RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 SAXO1Q8IYX7 474 aa10.69□□□□□ -0.7
LIG1-201ENST00000263274 TMEM204Q9BSN7 226 aa10.69□□□□□ -0.7
LIG1-201ENST00000263274 WDR61Q9GZS3 305 aaKnown RBP10.69□□□□□ -0.7
LIG1-201ENST00000263274 SDF2L1Q9HCN8 221 aa10.69□□□□□ -0.7
LIG1-201ENST00000263274 A0A087WWC5 75 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 PAGE4O60829 102 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 ZG16O60844 167 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 MRPL49Q13405 166 aaKnown RBP10.68□□□□□ -0.7
LIG1-201ENST00000263274 KRTAP27-1Q3LI81 207 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 ZNF585BQ52M93 769 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 TMEM41BQ5BJD5 291 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 RPP25LQ8N5L8 163 aaKnown RBP10.68□□□□□ -0.7
LIG1-201ENST00000263274 OR10P1Q8NGE3 313 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 OR13D1Q8NGV5 346 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 NANOS1Q8WY41 292 aaKnown RBP10.68□□□□□ -0.7
LIG1-201ENST00000263274 CISD1Q9NZ45 108 aaKnown RBP10.68□□□□□ -0.7
LIG1-201ENST00000263274 GOLT1BQ9Y3E0 138 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 AGFG2O95081 481 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 PPP1CBP62140 327 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 MSMO1Q15800 293 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 H2BFWTQ7Z2G1 175 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 OR8G5Q8NG78 346 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 SLC25A40Q8TBP6 338 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 IL22RA2Q969J5 263 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 TMEM45BQ96B21 275 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 GALMQ96C23 342 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 PCGF1Q9BSM1 259 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 ELOVL1Q9BW60 279 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 ARRDC1-AS1Q9H2J1 176 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 CBLN4Q9NTU7 201 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 SPTBN4Q9H254 2564 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 LMO1P25800 156 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 GALR1P47211 349 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 LRRC75BQ2VPJ9 315 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 DCAF10Q5QP82 559 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 ZNF295-AS1Q8N0V1 137 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 ZNF664Q8N3J9 261 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 OR10A7Q8NGE5 316 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 NDUFAF3Q9BU61 184 aa10.68□□□□□ -0.7
LIG1-201ENST00000263274 PARD6GQ9BYG4 376 aaPredicted RBP10.68□□□□□ -0.7
LIG1-201ENST00000263274 S1PR2O95136 353 aa10.67□□□□□ -0.7
LIG1-201ENST00000263274 EDDM3BP56851 147 aa10.67□□□□□ -0.7
LIG1-201ENST00000263274 MEF2BQ02080 365 aaPredicted RBP10.67□□□□□ -0.7
LIG1-201ENST00000263274 PNRC1Q12796 327 aaPredicted RBP10.67□□□□□ -0.7
LIG1-201ENST00000263274 HINT2Q9BX68 163 aa10.67□□□□□ -0.7
LIG1-201ENST00000263274 OR51I2Q9H344 312 aa10.67□□□□□ -0.7
LIG1-201ENST00000263274 POLDIP2Q9Y2S7 368 aa10.67□□□□□ -0.7
LIG1-201ENST00000263274 A8MWP6 167 aa10.67□□□□□ -0.7
LIG1-201ENST00000263274 IGKV1D-33P01593 117 aa10.67□□□□□ -0.7
LIG1-201ENST00000263274 IGKV1-33P01594 117 aa10.67□□□□□ -0.7
LIG1-201ENST00000263274 CEACAM1P13688 526 aa10.67□□□□□ -0.7
LIG1-201ENST00000263274 FAM3BP58499 235 aaPredicted RBP10.67□□□□□ -0.7
LIG1-201ENST00000263274 TFF3Q07654 80 aa10.67□□□□□ -0.7
LIG1-201ENST00000263274 WDYHV1Q96HA8 205 aa10.67□□□□□ -0.7
LIG1-201ENST00000263274 MSL2Q9HCI7 577 aa10.67□□□□□ -0.7
LIG1-201ENST00000263274 SH3BGRL2Q9UJC5 107 aa10.67□□□□□ -0.7
LIG1-201ENST00000263274 PSG11Q9UQ72 335 aa10.67□□□□□ -0.7
LIG1-201ENST00000263274 PIEZO1Q92508 2521 aa10.67□□□□□ -0.7
LIG1-201ENST00000263274 XKRY2A2RUG3 117 aa10.66□□□□□ -0.7
LIG1-201ENST00000263274 A6NNC1 897 aa10.66□□□□□ -0.7
LIG1-201ENST00000263274 B4DEV8 164 aa10.66□□□□□ -0.7
LIG1-201ENST00000263274 OPN1MWP04001 364 aa10.66□□□□□ -0.7
LIG1-201ENST00000263274 OPN1MW2P0DN77 364 aa10.66□□□□□ -0.7
LIG1-201ENST00000263274 OPN1MW3P0DN78 364 aa10.66□□□□□ -0.7
LIG1-201ENST00000263274 RPL30P62888 115 aaKnown RBP10.66□□□□□ -0.7
LIG1-201ENST00000263274 PRAMEF6Q5VXH4 476 aa10.66□□□□□ -0.7
LIG1-201ENST00000263274 ACSM6Q6P461 480 aa10.66□□□□□ -0.7
LIG1-201ENST00000263274 Q6ZS49 121 aa10.66□□□□□ -0.7
LIG1-201ENST00000263274 PINX1Q96BK5 328 aaKnown RBP10.66□□□□□ -0.7
LIG1-201ENST00000263274 DCTN5Q9BTE1 182 aa10.66□□□□□ -0.7
LIG1-201ENST00000263274 LINC00470Q9BZP3 86 aa10.66□□□□□ -0.7
LIG1-201ENST00000263274 FUT9Q9Y231 359 aa10.66□□□□□ -0.7
LIG1-201ENST00000263274 M0R296 226 aa10.66□□□□□ -0.7
LIG1-201ENST00000263274 HAND1O96004 215 aa10.66□□□□□ -0.7
LIG1-201ENST00000263274 RPL29P47914 159 aaKnown RBP10.66□□□□□ -0.7
LIG1-201ENST00000263274 SERF2P84101 59 aa10.66□□□□□ -0.7
LIG1-201ENST00000263274 UBALD2Q8IYN6 164 aa10.66□□□□□ -0.7
LIG1-201ENST00000263274 NAT8Q9UHE5 227 aa10.66□□□□□ -0.7
LIG1-201ENST00000263274 ELOA3CA0A087WX78 387 aaPredicted RBP10.66□□□□□ -0.7
LIG1-201ENST00000263274 A0A1W2PPV4 95 aa10.66□□□□□ -0.7
LIG1-201ENST00000263274 MARCH11A6NNE9 402 aa10.66□□□□□ -0.7
LIG1-201ENST00000263274 C17orf98A8MV24 154 aa10.66□□□□□ -0.7
LIG1-201ENST00000263274 PSPNO60542 156 aa10.66□□□□□ -0.7
LIG1-201ENST00000263274 HOXC12P31275 282 aa10.66□□□□□ -0.7
LIG1-201ENST00000263274 CATR1Q13166 79 aa10.66□□□□□ -0.7
LIG1-201ENST00000263274 DPPA3Q6W0C5 159 aa10.66□□□□□ -0.7
LIG1-201ENST00000263274 MRPL41Q8IXM3 137 aaKnown RBP10.66□□□□□ -0.7
LIG1-201ENST00000263274 OR4X1Q8NH49 305 aa10.66□□□□□ -0.7
LIG1-201ENST00000263274 YPEL4Q96NS1 127 aa10.66□□□□□ -0.7
LIG1-201ENST00000263274 HIST1H2BLQ99880 126 aa10.66□□□□□ -0.7
LIG1-201ENST00000263274 GPR87Q9BY21 358 aa10.66□□□□□ -0.7
LIG1-201ENST00000263274 PARLQ9H300 379 aa10.66□□□□□ -0.7
LIG1-201ENST00000263274 PATZ1Q9HBE1 687 aaKnown RBP10.66□□□□□ -0.7
LIG1-201ENST00000263274 POLEQ07864 2286 aa10.65□□□□□ -0.7
LIG1-201ENST00000263274 IGKV3D-15A0A087WSY6 115 aa10.65□□□□□ -0.7
LIG1-201ENST00000263274 ODAMA1E959 279 aa10.65□□□□□ -0.7
LIG1-201ENST00000263274 RNF212BA8MTL3 300 aa10.65□□□□□ -0.7
LIG1-201ENST00000263274 IL18BPO95998 194 aa10.65□□□□□ -0.7
LIG1-201ENST00000263274 COL10A1Q03692 680 aa10.65□□□□□ -0.7
LIG1-201ENST00000263274 FBXW9Q5XUX1 488 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms