RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Alkbh4Q9D8F1 300 aa14.2□□□□□ -0.14
Shh-201ENSMUST00000002708 Phf7Q9DAG9 307 aa14.2□□□□□ -0.14
Shh-201ENSMUST00000002708 Pmaip1Q9JM54 103 aa14.2□□□□□ -0.14
Shh-201ENSMUST00000002708 Trav15d-1-dv6d-1A0A075B624 124 aa14.2□□□□□ -0.14
Shh-201ENSMUST00000002708 MiipA2A7Y5 387 aa14.2□□□□□ -0.14
Shh-201ENSMUST00000002708 P01680 129 aa14.2□□□□□ -0.14
Shh-201ENSMUST00000002708 Zfp36P22893 319 aaKnown RBP14.2□□□□□ -0.14
Shh-201ENSMUST00000002708 Snapc5Q8R2K7 98 aa14.2□□□□□ -0.14
Shh-201ENSMUST00000002708 Rab5aQ9CQD1 215 aa14.2□□□□□ -0.14
Shh-201ENSMUST00000002708 Zfpl1Q9DB43 310 aa14.2□□□□□ -0.14
Shh-201ENSMUST00000002708 Naa60Q9DBU2 242 aa14.2□□□□□ -0.14
Shh-201ENSMUST00000002708 Mmp24Q9R0S2 618 aa14.2□□□□□ -0.14
Shh-201ENSMUST00000002708 Gm5039J3QNT6 144 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr1564K7N6V7 318 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Wipf3P0C7L0 485 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 CluQ06890 448 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Bcl2l15Q08ED0 167 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Gm2016Q3TQZ4 144 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 UevldQ3U1V6 471 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Cln5Q3UMW8 341 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr1026Q7TR90 307 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Gm5662Q8BX20 144 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 YbeyQ8CAV0 164 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Sulf2Q8CFG0 875 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr1368Q8VFG3 314 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Neurl1Q923S6 574 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 ManbalQ9D8X0 85 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Ntn3Q9R1A3 580 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 NpffQ9WVA8 114 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Eml6Q5SQM0 1958 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr1490A0A1L1SVH0 321 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr1029A2ATE0 324 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 A630095N17RikJ3KMM7 116 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 NdnP25233 325 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Vmn1r181Q0P547 304 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr1340Q3KPC7 315 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Gm6899Q3USS0 134 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Arg1Q61176 323 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr1028Q7TR89 324 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Dcaf12Q8BGZ3 453 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Mbnl3Q8R003 342 aaKnown RBP14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Q8VE95 218 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr129Q8VEY1 330 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr639Q8VGY8 316 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr638Q8VH20 321 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Fbp1Q9QXD6 338 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr157Q9QZ20 318 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Mecp2Q9Z2D6 484 aaKnown RBP14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Ccdc188F6WEU2 249 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Gm10097J3KMK7 105 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 EndogO08600 294 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Gstp2P46425 210 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Defa11P50709 85 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Slc35e3Q6PGC7 313 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Ell3Q80VR2 395 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Zdhhc25Q810M4 279 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Gm9837Q8C607 126 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr860Q8VFF7 317 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr1240Q8VG73 314 aa14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Mrpl13Q9D1P0 178 aaKnown RBP14.19□□□□□ -0.14
Shh-201ENSMUST00000002708 Ube2dnl1A2AFH1 155 aa14.18□□□□□ -0.14
Shh-201ENSMUST00000002708 Scgb1b29D2XZ31 93 aa14.18□□□□□ -0.14
Shh-201ENSMUST00000002708 Scgb1b20E9PWZ2 93 aa14.18□□□□□ -0.14
Shh-201ENSMUST00000002708 Gm21972J3QN38 98 aa14.18□□□□□ -0.14
Shh-201ENSMUST00000002708 Hmgb3O54879 200 aaKnown RBP14.18□□□□□ -0.14
Shh-201ENSMUST00000002708 Klk1b1P00755 261 aa14.18□□□□□ -0.14
Shh-201ENSMUST00000002708 PcolceQ61398 468 aa14.18□□□□□ -0.14
Shh-201ENSMUST00000002708 Gm21093Q6GQS8 569 aa14.18□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr1341Q7TQV4 312 aa14.18□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr452Q7TRV8 317 aa14.18□□□□□ -0.14
Shh-201ENSMUST00000002708 Lrtm1Q8BXQ3 356 aa14.18□□□□□ -0.14
Shh-201ENSMUST00000002708 Acer2Q8VD53 275 aa14.18□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr38Q8VGP4 317 aa14.18□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr587-ps1A0A1B0GSS1 159 aa14.18□□□□□ -0.14
Shh-201ENSMUST00000002708 P10404 641 aa14.18□□□□□ -0.14
Shh-201ENSMUST00000002708 BlkP16277 499 aa14.18□□□□□ -0.14
Shh-201ENSMUST00000002708 Hoxb1P17919 297 aa14.18□□□□□ -0.14
Shh-201ENSMUST00000002708 Rac3P60764 192 aa14.18□□□□□ -0.14
Shh-201ENSMUST00000002708 Polr2gP62488 172 aa14.18□□□□□ -0.14
Shh-201ENSMUST00000002708 Jagn1Q5XKN4 183 aa14.18□□□□□ -0.14
Shh-201ENSMUST00000002708 Fbxo27Q6DIA9 280 aa14.18□□□□□ -0.14
Shh-201ENSMUST00000002708 4922502D21RikQ8C634 189 aa14.18□□□□□ -0.14
Shh-201ENSMUST00000002708 Zfp87Q8K2A4 540 aa14.18□□□□□ -0.14
Shh-201ENSMUST00000002708 Vrk3Q8K3G5 453 aa14.18□□□□□ -0.14
Shh-201ENSMUST00000002708 Rnf151Q9CQ29 239 aa14.18□□□□□ -0.14
Shh-201ENSMUST00000002708 GmfbQ9CQI3 142 aa14.18□□□□□ -0.14
Shh-201ENSMUST00000002708 Rbfox1Q9JJ43 396 aa14.18□□□□□ -0.14
Shh-201ENSMUST00000002708 Tagln2Q9WVA4 199 aaKnown RBP14.18□□□□□ -0.14
Shh-201ENSMUST00000002708 Igkv14-126A0A075B5K0 117 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 Igkv12-89A0A0G2JGW8 112 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr785A0A0N4SVC3 312 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 Gm3573L7N292 184 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 P2ry1P49650 373 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 Crisp3Q03402 241 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr1507Q0VEP0 313 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 Mcrip1Q3UGS4 97 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 Tsr3Q5HZH2 323 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 Kat7Q5SVQ0 613 aaKnown RBP14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr11Q60890 313 aa14.17□□□□□ -0.14
Shh-201ENSMUST00000002708 DhhQ61488 396 aa14.17□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 43.2 ms