82□□□□□ -0.2
ZNF541-201ENST00000263351 PPP5D1E7EU14 171 aa13.81□□□□□ -0.2
ZNF541-201ENST00000263351 SELLP14151 372 aa13.81□□□□□ -0.2
ZNF541-201ENST00000263351 CST9LP1Q5W188 147 aa13.81□□□□□ -0.2
ZNF541-201ENST00000263351 TMEM256Q8N2U0 113 aa13.81□□□□□ -0.2
ZNF541-201ENST00000263351 P2RX4Q99571 388 aa13.81□□□□□ -0.2
ZNF541-201ENST00000263351 PKIBQ9C010 78 aa13.81□□□□□ -0.2
ZNF541-201ENST00000263351 B4GALT7Q9UBV7 327 aa13.81□□□□□ -0.2
ZNF541-201ENST00000263351 CNOT1A5YKK6 2376 aaKnown RBP13.81□□□□□ -0.2
ZNF541-201ENST00000263351 INTS1Q8N201 2190 aaKnown RBP13.81□□□□□ -0.2
ZNF541-201ENST00000263351 OR9G9P0C7N8 305 aa13.81□□□□□ -0.2
ZNF541-201ENST00000263351 DUSP3P51452 185 aaPredicted RBP13.81□□□□□ -0.2
ZNF541-201ENST00000263351 PKIAP61925 76 aa13.81□□□□□ -0.2
ZNF541-201ENST00000263351 Q8N7P7 452 aa13.81□□□□□ -0.2
ZNF541-201ENST00000263351 MRPS18CQ9Y3D5 142 aaKnown RBP13.81□□□□□ -0.2
ZNF541-201ENST00000263351 TRAV3A0A0B4J244 114 aa13.8□□□□□ -0.2
ZNF541-201ENST00000263351 C11orf94C9JXX5 98 aa13.8□□□□□ -0.2
ZNF541-201ENST00000263351 EREGO14944 169 aa13.8□□□□□ -0.2
ZNF541-201ENST00000263351 YKT6O15498 198 aa13.8□□□□□ -0.2
ZNF541-201ENST00000263351 GNB1P62873 340 aa13.8□□□□□ -0.2
ZNF541-201ENST00000263351 ARG2P78540 354 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms