RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Ighv5-12A0A075B5Q4 117 aa16.15■□□□□ 0.18
Scaf11-201ENSMUST00000047835 Gm21970F6XX07 295 aa16.15■□□□□ 0.18
Scaf11-201ENSMUST00000047835 Fndc4Q3TR08 231 aa16.15■□□□□ 0.18
Scaf11-201ENSMUST00000047835 Klhdc2Q4G5Y1 406 aa16.15■□□□□ 0.18
Scaf11-201ENSMUST00000047835 Gins1Q9CZ15 196 aa16.15■□□□□ 0.18
Scaf11-201ENSMUST00000047835 Tmem128Q9CZB9 163 aa16.15■□□□□ 0.18
Scaf11-201ENSMUST00000047835 Lmx1bO88609 395 aa16.14■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Hoxb2P0C1T1 354 aa16.14■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Hoxd9P28357 339 aa16.14■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Thsd4Q3UTY6 1018 aa16.14■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Harbi1Q8BR93 349 aa16.14■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Scgb3a2Q920H1 91 aa16.14■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Ndufa6Q9CQZ5 131 aaKnown RBP16.14■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Utp23Q9CX11 249 aaKnown RBP16.14■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Mef2bO55087 349 aa16.14■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Hoxa1P09022 331 aa16.14■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Crybb2P62696 205 aa16.14■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Olfr452Q7TRV8 317 aa16.14■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Nmes1Q810Q5 83 aa16.14■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Olfr794Q8VF26 320 aa16.14■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Olfr38Q8VGP4 317 aa16.14■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Ms4a4cQ9D3F6 226 aa16.14■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Ube2l6Q9QZU9 153 aa16.14■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Gm38303A0A0A6YWW8 100 aa16.14■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Kcnk15B2RVL1 343 aa16.14■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Olfr746E9Q840 314 aa16.14■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Rps2P25444 293 aaKnown RBP16.14■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Olfr93Q6UAH1 312 aa16.14■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Znf503Q7TMA2 652 aa16.14■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Bola1Q9D8S9 137 aaKnown RBP16.14■□□□□ 0.17
Scaf11-201ENSMUST00000047835 HikeshiQ9DD02 197 aa16.14■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Paqr4Q9JJE4 273 aa16.14■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Gm21834J3QN05 151 aa16.14■□□□□ 0.17
Scaf11-201ENSMUST00000047835 EcscrQ3TZW0 214 aa16.14■□□□□ 0.17
Scaf11-201ENSMUST00000047835 VwceQ3U515 929 aa16.14■□□□□ 0.17
Scaf11-201ENSMUST00000047835 9930021J03RikH3BKP8 2027 aa16.13■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Gm29776A0A286YEC0 699 aa16.13■□□□□ 0.17
Scaf11-201ENSMUST00000047835 AgmatA2AS89 358 aa16.13■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Gm8677K9J7G9 307 aa16.13■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Ndufb6Q3UIU2 128 aa16.13■□□□□ 0.17
Scaf11-201ENSMUST00000047835 GmppaQ922H4 420 aa16.13■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Olfr1335B2RVY8 335 aa16.13■□□□□ 0.17
Scaf11-201ENSMUST00000047835 ArsgQ3TYD4 525 aa16.13■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Klk13Q8CGR6 276 aa16.13■□□□□ 0.17
Scaf11-201ENSMUST00000047835 VirmaA2AIV2 1811 aaKnown RBP16.13■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Ca6P18761 317 aa16.13■□□□□ 0.17
Scaf11-201ENSMUST00000047835 DbpQ60925 325 aa16.13■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Olfr1226Q8VGM5 310 aa16.13■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Scp2d1Q9DAH1 156 aa16.13■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Wdr25E9Q349 535 aa16.13■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Psg20E9Q9B4 475 aa16.13■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Nudt16l1Q8VHN8 211 aaKnown RBP16.13■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Rep15Q9D7T1 230 aa16.13■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Gm42420A0A0J9YUQ2 99 aa16.13■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Ccl7Q03366 97 aa16.13■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Tppp2Q0P5Y3 170 aa16.13■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Klk8Q61955 260 aa16.13■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Olfr1229Q7TQZ9 311 aa16.13■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Q9CQM1 111 aa16.13■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Q9DAE8 263 aa16.13■□□□□ 0.17
Scaf11-201ENSMUST00000047835 AanatO88816 205 aa16.12■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Lrfn3Q8BLY3 626 aa16.12■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Dok5Q91ZM9 306 aa16.12■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Brca1P48754 1812 aa16.12■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Ighv4-1A0A075B5R5 116 aa16.12■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Gm5901D3YVJ1 333 aa16.12■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Olfr544E9PX47 334 aa16.12■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Zfp707F6QUN2 391 aa16.12■□□□□ 0.17
Scaf11-201ENSMUST00000047835 H2-M10.1O19443 331 aa16.12■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Tcl1b1P56840 116 aa16.12■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Gm21943Q5FWD5 227 aa16.12■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Slc46a1Q6PEM8 459 aa16.12■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Gm9881Q8BR56 211 aa16.12■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Pla2g16Q8R3U1 162 aa16.12■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Exosc2Q8VBV3 293 aaKnown RBP16.12■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Naa60Q9DBU2 242 aa16.12■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Frem3Q5H8B9 2123 aa16.12■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Vmn1r5B2RQT2 315 aa16.12■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Fut1O09160 376 aa16.12■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Kcnj3P63250 501 aa16.12■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Mtch2Q791V5 303 aa16.12■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Scrt2Q8BTH6 311 aa16.12■□□□□ 0.17
Scaf11-201ENSMUST00000047835 RhebQ921J2 184 aa16.12■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Gng10Q9CXP8 68 aa16.12■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Tnfrsf19Q9JLL3 416 aa16.12■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Prr32A2AFE9 284 aa16.11■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Olfr1029A2ATE0 324 aa16.11■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Adam10O35598 749 aa16.11■□□□□ 0.17
Scaf11-201ENSMUST00000047835 HrasQ61411 189 aa16.11■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Olfr1028Q7TR89 324 aa16.11■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Olfr1368Q8VFG3 314 aa16.11■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Rab9aQ9R0M6 201 aa16.11■□□□□ 0.17
Scaf11-201ENSMUST00000047835 P01915 264 aa16.11■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Rasl12Q08AT1 266 aa16.11■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Lax1Q8BHB3 407 aa16.11■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Tmprss3Q8K1T0 453 aa16.11■□□□□ 0.17
Scaf11-201ENSMUST00000047835 B3galnt1Q920V1 331 aa16.11■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Sval1Q9D2X6 151 aa16.11■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Shisa5Q9D7I0 235 aa16.11■□□□□ 0.17
Scaf11-201ENSMUST00000047835 Pusl1A2ADA5 291 aa16.11■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms