RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 CACNA1DQ01668 2161 aa11.4□□□□□ -0.58
PCDHGA3-201ENST00000253812 IL2RAP01589 272 aa11.4□□□□□ -0.58
PCDHGA3-201ENST00000253812 DRD3P35462 400 aa11.4□□□□□ -0.58
PCDHGA3-201ENST00000253812 C1QL3Q5VWW1 255 aa11.4□□□□□ -0.58
PCDHGA3-201ENST00000253812 SOSTQ9BQB4 213 aa11.4□□□□□ -0.58
PCDHGA3-201ENST00000253812 IL36RNQ9UBH0 155 aa11.4□□□□□ -0.58
PCDHGA3-201ENST00000253812 SHISA8B8ZZ34 492 aa11.4□□□□□ -0.58
PCDHGA3-201ENST00000253812 CRYBB3P26998 211 aa11.4□□□□□ -0.58
PCDHGA3-201ENST00000253812 TUSC5Q8IXB3 177 aa11.4□□□□□ -0.58
PCDHGA3-201ENST00000253812 OR4X2Q8NGF9 303 aa11.4□□□□□ -0.58
PCDHGA3-201ENST00000253812 TMEM208Q9BTX3 173 aa11.4□□□□□ -0.58
PCDHGA3-201ENST00000253812 RNF122Q9H9V4 155 aa11.4□□□□□ -0.58
PCDHGA3-201ENST00000253812 RAXQ9Y2V3 346 aa11.4□□□□□ -0.58
PCDHGA3-201ENST00000253812 MRPS16Q9Y3D3 137 aaKnown RBP11.4□□□□□ -0.58
PCDHGA3-201ENST00000253812 OR51B2Q9Y5P1 312 aa11.4□□□□□ -0.58
PCDHGA3-201ENST00000253812 TRAV38-1A0A0B4J264 116 aa11.4□□□□□ -0.59
PCDHGA3-201ENST00000253812 RAMP1O60894 148 aa11.4□□□□□ -0.59
PCDHGA3-201ENST00000253812 SERF1AO75920 110 aa11.4□□□□□ -0.59
PCDHGA3-201ENST00000253812 NTN1O95631 604 aa11.4□□□□□ -0.59
PCDHGA3-201ENST00000253812 TIMM23BQ5SRD1 257 aa11.4□□□□□ -0.59
PCDHGA3-201ENST00000253812 RCC1LQ96I51 464 aaKnown RBP11.4□□□□□ -0.59
PCDHGA3-201ENST00000253812 NEU1Q99519 415 aa11.4□□□□□ -0.59
PCDHGA3-201ENST00000253812 PCM1Q15154 2024 aa11.4□□□□□ -0.59
PCDHGA3-201ENST00000253812 RNF222A6NCQ9 220 aa11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 PGPA6NDG6 321 aa11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 M0R1B8 84 aa11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 NUBP1P53384 320 aa11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 RPS20P60866 119 aaKnown RBP11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 HIST1H1AQ02539 215 aaPredicted RBP11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 FOXC1Q12948 553 aa11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 C1orf194Q5T5A4 169 aa11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 HEPN1Q6WQI6 88 aa11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 LRRC29Q8WV35 223 aa11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 MARS2Q96GW9 593 aaKnown RBP11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 PLSCR2Q9NRY7 297 aa11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 AMMECR1Q9Y4X0 333 aaPredicted RBP11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 COLCA2A8K830 154 aa11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 J3QT63 122 aa11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 COL9A1P20849 921 aa11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 UBE2V1Q13404 147 aa11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 TMEM92Q6UXU6 159 aa11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 RBPMS2Q6ZRY4 209 aaKnown RBP11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 SLC25A40Q8TBP6 338 aa11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 FAM186AA6NE01 2351 aa11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 COL11A1P12107 1806 aaPredicted RBP11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 MSGN1A6NI15 193 aa11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 FOXA3P55318 350 aaPredicted RBP11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 ZFAND6Q6FIF0 208 aa11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 UNQ9370/PRO34162Q6UXP9 181 aa11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 C1QL4Q86Z23 238 aa11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 SCNM1Q9BWG6 230 aa11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 LINC00470Q9BZP3 86 aa11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 HIGD1AQ9Y241 93 aa11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 TNS1Q9HBL0 1735 aaKnown RBP11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 ATAD5Q96QE3 1844 aa11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 ERGP11308 486 aa11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 C1orf185Q5T7R7 199 aa11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 SPANXA1Q9NS26 97 aa11.39□□□□□ -0.59
PCDHGA3-201ENST00000253812 ATXN7O15265 892 aaPredicted RBP11.38□□□□□ -0.59
PCDHGA3-201ENST00000253812 SPRY3O43610 288 aa11.38□□□□□ -0.59
PCDHGA3-201ENST00000253812 ARL14EPLP0DKL9 152 aa11.38□□□□□ -0.59
PCDHGA3-201ENST00000253812 C8orf88P0DMB2 117 aa11.38□□□□□ -0.59
PCDHGA3-201ENST00000253812 MIC13Q5XKP0 118 aa11.38□□□□□ -0.59
PCDHGA3-201ENST00000253812 OR52M1Q8NGK5 317 aa11.38□□□□□ -0.59
PCDHGA3-201ENST00000253812 SSBP4Q9BWG4 385 aaPredicted RBP11.38□□□□□ -0.59
PCDHGA3-201ENST00000253812 DEFB127Q9H1M4 99 aa11.38□□□□□ -0.59
PCDHGA3-201ENST00000253812 TMEM50AO95807 157 aa11.38□□□□□ -0.59
PCDHGA3-201ENST00000253812 OR4A8P0C604 315 aa11.38□□□□□ -0.59
PCDHGA3-201ENST00000253812 TM4SF20Q53R12 229 aa11.38□□□□□ -0.59
PCDHGA3-201ENST00000253812 TPTE2P1Q5T6R2 138 aa11.38□□□□□ -0.59
PCDHGA3-201ENST00000253812 NFAM1Q8NET5 270 aaPredicted RBP11.38□□□□□ -0.59
PCDHGA3-201ENST00000253812 IMMP2LQ96T52 175 aa11.38□□□□□ -0.59
PCDHGA3-201ENST00000253812 LRRC61Q9BV99 259 aa11.38□□□□□ -0.59
PCDHGA3-201ENST00000253812 TRPM6Q9BX84 2022 aa11.38□□□□□ -0.59
PCDHGA3-201ENST00000253812 RND1Q92730 232 aa11.38□□□□□ -0.59
PCDHGA3-201ENST00000253812 LMO7DNF2Z398 122 aa11.37□□□□□ -0.59
PCDHGA3-201ENST00000253812 IGHV3-13P01766 116 aa11.37□□□□□ -0.59
PCDHGA3-201ENST00000253812 IGHV3-7P01780 117 aa11.37□□□□□ -0.59
PCDHGA3-201ENST00000253812 HOXB3P14651 431 aaPredicted RBP11.37□□□□□ -0.59
PCDHGA3-201ENST00000253812 C19orf24Q9BVV8 132 aa11.37□□□□□ -0.59
PCDHGA3-201ENST00000253812 TRBV5-7A0A0A0MS05 114 aa11.37□□□□□ -0.59
PCDHGA3-201ENST00000253812 APOMO95445 188 aa11.37□□□□□ -0.59
PCDHGA3-201ENST00000253812 PYY3Q5JQD4 70 aa11.37□□□□□ -0.59
PCDHGA3-201ENST00000253812 ORAOV1Q8WV07 137 aa11.37□□□□□ -0.59
PCDHGA3-201ENST00000253812 KISS1RQ969F8 398 aaPredicted RBP11.37□□□□□ -0.59
PCDHGA3-201ENST00000253812 GPR146Q96CH1 333 aa11.37□□□□□ -0.59
PCDHGA3-201ENST00000253812 HARBI1Q96MB7 349 aa11.37□□□□□ -0.59
PCDHGA3-201ENST00000253812 AICDAQ9GZX7 198 aa11.37□□□□□ -0.59
PCDHGA3-201ENST00000253812 HILPDAQ9Y5L2 63 aa11.37□□□□□ -0.59
PCDHGA3-201ENST00000253812 ZFC3H1O60293 1989 aaKnown RBP11.37□□□□□ -0.59
PCDHGA3-201ENST00000253812 AHCTF1Q8WYP5 2266 aa11.37□□□□□ -0.59
PCDHGA3-201ENST00000253812 TMEM108Q6UXF1 575 aa11.37□□□□□ -0.59
PCDHGA3-201ENST00000253812 SRSF12Q8WXF0 261 aaKnown RBP11.37□□□□□ -0.59
PCDHGA3-201ENST00000253812 PLXNB2O15031 1838 aa11.37□□□□□ -0.59
PCDHGA3-201ENST00000253812 TRAV30A0A087WSZ9 112 aa11.37□□□□□ -0.59
PCDHGA3-201ENST00000253812 PIN1P1O15428 100 aa11.37□□□□□ -0.59
PCDHGA3-201ENST00000253812 CENPWQ5EE01 88 aa11.37□□□□□ -0.59
PCDHGA3-201ENST00000253812 FAM19A2Q8N3H0 131 aa11.37□□□□□ -0.59
PCDHGA3-201ENST00000253812 CXXC4Q9H2H0 198 aa11.37□□□□□ -0.59
PCDHGA3-201ENST00000253812 TMEM160Q9NX00 188 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms