RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 TEX38Q6PEX7 206 aa10.8□□□□□ -0.68
DDX39A-201ENST00000242776 BEST4Q8NFU0 473 aa10.8□□□□□ -0.68
DDX39A-201ENST00000242776 ARL11Q969Q4 196 aa10.8□□□□□ -0.68
DDX39A-201ENST00000242776 RBMXL1Q96E39 390 aaKnown RBP10.8□□□□□ -0.68
DDX39A-201ENST00000242776 CCDC32Q9BV29 185 aa10.8□□□□□ -0.68
DDX39A-201ENST00000242776 TAF9BQ9HBM6 251 aa10.8□□□□□ -0.68
DDX39A-201ENST00000242776 TAS2R8Q9NYW2 309 aa10.8□□□□□ -0.68
DDX39A-201ENST00000242776 MTFP1Q9UDX5 166 aa10.8□□□□□ -0.68
DDX39A-201ENST00000242776 ZNF230Q9UIE0 474 aaPredicted RBP10.8□□□□□ -0.68
DDX39A-201ENST00000242776 ANAPC10Q9UM13 185 aa10.8□□□□□ -0.68
DDX39A-201ENST00000242776 IGHV3-72A0A0B4J1Y9 119 aa10.79□□□□□ -0.68
DDX39A-201ENST00000242776 TRAV39A0A0B4J263 110 aa10.79□□□□□ -0.68
DDX39A-201ENST00000242776 KBTBD11-OT1A0A1B0GTJ5 212 aa10.79□□□□□ -0.68
DDX39A-201ENST00000242776 FAM90A9PA6NNJ1 464 aa10.79□□□□□ -0.68
DDX39A-201ENST00000242776 C12orf77C9JDV5 145 aa10.79□□□□□ -0.68
DDX39A-201ENST00000242776 CD34P28906 385 aa10.79□□□□□ -0.68
DDX39A-201ENST00000242776 SSTR5P35346 364 aa10.79□□□□□ -0.68
DDX39A-201ENST00000242776 INPP1P49441 399 aa10.79□□□□□ -0.68
DDX39A-201ENST00000242776 PPP5CP53041 499 aa10.79□□□□□ -0.68
DDX39A-201ENST00000242776 TAS2R46P59540 309 aa10.79□□□□□ -0.68
DDX39A-201ENST00000242776 C17orf58Q2M2W7 97 aa10.79□□□□□ -0.68
DDX39A-201ENST00000242776 ACTBL2Q562R1 376 aa10.79□□□□□ -0.68
DDX39A-201ENST00000242776 TRIQKQ629K1 86 aa10.79□□□□□ -0.68
DDX39A-201ENST00000242776 PRR18Q8N4B5 295 aa10.79□□□□□ -0.68
DDX39A-201ENST00000242776 COMMD1Q8N668 190 aa10.79□□□□□ -0.68
DDX39A-201ENST00000242776 GVQW1Q8N7I0 195 aa10.79□□□□□ -0.68
DDX39A-201ENST00000242776 OR10A7Q8NGE5 316 aa10.79□□□□□ -0.68
DDX39A-201ENST00000242776 OR4A4PQ8NGN8 299 aa10.79□□□□□ -0.68
DDX39A-201ENST00000242776 MAFIPQ8WZ33 124 aa10.79□□□□□ -0.68
DDX39A-201ENST00000242776 GALMQ96C23 342 aa10.79□□□□□ -0.68
DDX39A-201ENST00000242776 THAP7Q9BT49 309 aaPredicted RBP10.79□□□□□ -0.68
DDX39A-201ENST00000242776 ZNF107Q9UII5 783 aaPredicted RBP10.79□□□□□ -0.68
DDX39A-201ENST00000242776 A0A1W2PPE3 182 aa10.78□□□□□ -0.68
DDX39A-201ENST00000242776 A0A1W2PPI3 338 aa10.78□□□□□ -0.68
DDX39A-201ENST00000242776 FABP7O15540 132 aa10.78□□□□□ -0.68
DDX39A-201ENST00000242776 DIRAS3O95661 229 aa10.78□□□□□ -0.68
DDX39A-201ENST00000242776 IGHG2P01859 326 aa10.78□□□□□ -0.68
DDX39A-201ENST00000242776 HBZP02008 142 aa10.78□□□□□ -0.68
DDX39A-201ENST00000242776 CTXN2P0C2S0 81 aa10.78□□□□□ -0.68
DDX39A-201ENST00000242776 NAT1P18440 290 aa10.78□□□□□ -0.68
DDX39A-201ENST00000242776 REG1BP48304 166 aa10.78□□□□□ -0.68
DDX39A-201ENST00000242776 AP3S2P59780 193 aa10.78□□□□□ -0.68
DDX39A-201ENST00000242776 THNSL2Q86YJ6 484 aa10.78□□□□□ -0.68
DDX39A-201ENST00000242776 OR9G1Q8NH87 305 aa10.78□□□□□ -0.68
DDX39A-201ENST00000242776 IDI2-AS1Q9NZ38 188 aa10.78□□□□□ -0.68
DDX39A-201ENST00000242776 KLK11Q9UBX7 282 aa10.78□□□□□ -0.68
DDX39A-201ENST00000242776 ANXA10Q9UJ72 324 aa10.78□□□□□ -0.68
DDX39A-201ENST00000242776 OOSP1A8MZH6 123 aa10.77□□□□□ -0.69
DDX39A-201ENST00000242776 NPIPB11E5RHQ5 1161 aa10.77□□□□□ -0.69
DDX39A-201ENST00000242776 C15orf65H3BRN8 121 aa10.77□□□□□ -0.69
DDX39A-201ENST00000242776 CGB3P0DN86 165 aa10.77□□□□□ -0.69
DDX39A-201ENST00000242776 CGB7P0DN87 165 aa10.77□□□□□ -0.69
DDX39A-201ENST00000242776 TBPP20226 339 aa10.77□□□□□ -0.69
DDX39A-201ENST00000242776 OR3A3P47888 321 aa10.77□□□□□ -0.69
DDX39A-201ENST00000242776 TAS2R19P59542 299 aa10.77□□□□□ -0.69
DDX39A-201ENST00000242776 HTD2P86397 168 aa10.77□□□□□ -0.69
DDX39A-201ENST00000242776 STEAP3Q658P3 488 aa10.77□□□□□ -0.69
DDX39A-201ENST00000242776 MOB3BQ86TA1 216 aa10.77□□□□□ -0.69
DDX39A-201ENST00000242776 TMEM229BQ8NBD8 167 aa10.77□□□□□ -0.69
DDX39A-201ENST00000242776 OR5H2Q8NGV7 314 aa10.77□□□□□ -0.69
DDX39A-201ENST00000242776 IL1F10Q8WWZ1 152 aa10.77□□□□□ -0.69
DDX39A-201ENST00000242776 SNAPC3Q92966 411 aa10.77□□□□□ -0.69
DDX39A-201ENST00000242776 KIRREL1Q96J84 757 aa10.77□□□□□ -0.69
DDX39A-201ENST00000242776 OR5B12Q96R08 314 aa10.77□□□□□ -0.69
DDX39A-201ENST00000242776 CABLES2Q9BTV7 478 aa10.77□□□□□ -0.69
DDX39A-201ENST00000242776 ZMAT4Q9H898 229 aa10.77□□□□□ -0.69
DDX39A-201ENST00000242776 LINC00574Q9H8X3 128 aa10.77□□□□□ -0.69
DDX39A-201ENST00000242776 RBMX2Q9Y388 322 aaKnown RBP10.77□□□□□ -0.69
DDX39A-201ENST00000242776 AMMECR1Q9Y4X0 333 aaPredicted RBP10.77□□□□□ -0.69
DDX39A-201ENST00000242776 STARD9Q9P2P6 4700 aa10.77□□□□□ -0.69
DDX39A-201ENST00000242776 CSMD3Q7Z407 3707 aa10.76□□□□□ -0.69
DDX39A-201ENST00000242776 ZNF736B4DX44 427 aaPredicted RBP10.76□□□□□ -0.69
DDX39A-201ENST00000242776 J3QR06 171 aa10.76□□□□□ -0.69
DDX39A-201ENST00000242776 AP4M1O00189 453 aa10.76□□□□□ -0.69
DDX39A-201ENST00000242776 SDCBPO00560 298 aaPredicted RBP10.76□□□□□ -0.69
DDX39A-201ENST00000242776 HSPA12AO43301 675 aa10.76□□□□□ -0.69
DDX39A-201ENST00000242776 FGF16O43320 207 aa10.76□□□□□ -0.69
DDX39A-201ENST00000242776 RGS11O94810 467 aa10.76□□□□□ -0.69
DDX39A-201ENST00000242776 FCER2P06734 321 aa10.76□□□□□ -0.69
DDX39A-201ENST00000242776 SCTP09683 121 aa10.76□□□□□ -0.69
DDX39A-201ENST00000242776 FRMD6-AS1P0C7T7 363 aa10.76□□□□□ -0.69
DDX39A-201ENST00000242776 GSTT2P0CG29 244 aa10.76□□□□□ -0.69
DDX39A-201ENST00000242776 FAUP35544 74 aaKnown RBP10.76□□□□□ -0.69
DDX39A-201ENST00000242776 GPR12P47775 334 aa10.76□□□□□ -0.69
DDX39A-201ENST00000242776 FAM53AQ6NSI3 398 aaPredicted RBP10.76□□□□□ -0.69
DDX39A-201ENST00000242776 TOMM5Q8N4H5 51 aa10.76□□□□□ -0.69
DDX39A-201ENST00000242776 OR11H1Q8NG94 326 aa10.76□□□□□ -0.69
DDX39A-201ENST00000242776 OR5AP2Q8NGF4 316 aa10.76□□□□□ -0.69
DDX39A-201ENST00000242776 OR52M1Q8NGK5 317 aa10.76□□□□□ -0.69
DDX39A-201ENST00000242776 OR1L1Q8NH94 360 aa10.76□□□□□ -0.69
DDX39A-201ENST00000242776 RFESDQ8TAC1 157 aa10.76□□□□□ -0.69
DDX39A-201ENST00000242776 DEDD2Q8WXF8 326 aa10.76□□□□□ -0.69
DDX39A-201ENST00000242776 TRIM63Q969Q1 353 aa10.76□□□□□ -0.69
DDX39A-201ENST00000242776 GINS4Q9BRT9 223 aa10.76□□□□□ -0.69
DDX39A-201ENST00000242776 KRTAP17-1Q9BYP8 105 aa10.76□□□□□ -0.69
DDX39A-201ENST00000242776 JPT1Q9UK76 154 aa10.76□□□□□ -0.69
DDX39A-201ENST00000242776 ANKRD20A5PA0PJZ0 165 aa10.75□□□□□ -0.69
DDX39A-201ENST00000242776 BET1O15155 118 aa10.75□□□□□ -0.69
DDX39A-201ENST00000242776 AKAIN1P0CW23 69 aa10.75□□□□□ -0.69
DDX39A-201ENST00000242776 IL7P13232 177 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms