RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 NCR3LG1Q68D85 454 aa13.19□□□□□ -0.3
ITGA4-201ENST00000233573 CORO2AQ92828 525 aa13.19□□□□□ -0.3
ITGA4-201ENST00000233573 TSNAXQ99598 290 aaKnown RBP13.19□□□□□ -0.3
ITGA4-201ENST00000233573 CACFD1Q9UGQ2 172 aa13.19□□□□□ -0.3
ITGA4-201ENST00000233573 GAB2Q9UQC2 676 aa13.19□□□□□ -0.3
ITGA4-201ENST00000233573 HRNRQ86YZ3 2850 aaPredicted RBP13.19□□□□□ -0.3
ITGA4-201ENST00000233573 KRASP01116 189 aa13.19□□□□□ -0.3
ITGA4-201ENST00000233573 CD3EP07766 207 aa13.19□□□□□ -0.3
ITGA4-201ENST00000233573 GPR12P47775 334 aa13.19□□□□□ -0.3
ITGA4-201ENST00000233573 SULT1A1P50225 295 aa13.19□□□□□ -0.3
ITGA4-201ENST00000233573 TAS2R30P59541 319 aa13.19□□□□□ -0.3
ITGA4-201ENST00000233573 TMEM217Q8N7C4 229 aa13.19□□□□□ -0.3
ITGA4-201ENST00000233573 SAP30LQ9HAJ7 183 aa13.19□□□□□ -0.3
ITGA4-201ENST00000233573 GFOD1Q9NXC2 390 aa13.19□□□□□ -0.3
ITGA4-201ENST00000233573 HSPB7Q9UBY9 170 aa13.19□□□□□ -0.3
ITGA4-201ENST00000233573 TRGV10A0A0A0MS01 117 aa13.18□□□□□ -0.3
ITGA4-201ENST00000233573 TMEM218A2RU14 115 aa13.18□□□□□ -0.3
ITGA4-201ENST00000233573 LRRC30A6NM36 301 aa13.18□□□□□ -0.3
ITGA4-201ENST00000233573 VSTM5A8MXK1 200 aa13.18□□□□□ -0.3
ITGA4-201ENST00000233573 TNFRSF13BO14836 293 aaPredicted RBP13.18□□□□□ -0.3
ITGA4-201ENST00000233573 SLC31A2O15432 143 aa13.18□□□□□ -0.3
ITGA4-201ENST00000233573 ATP6V0CP27449 155 aa13.18□□□□□ -0.3
ITGA4-201ENST00000233573 F2RL1P55085 397 aa13.18□□□□□ -0.3
ITGA4-201ENST00000233573 C1orf229Q6ZS94 237 aaPredicted RBP13.18□□□□□ -0.3
ITGA4-201ENST00000233573 RAB9BQ9NP90 201 aa13.18□□□□□ -0.3
ITGA4-201ENST00000233573 LOC105371267A0A1B0GV96 52 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 H3BP45 60 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 TMEM178BH3BS89 294 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 RAB29O14966 203 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 FCN3O75636 299 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 ATG12O94817 140 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 RAB5CP51148 216 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 UBE2KP61086 200 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 AKR1C1Q04828 323 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 TNFRSF9Q07011 255 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 EFNB3Q15768 340 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 ZNF439Q8NDP4 499 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 ATP5SQ99766 215 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 EGLN1Q9GZT9 426 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 MS4A7Q9GZW8 240 aaPredicted RBP13.17□□□□□ -0.3
ITGA4-201ENST00000233573 LAMP3Q9UQV4 416 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 RFNGQ9Y644 331 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 ABCA4P78363 2273 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 IGHV3-7P01780 117 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 IAPPP10997 89 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 ADCYAP1P18509 176 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 FHITP49789 147 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 C4orf17Q53FE4 359 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 RPL39P5Q59GN2 51 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 CT45A1Q5HYN5 189 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 HAPLN4Q86UW8 402 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 STX12Q86Y82 276 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 CT45A3Q8NHU0 189 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 CD300LFQ8TDQ1 290 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 PSENENQ9NZ42 101 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 EPG5Q9HCE0 2579 aa13.17□□□□□ -0.3
ITGA4-201ENST00000233573 TRAV38-1A0A0B4J264 116 aa13.16□□□□□ -0.3
ITGA4-201ENST00000233573 ZNF729A6NN14 1252 aaPredicted RBP13.16□□□□□ -0.3
ITGA4-201ENST00000233573 C1QL1O75973 258 aa13.16□□□□□ -0.3
ITGA4-201ENST00000233573 APOBEC3AP31941 199 aaPredicted RBP13.16□□□□□ -0.3
ITGA4-201ENST00000233573 ARL16Q0P5N6 197 aa13.16□□□□□ -0.3
ITGA4-201ENST00000233573 TMEM267Q0VDI3 215 aaPredicted RBP13.16□□□□□ -0.3
ITGA4-201ENST00000233573 C10orf91Q5T1B1 145 aa13.16□□□□□ -0.3
ITGA4-201ENST00000233573 DDB2Q92466 427 aa13.16□□□□□ -0.3
ITGA4-201ENST00000233573 LRRC46Q96FV0 321 aa13.16□□□□□ -0.3
ITGA4-201ENST00000233573 RBKSQ9H477 322 aa13.16□□□□□ -0.3
ITGA4-201ENST00000233573 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.16□□□□□ -0.3
ITGA4-201ENST00000233573 APOC3P02656 99 aa13.16□□□□□ -0.3
ITGA4-201ENST00000233573 PRB1P04280 392 aa13.16□□□□□ -0.3
ITGA4-201ENST00000233573 RAB7AP51149 207 aa13.16□□□□□ -0.3
ITGA4-201ENST00000233573 ITLN2Q8WWU7 325 aaPredicted RBP13.16□□□□□ -0.3
ITGA4-201ENST00000233573 LEAP2Q969E1 77 aa13.16□□□□□ -0.3
ITGA4-201ENST00000233573 ZNF251Q9BRH9 671 aa13.16□□□□□ -0.3
ITGA4-201ENST00000233573 ABHD14AQ9BUJ0 271 aa13.16□□□□□ -0.3
ITGA4-201ENST00000233573 TMEM106BQ9NUM4 274 aa13.16□□□□□ -0.3
ITGA4-201ENST00000233573 STRAPQ9Y3F4 350 aaKnown RBP13.16□□□□□ -0.3
ITGA4-201ENST00000233573 ARFGEF3Q5TH69 2177 aa13.15□□□□□ -0.3
ITGA4-201ENST00000233573 DCHS2Q6V1P9 2916 aa13.15□□□□□ -0.3
ITGA4-201ENST00000233573 PPIAL4EA0A075B759 164 aa13.15□□□□□ -0.3
ITGA4-201ENST00000233573 NKX6-3A6NJ46 265 aa13.15□□□□□ -0.3
ITGA4-201ENST00000233573 MARCH11A6NNE9 402 aa13.15□□□□□ -0.3
ITGA4-201ENST00000233573 PPIAL4DF5H284 164 aa13.15□□□□□ -0.3
ITGA4-201ENST00000233573 M0R1X1 148 aa13.15□□□□□ -0.3
ITGA4-201ENST00000233573 TMPRSS2O15393 492 aa13.15□□□□□ -0.3
ITGA4-201ENST00000233573 RBFOX2O43251 390 aaKnown RBP eCLIP13.15□□□□□ -0.3
ITGA4-201ENST00000233573 MMP23AO75900 390 aa13.15□□□□□ -0.3
ITGA4-201ENST00000233573 CD5P06127 495 aa13.15□□□□□ -0.3
ITGA4-201ENST00000233573 PPIAL4FP0DN26 164 aa13.15□□□□□ -0.3
ITGA4-201ENST00000233573 TMEM182Q6ZP80 229 aaPredicted RBP13.15□□□□□ -0.3
ITGA4-201ENST00000233573 C1orf87Q8N0U7 546 aa13.15□□□□□ -0.3
ITGA4-201ENST00000233573 BBC3Q96PG8 261 aaPredicted RBP13.15□□□□□ -0.3
ITGA4-201ENST00000233573 MS4A5Q9H3V2 200 aa13.15□□□□□ -0.3
ITGA4-201ENST00000233573 IDI2-AS1Q9NZ38 188 aa13.15□□□□□ -0.3
ITGA4-201ENST00000233573 RALYQ9UKM9 306 aaKnown RBP13.15□□□□□ -0.3
ITGA4-201ENST00000233573 PPIAL4AQ9Y536 164 aa13.15□□□□□ -0.3
ITGA4-201ENST00000233573 TRIM77I1YAP6 450 aa13.14□□□□□ -0.31
ITGA4-201ENST00000233573 DFFBO76075 338 aa13.14□□□□□ -0.31
ITGA4-201ENST00000233573 LOXP28300 417 aaPredicted RBP13.14□□□□□ -0.31
ITGA4-201ENST00000233573 TMEM30BQ3MIR4 351 aa13.14□□□□□ -0.31
ITGA4-201ENST00000233573 AARDQ4LEZ3 155 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms