RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 RAB39BQ96DA2 213 aa14.36□□□□□ -0.11
VRK1-201ENST00000216639 ADTRPQ96IZ2 230 aa14.36□□□□□ -0.11
VRK1-201ENST00000216639 ZNF714Q96N38 554 aa14.36□□□□□ -0.11
VRK1-201ENST00000216639 RPUSD1Q9UJJ7 312 aaKnown RBP14.36□□□□□ -0.11
VRK1-201ENST00000216639 SLC31A2O15432 143 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 SPP1P10451 314 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 DAOP14920 347 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 DYNLT3P51808 116 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 ARHGDIBP52566 201 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 TNFRSF9Q07011 255 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 TFF3Q07654 80 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 RPL39P5Q59GN2 51 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 UQCC3Q6UW78 93 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 R3HDM4Q96D70 268 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 C19orf12Q9NSK7 152 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 HSPB7Q9UBY9 170 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 TANC2Q9HCD6 1990 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 MARCH11A6NNE9 402 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 PROP1O75360 226 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 IAPPP10997 89 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 LOXP28300 417 aaPredicted RBP14.35□□□□□ -0.11
VRK1-201ENST00000216639 THBS3P49746 956 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 RAB5CP51148 216 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 ERVK-16P61578 105 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 MRPS11P82912 194 aaKnown RBP14.35□□□□□ -0.11
VRK1-201ENST00000216639 MIDNQ504T8 468 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 C4orf17Q53FE4 359 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 PRAMEF5Q5TYX0 476 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 LYG1Q8N1E2 194 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 TMEM217Q8N7C4 229 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 HSD17B11Q8NBQ5 300 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 ZNF439Q8NDP4 499 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 H1FXQ92522 213 aaKnown RBP14.35□□□□□ -0.11
VRK1-201ENST00000216639 LEAP2Q969E1 77 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 ATP5SQ99766 215 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 MMP26Q9NRE1 261 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 ARID1AO14497 2285 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 ICE1Q9Y2F5 2266 aa14.35□□□□□ -0.11
VRK1-201ENST00000216639 FAM90A9PA6NNJ1 464 aa14.34□□□□□ -0.11
VRK1-201ENST00000216639 SHOXO15266 292 aa14.34□□□□□ -0.11
VRK1-201ENST00000216639 RBMXL2O75526 392 aaKnown RBP14.34□□□□□ -0.11
VRK1-201ENST00000216639 IL34Q6ZMJ4 242 aa14.34□□□□□ -0.11
VRK1-201ENST00000216639 OR4S2Q8NH73 311 aa14.34□□□□□ -0.11
VRK1-201ENST00000216639 PARP11Q9NR21 331 aa14.34□□□□□ -0.11
VRK1-201ENST00000216639 SPTBN4Q9H254 2564 aa14.34□□□□□ -0.11
VRK1-201ENST00000216639 SAA2-SAA4A0A096LPE2 208 aa14.33□□□□□ -0.12
VRK1-201ENST00000216639 A0A1W2PPE3 182 aa14.33□□□□□ -0.12
VRK1-201ENST00000216639 H3BP45 60 aa14.33□□□□□ -0.12
VRK1-201ENST00000216639 DVL1O14640 695 aa14.33□□□□□ -0.12
VRK1-201ENST00000216639 FSTL3O95633 263 aa14.33□□□□□ -0.12
VRK1-201ENST00000216639 SAA2P0DJI9 122 aaPredicted RBP14.33□□□□□ -0.12
VRK1-201ENST00000216639 GNG10P50151 68 aa14.33□□□□□ -0.12
VRK1-201ENST00000216639 HBG1P69891 147 aa14.33□□□□□ -0.12
VRK1-201ENST00000216639 HBG2P69892 147 aa14.33□□□□□ -0.12
VRK1-201ENST00000216639 ZNF273Q14593 569 aa14.33□□□□□ -0.12
VRK1-201ENST00000216639 PXDC1Q5TGL8 231 aa14.33□□□□□ -0.12
VRK1-201ENST00000216639 LYPD2Q6UXB3 125 aa14.33□□□□□ -0.12
VRK1-201ENST00000216639 HEPN1Q6WQI6 88 aa14.33□□□□□ -0.12
VRK1-201ENST00000216639 ODF3L1Q8IXM7 274 aa14.33□□□□□ -0.12
VRK1-201ENST00000216639 GNPNAT1Q96EK6 184 aaPredicted RBP14.33□□□□□ -0.12
VRK1-201ENST00000216639 RAB1BQ9H0U4 201 aa14.33□□□□□ -0.12
VRK1-201ENST00000216639 RBKSQ9H477 322 aa14.33□□□□□ -0.12
VRK1-201ENST00000216639 CACFD1Q9UGQ2 172 aa14.33□□□□□ -0.12
VRK1-201ENST00000216639 DSCAML1Q8TD84 2053 aa14.33□□□□□ -0.12
VRK1-201ENST00000216639 NQO2P16083 231 aa14.32□□□□□ -0.12
VRK1-201ENST00000216639 LINC00205P59089 165 aa14.32□□□□□ -0.12
VRK1-201ENST00000216639 TMEM200BQ69YZ2 307 aa14.32□□□□□ -0.12
VRK1-201ENST00000216639 SLC25A48Q6ZT89 311 aaKnown RBP14.32□□□□□ -0.12
VRK1-201ENST00000216639 ZNF295-AS1Q8N0V1 137 aa14.32□□□□□ -0.12
VRK1-201ENST00000216639 CIB3Q96Q77 187 aaPredicted RBP14.32□□□□□ -0.12
VRK1-201ENST00000216639 STRAPQ9Y3F4 350 aaKnown RBP14.32□□□□□ -0.12
VRK1-201ENST00000216639 MED19A0JLT2 244 aaPredicted RBP14.32□□□□□ -0.12
VRK1-201ENST00000216639 MMP23AO75900 390 aa14.32□□□□□ -0.12
VRK1-201ENST00000216639 LY86O95711 162 aa14.32□□□□□ -0.12
VRK1-201ENST00000216639 IFNA5P01569 189 aa14.32□□□□□ -0.12
VRK1-201ENST00000216639 DANCRP0C864 163 aa14.32□□□□□ -0.12
VRK1-201ENST00000216639 AGAP20933 346 aa14.32□□□□□ -0.12
VRK1-201ENST00000216639 F2RL1P55085 397 aa14.32□□□□□ -0.12
VRK1-201ENST00000216639 TMEM267Q0VDI3 215 aaPredicted RBP14.32□□□□□ -0.12
VRK1-201ENST00000216639 Q6ZRG5 221 aa14.32□□□□□ -0.12
VRK1-201ENST00000216639 DDB2Q92466 427 aa14.32□□□□□ -0.12
VRK1-201ENST00000216639 LINC00052Q96N35 136 aa14.32□□□□□ -0.12
VRK1-201ENST00000216639 HRH4Q9H3N8 390 aa14.32□□□□□ -0.12
VRK1-201ENST00000216639 CBLN4Q9NTU7 201 aa14.32□□□□□ -0.12
VRK1-201ENST00000216639 CTSZQ9UBR2 303 aa14.32□□□□□ -0.12
VRK1-201ENST00000216639 ZG16O60844 167 aa14.31□□□□□ -0.12
VRK1-201ENST00000216639 PRH1P02810 166 aa14.31□□□□□ -0.12
VRK1-201ENST00000216639 SPANXN5Q5MJ07 72 aa14.31□□□□□ -0.12
VRK1-201ENST00000216639 SLC25A24Q6NUK1 477 aa14.31□□□□□ -0.12
VRK1-201ENST00000216639 STPG2Q8N412 459 aa14.31□□□□□ -0.12
VRK1-201ENST00000216639 TSNAXQ99598 290 aaKnown RBP14.31□□□□□ -0.12
VRK1-201ENST00000216639 TRBV23-1A0A0A0MS06 115 aa14.3□□□□□ -0.12
VRK1-201ENST00000216639 UMAD1C9J7I0 102 aa14.3□□□□□ -0.12
VRK1-201ENST00000216639 TRIM77I1YAP6 450 aa14.3□□□□□ -0.12
VRK1-201ENST00000216639 METTL15P1P0C7V9 234 aa14.3□□□□□ -0.12
VRK1-201ENST00000216639 ATP6V0CP27449 155 aa14.3□□□□□ -0.12
VRK1-201ENST00000216639 CAMLGP49069 296 aa14.3□□□□□ -0.12
VRK1-201ENST00000216639 PJVKQ0ZLH3 352 aa14.3□□□□□ -0.12
VRK1-201ENST00000216639 UTF1Q5T230 341 aa14.3□□□□□ -0.12
VRK1-201ENST00000216639 OR2G3Q8NGZ4 309 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms