RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 RAMP3O60896 148 aa11.62□□□□□ -0.55
SDF2-201ENST00000247020 IFNA7P01567 189 aa11.62□□□□□ -0.55
SDF2-201ENST00000247020 COX6B1P14854 86 aa11.62□□□□□ -0.55
SDF2-201ENST00000247020 P2RY1P47900 373 aa11.62□□□□□ -0.55
SDF2-201ENST00000247020 GNG10P50151 68 aa11.62□□□□□ -0.55
SDF2-201ENST00000247020 ZNF137PP52743 207 aa11.62□□□□□ -0.55
SDF2-201ENST00000247020 RPL39P5Q59GN2 51 aa11.62□□□□□ -0.55
SDF2-201ENST00000247020 GPR157Q5UAW9 335 aa11.62□□□□□ -0.55
SDF2-201ENST00000247020 NCR3LG1Q68D85 454 aa11.62□□□□□ -0.55
SDF2-201ENST00000247020 OR8H1Q8NGG4 311 aa11.62□□□□□ -0.55
SDF2-201ENST00000247020 OR4S2Q8NH73 311 aa11.62□□□□□ -0.55
SDF2-201ENST00000247020 LEAP2Q969E1 77 aa11.62□□□□□ -0.55
SDF2-201ENST00000247020 TMEM186Q96B77 213 aa11.62□□□□□ -0.55
SDF2-201ENST00000247020 ARPC5LQ9BPX5 153 aa11.62□□□□□ -0.55
SDF2-201ENST00000247020 TMEM133Q9H2Q1 129 aa11.62□□□□□ -0.55
SDF2-201ENST00000247020 BARX1Q9HBU1 254 aaPredicted RBP11.62□□□□□ -0.55
SDF2-201ENST00000247020 A0A0G2JRQ6 117 aa11.62□□□□□ -0.55
SDF2-201ENST00000247020 J3QR06 171 aa11.62□□□□□ -0.55
SDF2-201ENST00000247020 M0R1W7 72 aa11.62□□□□□ -0.55
SDF2-201ENST00000247020 TAAR5O14804 337 aa11.62□□□□□ -0.55
SDF2-201ENST00000247020 S1PR2O95136 353 aa11.62□□□□□ -0.55
SDF2-201ENST00000247020 IL3RAP26951 378 aa11.62□□□□□ -0.55
SDF2-201ENST00000247020 PDLIM4P50479 330 aa11.62□□□□□ -0.55
SDF2-201ENST00000247020 UBA52P62987 128 aaKnown RBP11.62□□□□□ -0.55
SDF2-201ENST00000247020 ZNF816Q0VGE8 651 aaPredicted RBP11.62□□□□□ -0.55
SDF2-201ENST00000247020 UTF1Q5T230 341 aa11.62□□□□□ -0.55
SDF2-201ENST00000247020 DHRS7BQ6IAN0 325 aaPredicted RBP11.62□□□□□ -0.55
SDF2-201ENST00000247020 C11orf1Q9H5F2 150 aa11.62□□□□□ -0.55
SDF2-201ENST00000247020 CACFD1Q9UGQ2 172 aa11.62□□□□□ -0.55
SDF2-201ENST00000247020 RCL1Q9Y2P8 373 aaKnown RBP11.62□□□□□ -0.55
SDF2-201ENST00000247020 ZNF462Q96JM2 2506 aa11.61□□□□□ -0.55
SDF2-201ENST00000247020 A8MXK9 166 aa11.61□□□□□ -0.55
SDF2-201ENST00000247020 NDUFS8O00217 210 aa11.61□□□□□ -0.55
SDF2-201ENST00000247020 FCGR3BO75015 233 aa11.61□□□□□ -0.55
SDF2-201ENST00000247020 NDUFS7O75251 213 aa11.61□□□□□ -0.55
SDF2-201ENST00000247020 IGHV3-7P01780 117 aa11.61□□□□□ -0.55
SDF2-201ENST00000247020 RRASP10301 218 aa11.61□□□□□ -0.55
SDF2-201ENST00000247020 RPL12P30050 165 aaKnown RBP11.61□□□□□ -0.55
SDF2-201ENST00000247020 AP2S1P53680 142 aaPredicted RBP11.61□□□□□ -0.55
SDF2-201ENST00000247020 ERVFRD-1P60508 538 aa11.61□□□□□ -0.55
SDF2-201ENST00000247020 NDUFA5Q16718 116 aa11.61□□□□□ -0.55
SDF2-201ENST00000247020 FOXRED2Q8IWF2 684 aa11.61□□□□□ -0.55
SDF2-201ENST00000247020 KIR3DL3Q8N743 410 aa11.61□□□□□ -0.55
SDF2-201ENST00000247020 ZNF680Q8NEM1 530 aa11.61□□□□□ -0.55
SDF2-201ENST00000247020 DMBX1Q8NFW5 382 aa11.61□□□□□ -0.55
SDF2-201ENST00000247020 CACNG5Q9UF02 275 aa11.61□□□□□ -0.55
SDF2-201ENST00000247020 KMT2BQ9UMN6 2715 aaPredicted RBP11.61□□□□□ -0.55
SDF2-201ENST00000247020 ZFYVE26Q68DK2 2539 aa11.61□□□□□ -0.55
SDF2-201ENST00000247020 LRBAP50851 2863 aa11.6□□□□□ -0.55
SDF2-201ENST00000247020 A0A1W2PPE3 182 aa11.6□□□□□ -0.55
SDF2-201ENST00000247020 MARCH11A6NNE9 402 aa11.6□□□□□ -0.55
SDF2-201ENST00000247020 WRBO00258 174 aa11.6□□□□□ -0.55
SDF2-201ENST00000247020 TOR1AO14656 332 aa11.6□□□□□ -0.55
SDF2-201ENST00000247020 IGHV2-5P01817 119 aa11.6□□□□□ -0.55
SDF2-201ENST00000247020 IGHV4-39P01824 125 aa11.6□□□□□ -0.55
SDF2-201ENST00000247020 HKR1P10072 659 aa11.6□□□□□ -0.55
SDF2-201ENST00000247020 PAX1P15863 534 aa11.6□□□□□ -0.55
SDF2-201ENST00000247020 NQO2P16083 231 aa11.6□□□□□ -0.55
SDF2-201ENST00000247020 EPHA1P21709 976 aa11.6□□□□□ -0.55
SDF2-201ENST00000247020 PRRX1P54821 245 aa11.6□□□□□ -0.55
SDF2-201ENST00000247020 SP5Q6BEB4 398 aaPredicted RBP11.6□□□□□ -0.55
SDF2-201ENST00000247020 C1orf229Q6ZS94 237 aaPredicted RBP11.6□□□□□ -0.55
SDF2-201ENST00000247020 C1orf122Q6ZSJ8 110 aa11.6□□□□□ -0.55
SDF2-201ENST00000247020 H2BFWTQ7Z2G1 175 aa11.6□□□□□ -0.55
SDF2-201ENST00000247020 BEND2Q8NDZ0 799 aa11.6□□□□□ -0.55
SDF2-201ENST00000247020 OR10X1Q8NGY0 326 aa11.6□□□□□ -0.55
SDF2-201ENST00000247020 R3HDM4Q96D70 268 aa11.6□□□□□ -0.55
SDF2-201ENST00000247020 RAB40CQ96S21 281 aa11.6□□□□□ -0.55
SDF2-201ENST00000247020 AIFM2Q9BRQ8 373 aa11.6□□□□□ -0.55
SDF2-201ENST00000247020 ITGB1BP2Q9UKP3 347 aa11.6□□□□□ -0.55
SDF2-201ENST00000247020 LOC105371242A0A075B767 164 aa11.59□□□□□ -0.55
SDF2-201ENST00000247020 KIAA1324LA8MWY0 1029 aaPredicted RBP11.59□□□□□ -0.55
SDF2-201ENST00000247020 GPR137BO60478 399 aa11.59□□□□□ -0.55
SDF2-201ENST00000247020 G6PCP35575 357 aa11.59□□□□□ -0.55
SDF2-201ENST00000247020 ERVK-16P61578 105 aa11.59□□□□□ -0.55
SDF2-201ENST00000247020 POU2AF1Q16633 256 aa11.59□□□□□ -0.55
SDF2-201ENST00000247020 RTL8BQ17RB0 113 aa11.59□□□□□ -0.55
SDF2-201ENST00000247020 MIDNQ504T8 468 aa11.59□□□□□ -0.55
SDF2-201ENST00000247020 OR2B11Q5JQS5 317 aa11.59□□□□□ -0.55
SDF2-201ENST00000247020 Q6ZRM9 215 aa11.59□□□□□ -0.55
SDF2-201ENST00000247020 ABHD12Q8N2K0 398 aa11.59□□□□□ -0.55
SDF2-201ENST00000247020 STOML3Q8TAV4 291 aa11.59□□□□□ -0.55
SDF2-201ENST00000247020 ST6GALNAC6Q969X2 333 aa11.59□□□□□ -0.55
SDF2-201ENST00000247020 PHYHIPLQ96FC7 376 aa11.59□□□□□ -0.55
SDF2-201ENST00000247020 PCGF1Q9BSM1 259 aa11.59□□□□□ -0.55
SDF2-201ENST00000247020 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.59□□□□□ -0.55
SDF2-201ENST00000247020 UBQLN2Q9UHD9 624 aa11.59□□□□□ -0.55
SDF2-201ENST00000247020 USP9XQ93008 2570 aaPredicted RBP11.59□□□□□ -0.55
SDF2-201ENST00000247020 IGHV2-26A0A0B4J1V2 119 aa11.58□□□□□ -0.55
SDF2-201ENST00000247020 MSGN1A6NI15 193 aa11.58□□□□□ -0.55
SDF2-201ENST00000247020 C22orf46C9J442 243 aa11.58□□□□□ -0.55
SDF2-201ENST00000247020 MED6O75586 246 aa11.58□□□□□ -0.55
SDF2-201ENST00000247020 LY86O95711 162 aa11.58□□□□□ -0.55
SDF2-201ENST00000247020 KRASP01116 189 aa11.58□□□□□ -0.55
SDF2-201ENST00000247020 TAS2R30P59541 319 aa11.58□□□□□ -0.55
SDF2-201ENST00000247020 POLR2GP62487 172 aaKnown RBP eCLIP11.58□□□□□ -0.55
SDF2-201ENST00000247020 VAMP2P63027 116 aa11.58□□□□□ -0.55
SDF2-201ENST00000247020 EIF5AP63241 154 aaKnown RBP11.58□□□□□ -0.55
SDF2-201ENST00000247020 EXOSC2Q13868 293 aaKnown RBP11.58□□□□□ -0.55
SDF2-201ENST00000247020 AARDQ4LEZ3 155 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms