RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 CD300LFQ8TDQ1 290 aa14.21□□□□□ -0.13
RABGGTA-201ENST00000216840 MARC2Q969Z3 335 aa14.21□□□□□ -0.13
RABGGTA-201ENST00000216840 C19orf12Q9NSK7 152 aa14.21□□□□□ -0.13
RABGGTA-201ENST00000216840 LAMP3Q9UQV4 416 aa14.21□□□□□ -0.13
RABGGTA-201ENST00000216840 LINC00312Q9Y6C7 94 aa14.21□□□□□ -0.13
RABGGTA-201ENST00000216840 WSB1Q9Y6I7 421 aa14.21□□□□□ -0.13
RABGGTA-201ENST00000216840 IGHV1-69-2A0A0G2JMI3 117 aa14.21□□□□□ -0.14
RABGGTA-201ENST00000216840 A0A1W2PPE3 182 aa14.21□□□□□ -0.14
RABGGTA-201ENST00000216840 FAM90A26D6RGX4 464 aa14.21□□□□□ -0.14
RABGGTA-201ENST00000216840 H3BP45 60 aa14.21□□□□□ -0.14
RABGGTA-201ENST00000216840 SPP1P10451 314 aa14.21□□□□□ -0.14
RABGGTA-201ENST00000216840 IAPPP10997 89 aa14.21□□□□□ -0.14
RABGGTA-201ENST00000216840 NFYBP25208 207 aa14.21□□□□□ -0.14
RABGGTA-201ENST00000216840 TMEM204Q9BSN7 226 aa14.21□□□□□ -0.14
RABGGTA-201ENST00000216840 ITPR1Q14643 2758 aa14.2□□□□□ -0.14
RABGGTA-201ENST00000216840 RAB29O14966 203 aa14.2□□□□□ -0.14
RABGGTA-201ENST00000216840 MED6O75586 246 aa14.2□□□□□ -0.14
RABGGTA-201ENST00000216840 MEF2CQ06413 473 aaPredicted RBP14.2□□□□□ -0.14
RABGGTA-201ENST00000216840 ZNF273Q14593 569 aa14.2□□□□□ -0.14
RABGGTA-201ENST00000216840 TMEM30BQ3MIR4 351 aa14.2□□□□□ -0.14
RABGGTA-201ENST00000216840 PRAMEF5Q5TYX0 476 aa14.2□□□□□ -0.14
RABGGTA-201ENST00000216840 CCDC28AQ8IWP9 274 aa14.2□□□□□ -0.14
RABGGTA-201ENST00000216840 TMEM217Q8N7C4 229 aa14.2□□□□□ -0.14
RABGGTA-201ENST00000216840 HSD17B11Q8NBQ5 300 aa14.2□□□□□ -0.14
RABGGTA-201ENST00000216840 KALRNO60229 2985 aa14.2□□□□□ -0.14
RABGGTA-201ENST00000216840 KRBOX1C9JBD0 128 aa14.19□□□□□ -0.14
RABGGTA-201ENST00000216840 RPL31P62899 125 aaKnown RBP14.19□□□□□ -0.14
RABGGTA-201ENST00000216840 ZNF266Q14584 549 aa14.19□□□□□ -0.14
RABGGTA-201ENST00000216840 PXDC1Q5TGL8 231 aa14.19□□□□□ -0.14
RABGGTA-201ENST00000216840 SH3BGRL3Q9H299 93 aa14.19□□□□□ -0.14
RABGGTA-201ENST00000216840 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.19□□□□□ -0.14
RABGGTA-201ENST00000216840 PSENENQ9NZ42 101 aa14.19□□□□□ -0.14
RABGGTA-201ENST00000216840 HSPB7Q9UBY9 170 aa14.19□□□□□ -0.14
RABGGTA-201ENST00000216840 RPUSD1Q9UJJ7 312 aaKnown RBP14.19□□□□□ -0.14
RABGGTA-201ENST00000216840 RAB19A4D1S5 217 aa14.19□□□□□ -0.14
RABGGTA-201ENST00000216840 FCGR3BO75015 233 aa14.19□□□□□ -0.14
RABGGTA-201ENST00000216840 SULT1A1P50225 295 aa14.19□□□□□ -0.14
RABGGTA-201ENST00000216840 TAS2R30P59541 319 aa14.19□□□□□ -0.14
RABGGTA-201ENST00000216840 UBE2KP61086 200 aa14.19□□□□□ -0.14
RABGGTA-201ENST00000216840 TNFRSF9Q07011 255 aa14.19□□□□□ -0.14
RABGGTA-201ENST00000216840 TMEM267Q0VDI3 215 aaPredicted RBP14.19□□□□□ -0.14
RABGGTA-201ENST00000216840 H2BFWTQ7Z2G1 175 aa14.19□□□□□ -0.14
RABGGTA-201ENST00000216840 STX12Q86Y82 276 aa14.19□□□□□ -0.14
RABGGTA-201ENST00000216840 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.19□□□□□ -0.14
RABGGTA-201ENST00000216840 RBKSQ9H477 322 aa14.19□□□□□ -0.14
RABGGTA-201ENST00000216840 CTSZQ9UBR2 303 aa14.19□□□□□ -0.14
RABGGTA-201ENST00000216840 SAA2-SAA4A0A096LPE2 208 aa14.18□□□□□ -0.14
RABGGTA-201ENST00000216840 MARCH11A6NNE9 402 aa14.18□□□□□ -0.14
RABGGTA-201ENST00000216840 NDUFB3O43676 98 aa14.18□□□□□ -0.14
RABGGTA-201ENST00000216840 SAA2P0DJI9 122 aaPredicted RBP14.18□□□□□ -0.14
RABGGTA-201ENST00000216840 BLOC1S1P78537 153 aa14.18□□□□□ -0.14
RABGGTA-201ENST00000216840 DDB2Q92466 427 aa14.18□□□□□ -0.14
RABGGTA-201ENST00000216840 R3HDM4Q96D70 268 aa14.18□□□□□ -0.14
RABGGTA-201ENST00000216840 ZNF251Q9BRH9 671 aa14.18□□□□□ -0.14
RABGGTA-201ENST00000216840 MMP26Q9NRE1 261 aa14.18□□□□□ -0.14
RABGGTA-201ENST00000216840 KAAG1Q9UBP8 84 aa14.18□□□□□ -0.14
RABGGTA-201ENST00000216840 MED19A0JLT2 244 aaPredicted RBP14.18□□□□□ -0.14
RABGGTA-201ENST00000216840 RBFOX2O43251 390 aaKnown RBP eCLIP14.18□□□□□ -0.14
RABGGTA-201ENST00000216840 HPRT1P00492 218 aa14.18□□□□□ -0.14
RABGGTA-201ENST00000216840 LRRC10Q5BKY1 277 aa14.18□□□□□ -0.14
RABGGTA-201ENST00000216840 TMEM200BQ69YZ2 307 aa14.18□□□□□ -0.14
RABGGTA-201ENST00000216840 GAL3ST2Q9H3Q3 398 aa14.18□□□□□ -0.14
RABGGTA-201ENST00000216840 PARP11Q9NR21 331 aa14.18□□□□□ -0.14
RABGGTA-201ENST00000216840 RELNP78509 3460 aa14.17□□□□□ -0.14
RABGGTA-201ENST00000216840 HIVEP3Q5T1R4 2406 aa14.17□□□□□ -0.14
RABGGTA-201ENST00000216840 TMEM8BA6NDV4 472 aa14.17□□□□□ -0.14
RABGGTA-201ENST00000216840 NUDT19A8MXV4 375 aa14.17□□□□□ -0.14
RABGGTA-201ENST00000216840 DANCRP0C864 163 aa14.17□□□□□ -0.14
RABGGTA-201ENST00000216840 GNG10P50151 68 aa14.17□□□□□ -0.14
RABGGTA-201ENST00000216840 TUSC1Q2TAM9 212 aa14.17□□□□□ -0.14
RABGGTA-201ENST00000216840 HFEQ30201 348 aa14.17□□□□□ -0.14
RABGGTA-201ENST00000216840 UQCC3Q6UW78 93 aa14.17□□□□□ -0.14
RABGGTA-201ENST00000216840 BTNL8Q6UX41 500 aa14.17□□□□□ -0.14
RABGGTA-201ENST00000216840 OR10A7Q8NGE5 316 aa14.17□□□□□ -0.14
RABGGTA-201ENST00000216840 ATP5SQ99766 215 aa14.17□□□□□ -0.14
RABGGTA-201ENST00000216840 HRH4Q9H3N8 390 aa14.17□□□□□ -0.14
RABGGTA-201ENST00000216840 PRELID3BQ9Y3B1 194 aa14.17□□□□□ -0.14
RABGGTA-201ENST00000216840 DVL1O14640 695 aa14.16□□□□□ -0.14
RABGGTA-201ENST00000216840 ATP6V0CP27449 155 aa14.16□□□□□ -0.14
RABGGTA-201ENST00000216840 KIR2DS2P43631 304 aa14.16□□□□□ -0.14
RABGGTA-201ENST00000216840 ERVFRD-1P60508 538 aa14.16□□□□□ -0.14
RABGGTA-201ENST00000216840 MRPS11P82912 194 aaKnown RBP14.16□□□□□ -0.14
RABGGTA-201ENST00000216840 Q6ZRG5 221 aa14.16□□□□□ -0.14
RABGGTA-201ENST00000216840 SLC25A48Q6ZT89 311 aaKnown RBP14.16□□□□□ -0.14
RABGGTA-201ENST00000216840 LYG1Q8N1E2 194 aa14.16□□□□□ -0.14
RABGGTA-201ENST00000216840 STPG2Q8N412 459 aa14.16□□□□□ -0.14
RABGGTA-201ENST00000216840 BPIFCQ8NFQ6 507 aa14.16□□□□□ -0.14
RABGGTA-201ENST00000216840 ZNF714Q96N38 554 aa14.16□□□□□ -0.14
RABGGTA-201ENST00000216840 S1PR3Q99500 378 aa14.16□□□□□ -0.14
RABGGTA-201ENST00000216840 NDUFA2O43678 99 aa14.16□□□□□ -0.14
RABGGTA-201ENST00000216840 CCL3L1P16619 93 aa14.16□□□□□ -0.14
RABGGTA-201ENST00000216840 COL8A2P25067 703 aa14.16□□□□□ -0.14
RABGGTA-201ENST00000216840 IL34Q6ZMJ4 242 aa14.16□□□□□ -0.14
RABGGTA-201ENST00000216840 H1FXQ92522 213 aaKnown RBP14.16□□□□□ -0.14
RABGGTA-201ENST00000216840 CACFD1Q9UGQ2 172 aa14.16□□□□□ -0.14
RABGGTA-201ENST00000216840 RFNGQ9Y644 331 aa14.16□□□□□ -0.14
RABGGTA-201ENST00000216840 ABCA4P78363 2273 aa14.16□□□□□ -0.14
RABGGTA-201ENST00000216840 PKD1L2Q7Z442 2459 aa14.16□□□□□ -0.14
RABGGTA-201ENST00000216840 DOCK11Q5JSL3 2073 aa14.15□□□□□ -0.14
RABGGTA-201ENST00000216840 TPRP12270 2363 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms