RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 TMEM170AQ8WVE7 144 aa7.98□□□□□ -1.13
HLA-DOA-201ENST00000229829 SPSB4Q96A44 273 aa7.98□□□□□ -1.13
HLA-DOA-201ENST00000229829 FAM122AQ96E09 287 aa7.98□□□□□ -1.13
HLA-DOA-201ENST00000229829 SGCZQ96LD1 299 aa7.98□□□□□ -1.13
HLA-DOA-201ENST00000229829 SMDT1Q9H4I9 107 aa7.98□□□□□ -1.13
HLA-DOA-201ENST00000229829 SIT1Q9Y3P8 196 aa7.98□□□□□ -1.13
HLA-DOA-201ENST00000229829 PCSK5Q92824 1860 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 MED12LQ86YW9 2145 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 ZNF732B4DXR9 585 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 TPPP2P59282 170 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 PCBD1P61457 104 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 SP5Q6BEB4 398 aaPredicted RBP7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 PPP1R32Q7Z5V6 425 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 WDR5BQ86VZ2 330 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 UBALD1Q8TB05 177 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 KCNE4Q8WWG9 221 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 RDH5Q92781 318 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 ZNF391Q9UJN7 358 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 A0A1B0GW64 132 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 DNPH1O43598 174 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 HRASP01112 189 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 THBS3P49746 956 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 RIPPLY2Q5TAB7 128 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 FBXW9Q5XUX1 488 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 Q6ZRM9 215 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 ZNF295-AS1Q8N0V1 137 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 SIGLECL1Q8N7X8 197 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 MSRB2Q9Y3D2 182 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 RNF115Q9Y4L5 304 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 KIAA1324LA8MWY0 1029 aaPredicted RBP7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 DIRC3C9JPN6 131 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 MRPL33O75394 65 aaKnown RBP7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 PGLYRP1O75594 196 aaPredicted RBP7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 CYC1P08574 325 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 VDAC1P21796 283 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 CBLN1P23435 193 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 UCP1P25874 307 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 FGF12P61328 243 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 KIAA1644Q3SXP7 199 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 PCSK4Q6UW60 755 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 COLCA1Q6ZS62 124 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 OR51G1Q8NGK1 321 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 PRDM14Q9GZV8 571 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 TMEM106BQ9NUM4 274 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 CFAP47Q6ZTR5 3102 aa7.97□□□□□ -1.13
HLA-DOA-201ENST00000229829 F6UZH7 168 aa7.96□□□□□ -1.13
HLA-DOA-201ENST00000229829 TUSC2O75896 110 aa7.96□□□□□ -1.13
HLA-DOA-201ENST00000229829 GYPAP02724 150 aa7.96□□□□□ -1.13
HLA-DOA-201ENST00000229829 PAX1P15863 534 aa7.96□□□□□ -1.13
HLA-DOA-201ENST00000229829 AMTP48728 403 aa7.96□□□□□ -1.13
HLA-DOA-201ENST00000229829 RND2P52198 227 aa7.96□□□□□ -1.13
HLA-DOA-201ENST00000229829 PPP1CBP62140 327 aa7.96□□□□□ -1.13
HLA-DOA-201ENST00000229829 RPL23P62829 140 aaKnown RBP7.96□□□□□ -1.13
HLA-DOA-201ENST00000229829 SLC35B1P78383 322 aa7.96□□□□□ -1.13
HLA-DOA-201ENST00000229829 SRPXP78539 464 aa7.96□□□□□ -1.13
HLA-DOA-201ENST00000229829 ZFP36L1Q07352 338 aaKnown RBP7.96□□□□□ -1.13
HLA-DOA-201ENST00000229829 SPANXN5Q5MJ07 72 aa7.96□□□□□ -1.13
HLA-DOA-201ENST00000229829 FFAR4Q5NUL3 377 aa7.96□□□□□ -1.13
HLA-DOA-201ENST00000229829 PMS2CLQ68D20 193 aa7.96□□□□□ -1.13
HLA-DOA-201ENST00000229829 TUSC5Q8IXB3 177 aa7.96□□□□□ -1.13
HLA-DOA-201ENST00000229829 ZNF738Q8NE65 137 aa7.96□□□□□ -1.13
HLA-DOA-201ENST00000229829 OR5AU1Q8NGC0 362 aa7.96□□□□□ -1.13
HLA-DOA-201ENST00000229829 MRPL30Q8TCC3 161 aaKnown RBP7.96□□□□□ -1.13
HLA-DOA-201ENST00000229829 PSMF1Q92530 271 aa7.96□□□□□ -1.13
HLA-DOA-201ENST00000229829 ST6GALNAC6Q969X2 333 aa7.96□□□□□ -1.13
HLA-DOA-201ENST00000229829 RCC1LQ96I51 464 aaKnown RBP7.96□□□□□ -1.13
HLA-DOA-201ENST00000229829 HES7Q9BYE0 225 aa7.96□□□□□ -1.13
HLA-DOA-201ENST00000229829 PARLQ9H300 379 aa7.96□□□□□ -1.13
HLA-DOA-201ENST00000229829 KIR2DL5BA0A0G2JN68 375 aa7.96□□□□□ -1.14
HLA-DOA-201ENST00000229829 KIR2DL5BA0A0G2JPC4 375 aa7.96□□□□□ -1.14
HLA-DOA-201ENST00000229829 UBE2L5PA0A1B0GUS4 154 aa7.96□□□□□ -1.14
HLA-DOA-201ENST00000229829 NTN3O00634 580 aaPredicted RBP7.96□□□□□ -1.14
HLA-DOA-201ENST00000229829 RBMXL2O75526 392 aaKnown RBP7.96□□□□□ -1.14
HLA-DOA-201ENST00000229829 SERF1AO75920 110 aa7.96□□□□□ -1.14
HLA-DOA-201ENST00000229829 PSG2P11465 335 aa7.96□□□□□ -1.14
HLA-DOA-201ENST00000229829 CRISP2P16562 243 aa7.96□□□□□ -1.14
HLA-DOA-201ENST00000229829 PSMB3P49720 205 aa7.96□□□□□ -1.14
HLA-DOA-201ENST00000229829 GFRA1P56159 465 aa7.96□□□□□ -1.14
HLA-DOA-201ENST00000229829 KIR2DL5AQ8N109 375 aa7.96□□□□□ -1.14
HLA-DOA-201ENST00000229829 IL1F10Q8WWZ1 152 aa7.96□□□□□ -1.14
HLA-DOA-201ENST00000229829 GPR146Q96CH1 333 aa7.96□□□□□ -1.14
HLA-DOA-201ENST00000229829 SPIN2AQ99865 258 aa7.96□□□□□ -1.14
HLA-DOA-201ENST00000229829 SPIN2BQ9BPZ2 258 aa7.96□□□□□ -1.14
HLA-DOA-201ENST00000229829 CTDSP1Q9GZU7 261 aa7.96□□□□□ -1.14
HLA-DOA-201ENST00000229829 OR6C3Q9NZP0 311 aa7.96□□□□□ -1.14
HLA-DOA-201ENST00000229829 MED13Q9UHV7 2174 aa7.96□□□□□ -1.14
HLA-DOA-201ENST00000229829 TNFSF13O75888 250 aa7.95□□□□□ -1.14
HLA-DOA-201ENST00000229829 GOSR1O95249 250 aa7.95□□□□□ -1.14
HLA-DOA-201ENST00000229829 PFN1P07737 140 aaKnown RBP7.95□□□□□ -1.14
HLA-DOA-201ENST00000229829 IL3RAP26951 378 aa7.95□□□□□ -1.14
HLA-DOA-201ENST00000229829 Q6ZWC4 215 aa7.95□□□□□ -1.14
HLA-DOA-201ENST00000229829 SGMS2Q8NHU3 365 aa7.95□□□□□ -1.14
HLA-DOA-201ENST00000229829 LAMTOR2Q9Y2Q5 125 aa7.95□□□□□ -1.14
HLA-DOA-201ENST00000229829 ATP23Q9Y6H3 246 aa7.95□□□□□ -1.14
HLA-DOA-201ENST00000229829 PTPRBP23467 1997 aa7.95□□□□□ -1.14
HLA-DOA-201ENST00000229829 CLEC18AA5D8T8 446 aa7.95□□□□□ -1.14
HLA-DOA-201ENST00000229829 C1QTNF9BB2RNN3 333 aa7.95□□□□□ -1.14
HLA-DOA-201ENST00000229829 TRAPPC2LH3BP13 241 aa7.95□□□□□ -1.14
HLA-DOA-201ENST00000229829 KLF3P57682 345 aaPredicted RBP7.95□□□□□ -1.14
HLA-DOA-201ENST00000229829 RPL19P84098 196 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms