RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Cd55bQ61476 407 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr1357Q7TQU7 313 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr901Q7TRD1 311 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Mob3aQ8BSU7 217 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 DapQ91XC8 102 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Rcc1lQ9CYF5 461 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Mettl9Q9EPL4 318 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Tnfrsf19Q9JLL3 416 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 A0A286YCQ8 80 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Gm21746J3QMM6 180 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Pde6dO55057 150 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Wnt1P04426 370 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Rag2P21784 527 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Defb46Q4QY34 57 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Rnf150Q5DTZ6 437 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Hes7Q8BKT2 225 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Vmn1r237Q8R296 289 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr493Q8VEW5 314 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr1239Q8VGM8 305 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Cysltr2Q920A1 309 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 1700034E13RikQ9D2T6 108 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Cxcr6Q9EQ16 351 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Igkv1-135A0A0B4J1H7 120 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Prss47A0A0N4SVQ0 395 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Zdhhc22A0PK84 263 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Ascl4M0QW46 144 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Ifna5P07349 189 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 ApelaP0DMC4 54 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Il9P15247 144 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Icam2P35330 277 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Shc1P98083 579 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Trav5d-4Q5R1F6 114 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Atpaf1Q811I0 324 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Hcfc1r1Q9CYQ5 120 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Rbfox1Q9JJ43 396 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Il17bQ9QXT6 180 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 R3hdmlA2A5I3 253 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr555E9Q547 315 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Vmn1r114L7N226 321 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Vmn1r126L7N2C8 321 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Rasl12Q08AT1 266 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Phf13Q8K2W6 296 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Vmn1r26Q8R2D7 339 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Pnpla3Q91WW7 413 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Tmem33Q9CR67 247 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Gm42420A0A0J9YUQ2 99 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr554E9Q546 317 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Hoxb1P17919 297 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Nhlh1Q02576 133 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 StradbQ8K4T3 418 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Vmn1r233Q8R294 319 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Myct1Q8R411 188 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Rab32Q9CZE3 223 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Wdr20Q9D5R2 567 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Paqr4Q9JJE4 273 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Fbp1Q9QXD6 338 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr157Q9QZ20 318 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 C3ar1O09047 477 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Fpr2O88536 351 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Dnase1P49183 284 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Patz1Q5NBY9 687 aaKnown RBP9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Defb21Q8C5Z4 100 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 ApooQ9DCZ4 198 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Suv39h2Q9EQQ0 477 aa9.05□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Tdrd6P61407 2134 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Gm29049A0A087WSM5 227 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr1248A0A1L1SSZ5 307 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Aadacl3A2A7Z8 408 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Gm21118J3QPK8 227 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Rps2P25444 293 aaKnown RBP9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 InmtP40936 264 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Ctsll3Q3ULP7 331 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Gm20909Q5FWB5 227 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Gm20852Q5M8R5 227 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Gm20917Q62457 227 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Gm20809Q62458 227 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Gm20865Q62460 227 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Gm20738Q810R8 227 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Tacstd2Q8BGV3 317 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Degs2Q8R2F2 323 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Sft2d2Q8VD57 159 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr1450Q8VF19 325 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Wdr13Q91V09 485 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Rgs19Q9CX84 216 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Gm20806Q9D9T3 227 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Sema7aQ9QUR8 664 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 LctF8VPT3 1931 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Gm5239D3YYZ2 122 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 NgpO08692 167 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 VhlP40338 181 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Cd7P50283 210 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Mpzl1Q3TEW6 270 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Clpsl2Q3UW21 102 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 BC100530Q497J0 97 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 HrasQ61411 189 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Znf2Q8BIQ3 427 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Vmn1r178Q8R2B6 304 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr1079Q8VF52 315 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr494Q8VG07 314 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Bola1Q9D8S9 137 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 80 ms