RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Q6DIA7 600 aa17.89■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Olfr822Q8VFU1 312 aa17.89■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Cep41Q99NF3 373 aa17.89■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Mrps36Q9CQX8 102 aa17.89■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Vmn1r44Q9EQ47 310 aa17.89■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 1700031F05RikB1AX30 191 aa17.89■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Gm4950D3YUM8 205 aa17.89■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Olfr69E9Q7C5 316 aa17.89■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Tspan5P62080 268 aa17.89■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Gm10645Q3UPY1 145 aa17.89■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 N6amt1Q6SKR2 214 aa17.89■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Tas2r116Q7M713 305 aa17.89■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Olfr180Q7TS48 317 aa17.89■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Bricd5Q8BV89 174 aa17.89■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Olfr790Q8VGJ3 322 aa17.89■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Tprg1lQ9DBS2 266 aa17.89■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Sp6Q9ESX2 376 aa17.89■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Dbx2F8VQH7 377 aa17.88■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 PspnO70300 156 aa17.88■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 P01660 111 aa17.88■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Gm5127Q3UQH6 212 aa17.88■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Gm10192Q3V0S1 108 aa17.88■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Rhbdd1Q8BHC7 315 aa17.88■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Lrrtm1Q8K377 522 aa17.88■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Cuedc1Q8R3V6 388 aa17.88■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 DapQ91XC8 102 aa17.88■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Dnajb11Q99KV1 358 aa17.88■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Il36bQ9D6Z6 183 aa17.88■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Gpx8Q9D7B7 209 aa17.88■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Ntn3Q9R1A3 580 aa17.88■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Hcfc1Q61191 2045 aaKnown RBP17.88■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Ighv1-13A0A075B5I0 98 aa17.87■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Ankdd1aA0A1L1ST07 508 aa17.87■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Amy2a1E9PV85 245 aa17.87■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Olfr568E9Q554 313 aa17.87■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Gm21818J3KMS6 170 aa17.87■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Slc18a3O35304 530 aa17.87■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 CtsbP10605 339 aa17.87■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Nkpd1Q0VF94 599 aa17.87■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Dtx1Q61010 627 aa17.87■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Clns1aQ61189 236 aa17.87■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Sat2Q6P8J2 170 aa17.87■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Hide1Q75VT8 222 aa17.87■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 PirtQ8BFY0 135 aa17.87■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Acsm5Q8BGA8 578 aa17.87■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Actrt3Q8BXF8 369 aa17.87■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Esco2Q8CIB9 592 aaKnown RBP17.87■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Vmn1r237Q8R296 289 aa17.87■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 MavsQ8VCF0 503 aa17.87■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Rbm39Q8VH51 530 aaKnown RBP17.87■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Slc25a22Q9D6M3 323 aa17.87■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Hils1Q9QYL0 170 aa17.87■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 SrpxQ9R0M3 464 aa17.87■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Mast4Q811L6 2618 aa17.87■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Muc2Q80Z19 2680 aa17.87■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Olfr175-ps1A0A140T8K4 308 aa17.86■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Obp1bA2AEP0 171 aa17.86■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Birc7A2AWP0 285 aa17.86■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Gm14743A2BHD2 171 aa17.86■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Nxpe5E0CX47 564 aa17.86■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Adgrg5Q3V3Z3 524 aa17.86■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Glra1Q64018 457 aa17.86■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Olfr775Q7TRI4 312 aa17.86■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Tssk5Q8C1R0 372 aa17.86■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Scgb2b26Q8JZX1 112 aa17.86■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Tmed4Q8R1V4 227 aa17.86■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Slc17a9Q8VCL5 447 aa17.86■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Memo1Q91VH6 297 aa17.86■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Znf281Q99LI5 893 aa17.86■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Ceacam18Q9D871 376 aa17.86■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Xcr1Q9R0M1 322 aa17.86■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Olfr122W4VSP0 330 aa17.86■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Tep1P97499 2629 aa17.86■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Galr1P56479 348 aa17.86■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Defb20Q30KP3 96 aa17.86■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Zic3Q62521 466 aa17.86■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Tfap2eQ6VUP9 442 aa17.86■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Osbpl11Q8CI95 751 aa17.86■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Snapc5Q8R2K7 98 aa17.86■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Olfr992Q8VGC6 309 aa17.86■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Wdr13Q91V09 485 aa17.86■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 2610524H06RikQ9CZU9 139 aa17.86■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Naa10Q9QY36 235 aa17.86■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Abca12E9Q876 2595 aa17.85■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Olfr418A0A140T8J6 310 aa17.85■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Gm6890A2BG94 208 aa17.85■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Vmn1r129E9QA94 307 aa17.85■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Cldn20G5E8X0 219 aa17.85■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Gm21767J3QPV5 180 aa17.85■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Gm8720K9J7F4 307 aa17.85■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Asgr2P24721 301 aa17.85■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Fabp2P55050 132 aa17.85■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Aqp2P56402 271 aa17.85■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Tamm41Q3TUH1 337 aa17.85■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Gnb3Q61011 340 aa17.85■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Cmtm3Q99LJ5 184 aa17.85■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 SclyQ9JLI6 432 aa17.85■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Syt7Q9R0N7 403 aa17.85■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Sptan1P16546 2472 aaKnown RBP17.85■□□□□ 0.45
Ccdc88a-202ENSMUST00000109477 Gm36368A0A1D5RLK8 91 aa17.84■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 35.2 ms