RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 FCGR2CP31995 323 aa8.98□□□□□ -0.97
SF3B6-201ENST00000233468 S100A5P33763 92 aa8.98□□□□□ -0.97
SF3B6-201ENST00000233468 PROK1P58294 105 aa8.98□□□□□ -0.97
SF3B6-201ENST00000233468 HERV-K104P61576 105 aa8.98□□□□□ -0.97
SF3B6-201ENST00000233468 SSBP1Q04837 148 aaKnown RBP8.98□□□□□ -0.97
SF3B6-201ENST00000233468 MMDQ15546 238 aa8.98□□□□□ -0.97
SF3B6-201ENST00000233468 MSMO1Q15800 293 aa8.98□□□□□ -0.97
SF3B6-201ENST00000233468 RTL8BQ17RB0 113 aa8.98□□□□□ -0.97
SF3B6-201ENST00000233468 PYHIN1Q6K0P9 492 aa8.98□□□□□ -0.97
SF3B6-201ENST00000233468 FOXRED2Q8IWF2 684 aa8.98□□□□□ -0.97
SF3B6-201ENST00000233468 Q8N6K4 173 aa8.98□□□□□ -0.97
SF3B6-201ENST00000233468 C5orf56Q8N8D9 126 aa8.98□□□□□ -0.97
SF3B6-201ENST00000233468 ZBTB34Q8NCN2 500 aa8.98□□□□□ -0.97
SF3B6-201ENST00000233468 WFDC12Q8WWY7 111 aa8.98□□□□□ -0.97
SF3B6-201ENST00000233468 FLYWCH2Q96CP2 140 aaKnown RBP8.98□□□□□ -0.97
SF3B6-201ENST00000233468 DGCR14Q96DF8 476 aaKnown RBP8.98□□□□□ -0.97
SF3B6-201ENST00000233468 TSNAXQ99598 290 aaKnown RBP8.98□□□□□ -0.97
SF3B6-201ENST00000233468 GON7Q9BXV9 100 aa8.98□□□□□ -0.97
SF3B6-201ENST00000233468 SLIRPQ9GZT3 109 aaKnown RBP8.98□□□□□ -0.97
SF3B6-201ENST00000233468 SDHAF2Q9NX18 166 aa8.98□□□□□ -0.97
SF3B6-201ENST00000233468 EHFQ9NZC4 300 aa8.98□□□□□ -0.97
SF3B6-201ENST00000233468 ANAPC10Q9UM13 185 aa8.98□□□□□ -0.97
SF3B6-201ENST00000233468 PRELID3BQ9Y3B1 194 aa8.98□□□□□ -0.97
SF3B6-201ENST00000233468 A3GALT2U3KPV4 340 aa8.98□□□□□ -0.97
SF3B6-201ENST00000233468 ZNF736B4DX44 427 aaPredicted RBP8.97□□□□□ -0.97
SF3B6-201ENST00000233468 H0YJW9 148 aa8.97□□□□□ -0.97
SF3B6-201ENST00000233468 NBR2O15453 112 aa8.97□□□□□ -0.97
SF3B6-201ENST00000233468 TUSC2O75896 110 aa8.97□□□□□ -0.97
SF3B6-201ENST00000233468 TBPP20226 339 aa8.97□□□□□ -0.97
SF3B6-201ENST00000233468 S100GP29377 79 aa8.97□□□□□ -0.97
SF3B6-201ENST00000233468 LGALS7P47929 136 aa8.97□□□□□ -0.97
SF3B6-201ENST00000233468 TSPAN5P62079 268 aa8.97□□□□□ -0.97
SF3B6-201ENST00000233468 DYRK1AQ13627 763 aa8.97□□□□□ -0.97
SF3B6-201ENST00000233468 IL18Q14116 193 aa8.97□□□□□ -0.97
SF3B6-201ENST00000233468 FAM131AQ6UXB0 335 aa8.97□□□□□ -0.97
SF3B6-201ENST00000233468 C8orf86Q6ZUL3 223 aa8.97□□□□□ -0.97
SF3B6-201ENST00000233468 OVCH2Q7RTZ1 564 aa8.97□□□□□ -0.97
SF3B6-201ENST00000233468 TMEM17Q86X19 198 aa8.97□□□□□ -0.97
SF3B6-201ENST00000233468 LAX1Q8IWV1 398 aa8.97□□□□□ -0.97
SF3B6-201ENST00000233468 OR6F1Q8NGZ6 308 aa8.97□□□□□ -0.97
SF3B6-201ENST00000233468 SNAPC3Q92966 411 aa8.97□□□□□ -0.97
SF3B6-201ENST00000233468 HSD17B10Q99714 261 aaKnown RBP8.97□□□□□ -0.97
SF3B6-201ENST00000233468 DCUN1D5Q9BTE7 237 aa8.97□□□□□ -0.97
SF3B6-201ENST00000233468 NXF2Q9GZY0 626 aaKnown RBP8.97□□□□□ -0.97
SF3B6-201ENST00000233468 RBM38Q9H0Z9 239 aaKnown RBP8.97□□□□□ -0.97
SF3B6-201ENST00000233468 SLC35D1Q9NTN3 355 aa8.97□□□□□ -0.97
SF3B6-201ENST00000233468 FABP12A6NFH5 140 aa8.96□□□□□ -0.98
SF3B6-201ENST00000233468 GABARAPH6UMI1 98 aa8.96□□□□□ -0.98
SF3B6-201ENST00000233468 CTDSPLO15194 276 aa8.96□□□□□ -0.98
SF3B6-201ENST00000233468 SPDEFO95238 335 aa8.96□□□□□ -0.98
SF3B6-201ENST00000233468 PPYP01298 95 aa8.96□□□□□ -0.98
SF3B6-201ENST00000233468 PMP2P02689 132 aa8.96□□□□□ -0.98
SF3B6-201ENST00000233468 IFNA6P05013 189 aa8.96□□□□□ -0.98
SF3B6-201ENST00000233468 FCER2P06734 321 aa8.96□□□□□ -0.98
SF3B6-201ENST00000233468 VSIG10L2P0DP72 767 aa8.96□□□□□ -0.98
SF3B6-201ENST00000233468 HLA-DMAP28067 261 aa8.96□□□□□ -0.98
SF3B6-201ENST00000233468 RPS16P62249 146 aaKnown RBP8.96□□□□□ -0.98
SF3B6-201ENST00000233468 SLC35B1P78383 322 aa8.96□□□□□ -0.98
SF3B6-201ENST00000233468 PLGLAQ15195 96 aa8.96□□□□□ -0.98
SF3B6-201ENST00000233468 LPCAT3Q6P1A2 487 aa8.96□□□□□ -0.98
SF3B6-201ENST00000233468 DHRS11Q6UWP2 260 aa8.96□□□□□ -0.98
SF3B6-201ENST00000233468 ZNF66Q6ZN08 573 aa8.96□□□□□ -0.98
SF3B6-201ENST00000233468 SLC35E3Q7Z769 313 aa8.96□□□□□ -0.98
SF3B6-201ENST00000233468 CENPVQ7Z7K6 275 aaPredicted RBP8.96□□□□□ -0.98
SF3B6-201ENST00000233468 KLHDC1Q8N7A1 406 aa8.96□□□□□ -0.98
SF3B6-201ENST00000233468 DRAXINQ8NBI3 349 aaPredicted RBP8.96□□□□□ -0.98
SF3B6-201ENST00000233468 NPBQ8NG41 125 aa8.96□□□□□ -0.98
SF3B6-201ENST00000233468 CHPT1Q8WUD6 406 aa8.96□□□□□ -0.98
SF3B6-201ENST00000233468 MIXL1Q9H2W2 232 aa8.96□□□□□ -0.98
SF3B6-201ENST00000233468 SERTAD4Q9NUC0 356 aa8.96□□□□□ -0.98
SF3B6-201ENST00000233468 TAS2R8Q9NYW2 309 aa8.96□□□□□ -0.98
SF3B6-201ENST00000233468 ZNF107Q9UII5 783 aaPredicted RBP8.96□□□□□ -0.98
SF3B6-201ENST00000233468 SIGLEC9Q9Y336 463 aa8.96□□□□□ -0.98
SF3B6-201ENST00000233468 RBMX2Q9Y388 322 aaKnown RBP8.96□□□□□ -0.98
SF3B6-201ENST00000233468 J3QRK9 145 aa8.95□□□□□ -0.98
SF3B6-201ENST00000233468 AP4M1O00189 453 aa8.95□□□□□ -0.98
SF3B6-201ENST00000233468 IGHG2P01859 326 aa8.95□□□□□ -0.98
SF3B6-201ENST00000233468 AMY1AP04745 511 aa8.95□□□□□ -0.98
SF3B6-201ENST00000233468 AMY2AP04746 511 aa8.95□□□□□ -0.98
SF3B6-201ENST00000233468 AADACP22760 399 aa8.95□□□□□ -0.98
SF3B6-201ENST00000233468 DUTP33316 252 aaKnown RBP8.95□□□□□ -0.98
SF3B6-201ENST00000233468 HRH1P35367 487 aa8.95□□□□□ -0.98
SF3B6-201ENST00000233468 KIR2DS2P43631 304 aa8.95□□□□□ -0.98
SF3B6-201ENST00000233468 RFX2P48378 723 aa8.95□□□□□ -0.98
SF3B6-201ENST00000233468 CATR1Q13166 79 aa8.95□□□□□ -0.98
SF3B6-201ENST00000233468 LIN54Q6MZP7 749 aa8.95□□□□□ -0.98
SF3B6-201ENST00000233468 GLDNQ6ZMI3 551 aaPredicted RBP8.95□□□□□ -0.98
SF3B6-201ENST00000233468 CMTM1Q8IZ96 169 aa8.95□□□□□ -0.98
SF3B6-201ENST00000233468 FAM71E2Q8N5Q1 922 aa8.95□□□□□ -0.98
SF3B6-201ENST00000233468 Q8N9W7 124 aa8.95□□□□□ -0.98
SF3B6-201ENST00000233468 ZNF383Q8NA42 475 aa8.95□□□□□ -0.98
SF3B6-201ENST00000233468 SECTM1Q8WVN6 248 aa8.95□□□□□ -0.98
SF3B6-201ENST00000233468 CITED1Q99966 193 aa8.95□□□□□ -0.98
SF3B6-201ENST00000233468 AIFM2Q9BRQ8 373 aa8.95□□□□□ -0.98
SF3B6-201ENST00000233468 ZNF2Q9BSG1 426 aaPredicted RBP8.95□□□□□ -0.98
SF3B6-201ENST00000233468 SLC5A7Q9GZV3 580 aa8.95□□□□□ -0.98
SF3B6-201ENST00000233468 PLSCR3Q9NRY6 295 aa8.95□□□□□ -0.98
SF3B6-201ENST00000233468 MTFP1Q9UDX5 166 aa8.95□□□□□ -0.98
SF3B6-201ENST00000233468 PRKDCP78527 4128 aaKnown RBP8.95□□□□□ -0.98
SF3B6-201ENST00000233468 M0QZ24 198 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms