RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Crispld2Q8BZQ2 495 aa9.92□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Slc24a4Q8CGQ8 622 aa9.92□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Edem1Q925U4 652 aa9.92□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Cela3bQ9CQ52 269 aa9.92□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Gje1Q9CX92 205 aa9.92□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Gm10428J3QNV7 132 aa9.92□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Lhx4P53776 390 aa9.92□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Gm525Q3V3I5 90 aa9.92□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Rnase11Q5GAM9 192 aa9.92□□□□□ -0.82
Topbp1-201ENSMUST00000035164 B3gnt9Q8VI16 399 aa9.92□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Rab27bQ99P58 218 aa9.92□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Chst1Q9EQC0 411 aa9.92□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Fbxw4Q9JMJ2 410 aa9.92□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Kcnip3Q9QXT8 256 aa9.92□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Olfr785A0A0N4SVC3 312 aa9.92□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Olfr789A0A1L1SV77 312 aa9.92□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Ccl4P14097 92 aa9.92□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Fbll1Q80WS3 314 aaKnown RBP9.92□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Rnf144bQ8BKD6 301 aa9.92□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Plcxd1Q8CHS4 345 aa9.92□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Neurl3Q8CJC5 254 aa9.92□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Rdh9Q8K5C8 317 aa9.92□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Olfr916Q8VG53 310 aa9.92□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Olfr1201Q8VGF5 307 aa9.92□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Tbx19Q99ME7 446 aa9.92□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Sgms2Q9D4B1 365 aa9.92□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Zfp825A0A1Y7VK00 292 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Olfr555E9Q547 315 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Srsf5O35326 269 aaKnown RBP9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 P01634 136 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Egr3P43300 387 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 RidaP52760 135 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Q504N7 393 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Patz1Q5NBY9 687 aaKnown RBP9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Vmn1r178Q8R2B6 304 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Olfr1377Q8VGH1 307 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Plekha3Q9ERS4 297 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Hsf4Q9R0L1 492 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Zfp867E9Q2M4 473 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Tcstv1O70619 171 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Tgfbr3O88393 850 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Cdx1P18111 268 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 B3gat2P59270 324 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Gm10644Q3TZG3 87 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Grb2Q60631 217 aaKnown RBP9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Spock1Q62288 442 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Vmn1r183Q8K3N5 305 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Eva1aQ91WM6 156 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Tstd3Q9D0B5 157 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Atg101Q9D8Z6 218 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Trav5-4A0A075B652 114 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Olfr905L7N1X5 310 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Igsf11P0C673 428 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Defa-rs1P17533 116 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Rph3alQ768S4 302 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Hdhd3Q9CYW4 251 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Sdf2l1Q9ESP1 221 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Gm14288E9Q9W0 88 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 NrasP08556 189 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Mfap2P55002 183 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Osgin2Q3TEE9 550 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Trp53rkaQ5U452 244 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Olfr1026Q7TR90 307 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Olfr593Q8VF28 327 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Olfr114Q923Q8 312 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Glrx2Q923X4 156 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Tp53rkQ99PW4 244 aa9.91□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Zfp942B8JJA7 486 aa9.9□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Gm20939L7N243 523 aa9.9□□□□□ -0.82
Topbp1-201ENSMUST00000035164 VwceQ3U515 929 aa9.9□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Vash1Q8C1W1 375 aa9.9□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Ly6g6eQ8K1T6 166 aa9.9□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Olfr102B2RT33 308 aa9.9□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Fa2hQ5MPP0 372 aa9.9□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Zfp948Q6DFU8 667 aa9.9□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Zfp954Q7TNU5 416 aa9.9□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Scrt2Q8BTH6 311 aa9.9□□□□□ -0.82
Topbp1-201ENSMUST00000035164 LiphQ8CIV3 451 aa9.9□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Scgb2b26Q8JZX1 112 aa9.9□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Adipor1Q91VH1 375 aa9.9□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Vgll1Q99NC0 307 aa9.9□□□□□ -0.82
Topbp1-201ENSMUST00000035164 PacrgQ9DAK2 241 aa9.9□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Tln2Q71LX4 2375 aa9.9□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Usf3B2RUQ2 2221 aa9.9□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Kcnk15B2RVL1 343 aa9.9□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Sh2b3O09039 548 aa9.9□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Fcgr1P26151 404 aa9.9□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Tnfsf10P50592 291 aa9.9□□□□□ -0.82
Topbp1-201ENSMUST00000035164 NptnP97300 397 aa9.9□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Gm5127Q3UQH6 212 aa9.9□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Pgam5Q8BX10 288 aa9.9□□□□□ -0.82
Topbp1-201ENSMUST00000035164 RydenQ8CAK3 290 aaKnown RBP9.9□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Olfr1427Q8VFU9 311 aa9.9□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Mob1aQ921Y0 216 aa9.9□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Rgs11Q9Z2H1 443 aa9.9□□□□□ -0.82
Topbp1-201ENSMUST00000035164 Dhrs3O88876 302 aa9.9□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Gabra6P16305 453 aa9.9□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Mcpt8P43430 247 aa9.9□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Gm10912Q3UXH0 145 aa9.9□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Ip6k3Q8BWD2 396 aa9.9□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 40.9 ms