RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Olig3Q6PFG8 273 aa9.31□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Gm13757Q7TR17 305 aa9.31□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Pld4Q8BG07 503 aa9.31□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Gm16519F8VQK7 162 aa9.31□□□□□ -0.92
Scn8a-201ENSMUST00000082209 H2al1oL7MU04 110 aa9.31□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Rpl29P47915 160 aaKnown RBP9.31□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Neil2Q6R2P8 329 aa9.31□□□□□ -0.92
Scn8a-201ENSMUST00000082209 LssQ8BLN5 733 aa9.31□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Olfr50Q8VGK5 312 aa9.31□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Olfr181Q8VGQ7 317 aa9.31□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Ms4a6bQ99N09 244 aa9.31□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Wwtr1Q9EPK5 395 aa9.31□□□□□ -0.92
Scn8a-201ENSMUST00000082209 RangrfQ9JIB0 185 aa9.31□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Vax2Q9WTP9 292 aa9.31□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Pard6aQ9Z101 346 aa9.31□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Olfr750E9Q0Z1 331 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Meox2P32443 303 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 F2rl1P55086 399 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Olfr507Q8VG13 316 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Prss42Q8VIF2 335 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Tanc1Q0VGY8 1856 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Gm10666K7N6B8 321 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Cnr1P47746 473 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 CtrcQ3SYP2 268 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Prss38Q3UKY7 322 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 BtlaQ7TSA3 306 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Prr11Q8BHE0 368 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Hist1h1aP43275 213 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Tmem108Q8BHE4 574 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Iqcf5Q9DAL7 148 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Gm10358A0A1D5RLD8 333 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 GapdhP16858 333 aaKnown RBP9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Hmx3P42581 356 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Zfp729bQ80VN4 1045 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Scrt2Q8BTH6 311 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Gm3839S4R1W1 333 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Olfr1097A2AVA9 315 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Prrt2E9PUL5 346 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Kcnab1P63143 401 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Gcnt2P97402 401 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Znf784Q8BI69 297 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Olfr1138Q8VFQ9 311 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Map1lc3bQ9CQV6 125 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Mrpl13Q9D1P0 178 aaKnown RBP9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Cldn15Q9Z0S5 227 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Olfr1289A0A288CFY5 326 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Olfr1116E9PXB8 307 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 2010315B03RikJ3QK55 433 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 S100a8P27005 89 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Rnf133Q14B02 382 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Fbxo4Q8CHQ0 385 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Ube2fQ9CY34 185 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Cml3Q9JIY8 226 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Skp2Q9Z0Z3 424 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Ccl27Q9Z1X0 120 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Foxq1O70220 400 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 C1rlQ3UZ09 482 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Slc24a5Q8C261 501 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Gm11541Q8C4D8 108 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Stxbp6Q8R3T5 210 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Socs6Q9JLY0 533 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Cldn34c2J3QNM1 233 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 FahP35505 419 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Serf2P84102 59 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Cldn34c1Q8K193 234 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Eva1aQ91WM6 156 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Stard4Q99JV5 224 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 HgfacQ9R098 653 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 RrhO35214 337 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Olfr1042Q7TR81 313 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Cthrc1Q9D1D6 245 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Ttc9bQ9D6E4 239 aa9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Actl6aQ9Z2N8 429 aaKnown RBP9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Urb1Q571H0 2274 aaKnown RBP9.3□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Ogg1O08760 345 aa9.29□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Gm14851Q5ERJ0 116 aa9.29□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Usf1Q61069 310 aa9.29□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Hand1Q64279 216 aa9.29□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Cdhr3Q8BL00 831 aa9.29□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Olfr60Q8VGL4 311 aa9.29□□□□□ -0.92
Scn8a-201ENSMUST00000082209 PtprdQ64487 1912 aa9.29□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Vma21-psA0A140T8R2 101 aa9.29□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Birc7A2AWP0 285 aa9.29□□□□□ -0.92
Scn8a-201ENSMUST00000082209 MepeQ8K4L6 441 aa9.29□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Pitpnc1Q8K4R4 332 aa9.29□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Wfikkn1Q8R0S6 552 aa9.29□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Gins3Q9CY94 216 aa9.29□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Thsd4Q3UTY6 1018 aa9.29□□□□□ -0.92
Scn8a-201ENSMUST00000082209 C130079G13RikQ8BUY2 280 aa9.29□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Xkr8Q8C0T0 401 aa9.29□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Ctnnbip1Q9JJN6 81 aa9.29□□□□□ -0.92
Scn8a-201ENSMUST00000082209 PrnA0A075B668 197 aa9.29□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Gm20918J3QN17 227 aa9.29□□□□□ -0.92
Scn8a-201ENSMUST00000082209 P01679 107 aa9.29□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Lyz1P17897 148 aa9.29□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Egfbp2P36368 261 aa9.29□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Sec14l3Q5SQ27 401 aa9.29□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Nit1Q8VDK1 323 aa9.29□□□□□ -0.92
Scn8a-201ENSMUST00000082209 Olfr362Q8VGV7 317 aa9.29□□□□□ -0.92
Scn8a-201ENSMUST00000082209 PrndQ9QUG3 179 aa9.29□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 33 ms