RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 CD3EP07766 207 aa15.26■□□□□ 0.03
HOXC11-201ENST00000243082 APOBEC3AP31941 199 aaPredicted RBP15.26■□□□□ 0.03
HOXC11-201ENST00000243082 ADORA2A-AS1P86434 159 aa15.26■□□□□ 0.03
HOXC11-201ENST00000243082 TMEM182Q6ZP80 229 aaPredicted RBP15.26■□□□□ 0.03
HOXC11-201ENST00000243082 RBKSQ9H477 322 aa15.26■□□□□ 0.03
HOXC11-201ENST00000243082 TMEM231Q9H6L2 316 aa15.26■□□□□ 0.03
HOXC11-201ENST00000243082 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.26■□□□□ 0.03
HOXC11-201ENST00000243082 GAB2Q9UQC2 676 aa15.26■□□□□ 0.03
HOXC11-201ENST00000243082 ATRXP46100 2492 aa15.26■□□□□ 0.03
HOXC11-201ENST00000243082 ZNF729A6NN14 1252 aaPredicted RBP15.26■□□□□ 0.03
HOXC11-201ENST00000243082 M0R1X1 148 aa15.26■□□□□ 0.03
HOXC11-201ENST00000243082 PLAUP00749 431 aa15.26■□□□□ 0.03
HOXC11-201ENST00000243082 ARL16Q0P5N6 197 aa15.26■□□□□ 0.03
HOXC11-201ENST00000243082 CDSNQ15517 529 aa15.26■□□□□ 0.03
HOXC11-201ENST00000243082 C1orf87Q8N0U7 546 aa15.26■□□□□ 0.03
HOXC11-201ENST00000243082 OR2G3Q8NGZ4 309 aa15.26■□□□□ 0.03
HOXC11-201ENST00000243082 CCL17Q92583 94 aa15.26■□□□□ 0.03
HOXC11-201ENST00000243082 ABHD14AQ9BUJ0 271 aa15.26■□□□□ 0.03
HOXC11-201ENST00000243082 TMEM106BQ9NUM4 274 aa15.26■□□□□ 0.03
HOXC11-201ENST00000243082 NDRG3Q9UGV2 375 aa15.26■□□□□ 0.03
HOXC11-201ENST00000243082 PPIAL4EA0A075B759 164 aa15.25■□□□□ 0.03
HOXC11-201ENST00000243082 NKX6-3A6NJ46 265 aa15.25■□□□□ 0.03
HOXC11-201ENST00000243082 PPIAL4DF5H284 164 aa15.25■□□□□ 0.03
HOXC11-201ENST00000243082 TNFRSF13BO14836 293 aaPredicted RBP15.25■□□□□ 0.03
HOXC11-201ENST00000243082 FCN3O75636 299 aa15.25■□□□□ 0.03
HOXC11-201ENST00000243082 METTL15P1P0C7V9 234 aa15.25■□□□□ 0.03
HOXC11-201ENST00000243082 PPIAL4FP0DN26 164 aa15.25■□□□□ 0.03
HOXC11-201ENST00000243082 ADCYAP1P18509 176 aa15.25■□□□□ 0.03
HOXC11-201ENST00000243082 M6PRP20645 277 aa15.25■□□□□ 0.03
HOXC11-201ENST00000243082 RAB7AP51149 207 aa15.25■□□□□ 0.03
HOXC11-201ENST00000243082 ARHGDIBP52566 201 aa15.25■□□□□ 0.03
HOXC11-201ENST00000243082 EFNB3Q15768 340 aa15.25■□□□□ 0.03
HOXC11-201ENST00000243082 H2BFWTQ7Z2G1 175 aa15.25■□□□□ 0.03
HOXC11-201ENST00000243082 HAPLN4Q86UW8 402 aa15.25■□□□□ 0.03
HOXC11-201ENST00000243082 IDI2-AS1Q9NZ38 188 aa15.25■□□□□ 0.03
HOXC11-201ENST00000243082 COQ3Q9NZJ6 369 aa15.25■□□□□ 0.03
HOXC11-201ENST00000243082 FAM96BQ9Y3D0 163 aa15.25■□□□□ 0.03
HOXC11-201ENST00000243082 STRAPQ9Y3F4 350 aaKnown RBP15.25■□□□□ 0.03
HOXC11-201ENST00000243082 PPIAL4AQ9Y536 164 aa15.25■□□□□ 0.03
HOXC11-201ENST00000243082 PKDREJQ9NTG1 2253 aa15.24■□□□□ 0.03
HOXC11-201ENST00000243082 A0A1W2PPE3 182 aa15.24■□□□□ 0.03
HOXC11-201ENST00000243082 MARCH11A6NNE9 402 aa15.24■□□□□ 0.03
HOXC11-201ENST00000243082 AGPAT2O15120 278 aa15.24■□□□□ 0.03
HOXC11-201ENST00000243082 FCGR3BO75015 233 aa15.24■□□□□ 0.03
HOXC11-201ENST00000243082 MMP23AO75900 390 aa15.24■□□□□ 0.03
HOXC11-201ENST00000243082 CAMLGP49069 296 aa15.24■□□□□ 0.03
HOXC11-201ENST00000243082 ATRAIDQ6UW56 229 aa15.24■□□□□ 0.03
HOXC11-201ENST00000243082 ZNF439Q8NDP4 499 aa15.24■□□□□ 0.03
HOXC11-201ENST00000243082 MS4A5Q9H3V2 200 aa15.24■□□□□ 0.03
HOXC11-201ENST00000243082 DYNLRB1Q9NP97 96 aa15.24■□□□□ 0.03
HOXC11-201ENST00000243082 C19orf12Q9NSK7 152 aa15.24■□□□□ 0.03
HOXC11-201ENST00000243082 RELNP78509 3460 aa15.24■□□□□ 0.03
HOXC11-201ENST00000243082 SIAH2O43255 324 aa15.24■□□□□ 0.03
HOXC11-201ENST00000243082 DFFBO76075 338 aa15.24■□□□□ 0.03
HOXC11-201ENST00000243082 HPRT1P00492 218 aa15.24■□□□□ 0.03
HOXC11-201ENST00000243082 PRH1P02810 166 aa15.24■□□□□ 0.03
HOXC11-201ENST00000243082 NDUFB7P17568 137 aa15.24■□□□□ 0.03
HOXC11-201ENST00000243082 ZNF616Q08AN1 781 aa15.24■□□□□ 0.03
HOXC11-201ENST00000243082 SPANXN5Q5MJ07 72 aa15.24■□□□□ 0.03
HOXC11-201ENST00000243082 R3HDM4Q96D70 268 aa15.24■□□□□ 0.03
HOXC11-201ENST00000243082 TREM1Q9NP99 234 aa15.24■□□□□ 0.03
HOXC11-201ENST00000243082 UQCC1Q9NVA1 299 aa15.24■□□□□ 0.03
HOXC11-201ENST00000243082 SLC25A10Q9UBX3 287 aaPredicted RBP15.24■□□□□ 0.03
HOXC11-201ENST00000243082 TMA7Q9Y2S6 64 aaKnown RBP15.24■□□□□ 0.03
HOXC11-201ENST00000243082 hADV38S2A0JD32 116 aa15.23■□□□□ 0.03
HOXC11-201ENST00000243082 B9A039 149 aa15.23■□□□□ 0.03
HOXC11-201ENST00000243082 TRIM77I1YAP6 450 aa15.23■□□□□ 0.03
HOXC11-201ENST00000243082 NFYBP25208 207 aa15.23■□□□□ 0.03
HOXC11-201ENST00000243082 RUNX1Q01196 453 aa15.23■□□□□ 0.03
HOXC11-201ENST00000243082 SUN5Q8TC36 379 aa15.23■□□□□ 0.03
HOXC11-201ENST00000243082 DDB2Q92466 427 aa15.23■□□□□ 0.03
HOXC11-201ENST00000243082 GNPNAT1Q96EK6 184 aaPredicted RBP15.23■□□□□ 0.03
HOXC11-201ENST00000243082 LRRC46Q96FV0 321 aa15.23■□□□□ 0.03
HOXC11-201ENST00000243082 LINC00312Q9Y6C7 94 aa15.23■□□□□ 0.03
HOXC11-201ENST00000243082 CHD8Q9HCK8 2581 aa15.23■□□□□ 0.03
HOXC11-201ENST00000243082 MED19A0JLT2 244 aaPredicted RBP15.22■□□□□ 0.03
HOXC11-201ENST00000243082 RBFOX2O43251 390 aaKnown RBP eCLIP15.22■□□□□ 0.03
HOXC11-201ENST00000243082 TSPAN15O95858 294 aa15.22■□□□□ 0.03
HOXC11-201ENST00000243082 CD5P06127 495 aa15.22■□□□□ 0.03
HOXC11-201ENST00000243082 DEFA5Q01523 94 aa15.22■□□□□ 0.03
HOXC11-201ENST00000243082 C10orf91Q5T1B1 145 aa15.22■□□□□ 0.03
HOXC11-201ENST00000243082 TMEM14EPQ6UXP3 125 aa15.22■□□□□ 0.03
HOXC11-201ENST00000243082 ZNF251Q9BRH9 671 aa15.22■□□□□ 0.03
HOXC11-201ENST00000243082 NCOR2Q9Y618 2525 aa15.22■□□□□ 0.03
HOXC11-201ENST00000243082 SAA2-SAA4A0A096LPE2 208 aa15.22■□□□□ 0.03
HOXC11-201ENST00000243082 RNASEK-C17orf49H0YIS7 233 aa15.22■□□□□ 0.03
HOXC11-201ENST00000243082 SAA2P0DJI9 122 aaPredicted RBP15.22■□□□□ 0.03
HOXC11-201ENST00000243082 ZNF273Q14593 569 aa15.22■□□□□ 0.03
HOXC11-201ENST00000243082 PRAMEF5Q5TYX0 476 aa15.22■□□□□ 0.03
HOXC11-201ENST00000243082 ZNF525Q8N782 197 aa15.22■□□□□ 0.03
HOXC11-201ENST00000243082 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.22■□□□□ 0.03
HOXC11-201ENST00000243082 PRORYQ9H606 182 aa15.22■□□□□ 0.03
HOXC11-201ENST00000243082 CISD1Q9NZ45 108 aaKnown RBP15.22■□□□□ 0.03
HOXC11-201ENST00000243082 RPUSD1Q9UJJ7 312 aaKnown RBP15.22■□□□□ 0.03
HOXC11-201ENST00000243082 ARFGEF3Q5TH69 2177 aa15.21■□□□□ 0.03
HOXC11-201ENST00000243082 UMAD1C9J7I0 102 aa15.21■□□□□ 0.03
HOXC11-201ENST00000243082 OR9G9P0C7N8 305 aa15.21■□□□□ 0.03
HOXC11-201ENST00000243082 SNCAP37840 140 aa15.21■□□□□ 0.03
HOXC11-201ENST00000243082 MEF2CQ06413 473 aaPredicted RBP15.21■□□□□ 0.03
HOXC11-201ENST00000243082 BTN1A1Q13410 526 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms