RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 RTL8BQ17RB0 113 aa10.04□□□□□ -0.8
VPREB3-201ENST00000248948 LIN54Q6MZP7 749 aa10.04□□□□□ -0.8
VPREB3-201ENST00000248948 DRAXINQ8NBI3 349 aaPredicted RBP10.04□□□□□ -0.8
VPREB3-201ENST00000248948 AP3S1Q92572 193 aa10.04□□□□□ -0.8
VPREB3-201ENST00000248948 RBMXL1Q96E39 390 aaKnown RBP10.04□□□□□ -0.8
VPREB3-201ENST00000248948 C5orf30Q96GV9 206 aa10.04□□□□□ -0.8
VPREB3-201ENST00000248948 RITA1Q96K30 269 aa10.04□□□□□ -0.8
VPREB3-201ENST00000248948 OR51J1Q9H342 316 aa10.04□□□□□ -0.8
VPREB3-201ENST00000248948 LINC00527Q9UJ94 153 aa10.04□□□□□ -0.8
VPREB3-201ENST00000248948 TUSC2O75896 110 aa10.03□□□□□ -0.8
VPREB3-201ENST00000248948 HLA-DQB1P01920 261 aa10.03□□□□□ -0.8
VPREB3-201ENST00000248948 APOA1P02647 267 aa10.03□□□□□ -0.8
VPREB3-201ENST00000248948 PF4P02776 101 aa10.03□□□□□ -0.8
VPREB3-201ENST00000248948 RORCP51449 518 aa10.03□□□□□ -0.8
VPREB3-201ENST00000248948 LUMP51884 338 aaPredicted RBP10.03□□□□□ -0.8
VPREB3-201ENST00000248948 TAS2R20P59543 309 aa10.03□□□□□ -0.8
VPREB3-201ENST00000248948 PLGLAQ15195 96 aa10.03□□□□□ -0.8
VPREB3-201ENST00000248948 MSMO1Q15800 293 aa10.03□□□□□ -0.8
VPREB3-201ENST00000248948 CXorf66Q5JRM2 361 aaPredicted RBP10.03□□□□□ -0.8
VPREB3-201ENST00000248948 OVCH2Q7RTZ1 564 aa10.03□□□□□ -0.8
VPREB3-201ENST00000248948 GPR141Q7Z602 305 aa10.03□□□□□ -0.8
VPREB3-201ENST00000248948 TCTEX1D1Q8N7M0 179 aa10.03□□□□□ -0.8
VPREB3-201ENST00000248948 DDB2Q92466 427 aa10.03□□□□□ -0.8
VPREB3-201ENST00000248948 FLYWCH2Q96CP2 140 aaKnown RBP10.03□□□□□ -0.8
VPREB3-201ENST00000248948 PARP11Q9NR21 331 aa10.03□□□□□ -0.8
VPREB3-201ENST00000248948 NECAP2Q9NVZ3 263 aa10.03□□□□□ -0.8
VPREB3-201ENST00000248948 ANAPC10Q9UM13 185 aa10.03□□□□□ -0.8
VPREB3-201ENST00000248948 NFYAP23511 347 aaPredicted RBP10.02□□□□□ -0.81
VPREB3-201ENST00000248948 PSMB8P28062 276 aa10.02□□□□□ -0.81
VPREB3-201ENST00000248948 DUTP33316 252 aaKnown RBP10.02□□□□□ -0.81
VPREB3-201ENST00000248948 LGALS7P47929 136 aa10.02□□□□□ -0.81
VPREB3-201ENST00000248948 NDPQ00604 133 aa10.02□□□□□ -0.81
VPREB3-201ENST00000248948 PSG5Q15238 335 aa10.02□□□□□ -0.81
VPREB3-201ENST00000248948 TMEM177Q53S58 311 aa10.02□□□□□ -0.81
VPREB3-201ENST00000248948 SAMD5Q5TGI4 173 aa10.02□□□□□ -0.81
VPREB3-201ENST00000248948 GPR107Q5VW38 600 aa10.02□□□□□ -0.81
VPREB3-201ENST00000248948 ZNF660Q6AZW8 331 aaPredicted RBP10.02□□□□□ -0.81
VPREB3-201ENST00000248948 KCTD9Q7L273 389 aa10.02□□□□□ -0.81
VPREB3-201ENST00000248948 SNAPC3Q92966 411 aa10.02□□□□□ -0.81
VPREB3-201ENST00000248948 HARBI1Q96MB7 349 aa10.02□□□□□ -0.81
VPREB3-201ENST00000248948 BCL7BQ9BQE9 202 aa10.02□□□□□ -0.81
VPREB3-201ENST00000248948 NAA50Q9GZZ1 169 aaKnown RBP10.02□□□□□ -0.81
VPREB3-201ENST00000248948 FBXL15Q9H469 300 aa10.02□□□□□ -0.81
VPREB3-201ENST00000248948 IFT46Q9NQC8 304 aa10.02□□□□□ -0.81
VPREB3-201ENST00000248948 METTL1Q9UBP6 276 aaKnown RBP10.02□□□□□ -0.81
VPREB3-201ENST00000248948 TRAV41A0A0B4J266 112 aa10.01□□□□□ -0.81
VPREB3-201ENST00000248948 EIF4EP06730 217 aaKnown RBP10.01□□□□□ -0.81
VPREB3-201ENST00000248948 PPIFP30405 207 aaKnown RBP10.01□□□□□ -0.81
VPREB3-201ENST00000248948 C19orf54Q5BKX5 351 aa10.01□□□□□ -0.81
VPREB3-201ENST00000248948 KPRPQ5T749 579 aaPredicted RBP10.01□□□□□ -0.81
VPREB3-201ENST00000248948 GVQW1Q8N7I0 195 aa10.01□□□□□ -0.81
VPREB3-201ENST00000248948 KLHL30-AS1Q8NEE0 82 aa10.01□□□□□ -0.81
VPREB3-201ENST00000248948 OR5AP2Q8NGF4 316 aa10.01□□□□□ -0.81
VPREB3-201ENST00000248948 OSR1Q8TAX0 266 aaPredicted RBP10.01□□□□□ -0.81
VPREB3-201ENST00000248948 MYOZ3Q8TDC0 251 aa10.01□□□□□ -0.81
VPREB3-201ENST00000248948 MRPS7Q9Y2R9 242 aaKnown RBP10.01□□□□□ -0.81
VPREB3-201ENST00000248948 RBMX2Q9Y388 322 aaKnown RBP10.01□□□□□ -0.81
VPREB3-201ENST00000248948 IGKV1D-13A0A0B4J2D9 117 aa10□□□□□ -0.81
VPREB3-201ENST00000248948 LINC00473A8K010 186 aa10□□□□□ -0.81
VPREB3-201ENST00000248948 NUDT19A8MXV4 375 aa10□□□□□ -0.81
VPREB3-201ENST00000248948 SLC25A17O43808 307 aa10□□□□□ -0.81
VPREB3-201ENST00000248948 CA2P00918 260 aa10□□□□□ -0.81
VPREB3-201ENST00000248948 PPYP01298 95 aa10□□□□□ -0.81
VPREB3-201ENST00000248948 IGLV1-40P01703 118 aa10□□□□□ -0.81
VPREB3-201ENST00000248948 IGLV2-14P01704 120 aa10□□□□□ -0.81
VPREB3-201ENST00000248948 IGLV2-23P01705 113 aa10□□□□□ -0.81
VPREB3-201ENST00000248948 IGKV1-13P0DP09 117 aa10□□□□□ -0.81
VPREB3-201ENST00000248948 LINC00205P59089 165 aa10□□□□□ -0.81
VPREB3-201ENST00000248948 RPS16P62249 146 aaKnown RBP10□□□□□ -0.81
VPREB3-201ENST00000248948 CX3CL1P78423 397 aa10□□□□□ -0.81
VPREB3-201ENST00000248948 CDK10Q15131 360 aa10□□□□□ -0.81
VPREB3-201ENST00000248948 PYHIN1Q6K0P9 492 aa10□□□□□ -0.81
VPREB3-201ENST00000248948 MZT2AQ6P582 158 aa10□□□□□ -0.81
VPREB3-201ENST00000248948 ZNF562Q6V9R5 426 aa10□□□□□ -0.81
VPREB3-201ENST00000248948 ETV3LQ6ZN32 361 aa10□□□□□ -0.81
VPREB3-201ENST00000248948 PPP1R27Q86WC6 154 aa10□□□□□ -0.81
VPREB3-201ENST00000248948 ZNF695Q8IW36 515 aa10□□□□□ -0.81
VPREB3-201ENST00000248948 MINDY2Q8NBR6 621 aa10□□□□□ -0.81
VPREB3-201ENST00000248948 BVESQ8NE79 360 aa10□□□□□ -0.81
VPREB3-201ENST00000248948 WFDC9Q8NEX5 89 aa10□□□□□ -0.81
VPREB3-201ENST00000248948 RAB2BQ8WUD1 216 aa10□□□□□ -0.81
VPREB3-201ENST00000248948 ARPC1AQ92747 370 aa10□□□□□ -0.81
VPREB3-201ENST00000248948 HSD17B10Q99714 261 aaKnown RBP10□□□□□ -0.81
VPREB3-201ENST00000248948 SCPEP1Q9HB40 452 aa10□□□□□ -0.81
VPREB3-201ENST00000248948 COMMD3Q9UBI1 195 aa10□□□□□ -0.81
VPREB3-201ENST00000248948 ADAM30Q9UKF2 790 aa10□□□□□ -0.81
VPREB3-201ENST00000248948 PRELID3BQ9Y3B1 194 aa10□□□□□ -0.81
VPREB3-201ENST00000248948 SMIM31A0A1B0GVY4 71 aa9.99□□□□□ -0.81
VPREB3-201ENST00000248948 SHOXO15266 292 aa9.99□□□□□ -0.81
VPREB3-201ENST00000248948 CREBL2O60519 120 aaPredicted RBP9.99□□□□□ -0.81
VPREB3-201ENST00000248948 DUS4LO95620 317 aaKnown RBP9.99□□□□□ -0.81
VPREB3-201ENST00000248948 RPLP1P05386 114 aaKnown RBP9.99□□□□□ -0.81
VPREB3-201ENST00000248948 PTHLHP12272 177 aa9.99□□□□□ -0.81
VPREB3-201ENST00000248948 ZNF182P17025 639 aaPredicted RBP9.99□□□□□ -0.81
VPREB3-201ENST00000248948 NAT1P18440 290 aa9.99□□□□□ -0.81
VPREB3-201ENST00000248948 CD33P20138 364 aa9.99□□□□□ -0.81
VPREB3-201ENST00000248948 FCGR2CP31995 323 aa9.99□□□□□ -0.81
VPREB3-201ENST00000248948 PRSS3P35030 304 aa9.99□□□□□ -0.81
VPREB3-201ENST00000248948 CDX1P47902 265 aaPredicted RBP9.99□□□□□ -0.81
VPREB3-201ENST00000248948 TAS2R46P59540 309 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms