RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 BORCS7Q96B45 105 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 NUDT11Q96G61 164 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 NPCDR1Q9BY65 106 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 SEPSECSQ9HD40 501 aaKnown RBP6.11□□□□□ -1.43
CSDE1-201ENST00000261443 OBP2AQ9NY56 170 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 FAM186AA6NE01 2351 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 A0A1W2PRS3 328 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 IGLC7A0M8Q6 106 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 TMEM238C9JI98 176 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 CIDEAO60543 219 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 CRYGSP22914 178 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 ZNF83P51522 516 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 GFRA1P56159 465 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 LGALS4P56470 323 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 CLDN15P56746 228 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 OR1D5P58170 312 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 RPS16P62249 146 aaKnown RBP6.11□□□□□ -1.43
CSDE1-201ENST00000261443 HTD2P86397 168 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 STUMQ69YW2 141 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 ZIC4Q8N9L1 334 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 OR10P1Q8NGE3 313 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 OR1L1Q8NH94 360 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 TMEM54Q969K7 222 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 RCHY1Q96PM5 261 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 RPP25Q9BUL9 199 aaKnown RBP6.11□□□□□ -1.43
CSDE1-201ENST00000261443 ULBP2Q9BZM5 246 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 METTL7AQ9H8H3 244 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 CLN8Q9UBY8 286 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 NAT8BQ9UHF3 227 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 DIDO1Q9BTC0 2240 aaKnown RBP6.11□□□□□ -1.43
CSDE1-201ENST00000261443 PCDH15Q96QU1 1955 aa6.11□□□□□ -1.43
CSDE1-201ENST00000261443 EXPH5Q8NEV8 1989 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 A0A1W2PPV4 95 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 FAM90A10PA6NDY2 464 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 FAM90A18PA6NE21 464 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 FAM90A16PA6NEW6 464 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 FAM90A20PA6NIJ5 464 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 FAM90A8PA6NJQ4 464 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 FAM90A7PA6NKC0 464 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 OR5B21A6NL26 309 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 FAM90A22PA8MWA6 464 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 FAM90A12PA8MX19 464 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 FAM90A5PA8MXJ8 464 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 FAM90A23PA8MXZ1 464 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 C17orf112F2Z3M2 114 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 ZNF324O75467 553 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-201ENST00000261443 S1PR2O95136 353 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 FAM90A15PP0C7V4 464 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 FAM90A13PP0C7W8 464 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 FAM90A14PP0C7W9 464 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 FAM90A24PP0C7X0 464 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 GABRA2P47869 451 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 RPEL1Q2QD12 228 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 KIAA1644Q3SXP7 199 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 OR10J3Q5JRS4 329 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 ZNF324BQ6AW86 544 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-201ENST00000261443 FOXL2NBQ6ZUU3 175 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 PNKDQ8N490 385 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 ZNF596Q8TC21 504 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 IFI44Q8TCB0 444 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 IL1F10Q8WWZ1 152 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 ZNF837Q96EG3 531 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-201ENST00000261443 UHRF2Q96PU4 802 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 TMEM204Q9BSN7 226 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 CHODLQ9H9P2 273 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 TRBV9A0A0B4J1U6 114 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 IGHV3-15A0A0B4J1V0 119 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 TRAV38-1A0A0B4J264 116 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 SCO2A0A1W2PP80 73 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 NPIPA2E9PIF3 369 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 NPIPA3F8WFD2 350 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 PSG1P11464 419 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 NTF3P20783 257 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 FAM19A2Q8N3H0 131 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 OR1F12Q8NHA8 337 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 MRGPRX1Q96LB2 322 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 GNB1LQ9BYB4 327 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 RPH3ALQ9UNE2 315 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 HS3ST3A1Q9Y663 406 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 NBEAQ8NFP9 2946 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 SAA2-SAA4A0A096LPE2 208 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 LOC102724200A0A096LPH7 203 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-201ENST00000261443 LRP5LA4QPB2 252 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 FAM90A26D6RGX4 464 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 SIRPB1O00241 398 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 TNFSF11O14788 317 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 SYNGR3O43761 229 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 SPINK4O60575 86 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 GLB1P16278 677 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 PMCHL1Q16048 86 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 ZNF585BQ52M93 769 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 KIAA0895LQ68EN5 471 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 LCN12Q6JVE5 192 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 C19orf35Q6ZS72 473 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 MMD2Q8IY49 270 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 OR8I2Q8N0Y5 310 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 HS3ST6Q96QI5 342 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 SFXN3Q9BWM7 321 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 IL36RNQ9UBH0 155 aa6.1□□□□□ -1.43
CSDE1-201ENST00000261443 KCNS2Q9ULS6 477 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms