RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 TMEM222Q9H0R3 208 aa10.77□□□□□ -0.69
PHGDH-221ENST00000641573 RANBP3Q9H6Z4 567 aaPredicted RBP10.77□□□□□ -0.69
PHGDH-221ENST00000641573 PATZ1Q9HBE1 687 aaKnown RBP10.77□□□□□ -0.69
PHGDH-221ENST00000641573 RPUSD1Q9UJJ7 312 aaKnown RBP10.77□□□□□ -0.69
PHGDH-221ENST00000641573 F5H0A9 414 aaPredicted RBP10.76□□□□□ -0.69
PHGDH-221ENST00000641573 G3V3Q6 166 aa10.76□□□□□ -0.69
PHGDH-221ENST00000641573 SLC31A2O15432 143 aa10.76□□□□□ -0.69
PHGDH-221ENST00000641573 CRLF1O75462 422 aa10.76□□□□□ -0.69
PHGDH-221ENST00000641573 B3GALNT1O75752 331 aa10.76□□□□□ -0.69
PHGDH-221ENST00000641573 IGHV3-7P01780 117 aa10.76□□□□□ -0.69
PHGDH-221ENST00000641573 IGHV4-39P01824 125 aa10.76□□□□□ -0.69
PHGDH-221ENST00000641573 UCP1P25874 307 aa10.76□□□□□ -0.69
PHGDH-221ENST00000641573 GPR12P47775 334 aa10.76□□□□□ -0.69
PHGDH-221ENST00000641573 ZNF134P52741 427 aa10.76□□□□□ -0.69
PHGDH-221ENST00000641573 DLX6P56179 175 aa10.76□□□□□ -0.69
PHGDH-221ENST00000641573 WDR25Q64LD2 544 aaPredicted RBP10.76□□□□□ -0.69
PHGDH-221ENST00000641573 HEPN1Q6WQI6 88 aa10.76□□□□□ -0.69
PHGDH-221ENST00000641573 OR51H1Q8NH63 302 aa10.76□□□□□ -0.69
PHGDH-221ENST00000641573 LHFPL5Q8TAF8 219 aa10.76□□□□□ -0.69
PHGDH-221ENST00000641573 TMEM158Q8WZ71 300 aa10.76□□□□□ -0.69
PHGDH-221ENST00000641573 LEAP2Q969E1 77 aa10.76□□□□□ -0.69
PHGDH-221ENST00000641573 HYLS1Q96M11 299 aa10.76□□□□□ -0.69
PHGDH-221ENST00000641573 TMEM56Q96MV1 263 aa10.76□□□□□ -0.69
PHGDH-221ENST00000641573 AGMATQ9BSE5 352 aa10.76□□□□□ -0.69
PHGDH-221ENST00000641573 NARFLQ9H6Q4 476 aa10.76□□□□□ -0.69
PHGDH-221ENST00000641573 SDHAF2Q9NX18 166 aa10.76□□□□□ -0.69
PHGDH-221ENST00000641573 TMEM56-RWDD3S4R434 201 aa10.76□□□□□ -0.69
PHGDH-221ENST00000641573 KIAA2026Q5HYC2 2103 aa10.76□□□□□ -0.69
PHGDH-221ENST00000641573 IFNA21P01568 189 aa10.75□□□□□ -0.69
PHGDH-221ENST00000641573 ZNF16P17020 682 aaPredicted RBP10.75□□□□□ -0.69
PHGDH-221ENST00000641573 RAB7AP51149 207 aa10.75□□□□□ -0.69
PHGDH-221ENST00000641573 ERVFRD-1P60508 538 aa10.75□□□□□ -0.69
PHGDH-221ENST00000641573 EIF4EBP1Q13541 118 aaPredicted RBP10.75□□□□□ -0.69
PHGDH-221ENST00000641573 CT45A1Q5HYN5 189 aa10.75□□□□□ -0.69
PHGDH-221ENST00000641573 TMEM268Q5VZI3 342 aa10.75□□□□□ -0.69
PHGDH-221ENST00000641573 GGNBP1Q5YKI7 109 aa10.75□□□□□ -0.69
PHGDH-221ENST00000641573 PRSS57Q6UWY2 283 aa10.75□□□□□ -0.69
PHGDH-221ENST00000641573 LYZL2Q7Z4W2 148 aa10.75□□□□□ -0.69
PHGDH-221ENST00000641573 ZNF695Q8IW36 515 aa10.75□□□□□ -0.69
PHGDH-221ENST00000641573 SELENOHQ8IZQ5 122 aaKnown RBP10.75□□□□□ -0.69
PHGDH-221ENST00000641573 ZNF525Q8N782 197 aa10.75□□□□□ -0.69
PHGDH-221ENST00000641573 ZNF439Q8NDP4 499 aa10.75□□□□□ -0.69
PHGDH-221ENST00000641573 OR11H4Q8NGC9 324 aa10.75□□□□□ -0.69
PHGDH-221ENST00000641573 CT45A3Q8NHU0 189 aa10.75□□□□□ -0.69
PHGDH-221ENST00000641573 OR10C1Q96KK4 312 aa10.75□□□□□ -0.69
PHGDH-221ENST00000641573 C2orf50Q96LR7 162 aa10.75□□□□□ -0.69
PHGDH-221ENST00000641573 ABHD14AQ9BUJ0 271 aa10.75□□□□□ -0.69
PHGDH-221ENST00000641573 IFI27L2Q9H2X8 130 aa10.75□□□□□ -0.69
PHGDH-221ENST00000641573 A0A1W2PPE3 182 aa10.74□□□□□ -0.69
PHGDH-221ENST00000641573 MPTX1A8MV57 137 aa10.74□□□□□ -0.69
PHGDH-221ENST00000641573 CDS2O95674 445 aa10.74□□□□□ -0.69
PHGDH-221ENST00000641573 GNG10P50151 68 aa10.74□□□□□ -0.69
PHGDH-221ENST00000641573 PDLIM4P50479 330 aa10.74□□□□□ -0.69
PHGDH-221ENST00000641573 GNB2P62879 340 aa10.74□□□□□ -0.69
PHGDH-221ENST00000641573 CYCSP99999 105 aaKnown RBP10.74□□□□□ -0.69
PHGDH-221ENST00000641573 Q3ZCU0 254 aa10.74□□□□□ -0.69
PHGDH-221ENST00000641573 BTNL3Q6UXE8 466 aa10.74□□□□□ -0.69
PHGDH-221ENST00000641573 ZNF66Q6ZN08 573 aa10.74□□□□□ -0.69
PHGDH-221ENST00000641573 RAB39BQ96DA2 213 aa10.74□□□□□ -0.69
PHGDH-221ENST00000641573 NMES1Q9C002 83 aa10.74□□□□□ -0.69
PHGDH-221ENST00000641573 LIN7CQ9NUP9 197 aaKnown RBP10.74□□□□□ -0.69
PHGDH-221ENST00000641573 COMMD9Q9P000 198 aa10.74□□□□□ -0.69
PHGDH-221ENST00000641573 ARID1AO14497 2285 aa10.74□□□□□ -0.69
PHGDH-221ENST00000641573 TRAV14DV4A0A0A6YYC5 116 aa10.73□□□□□ -0.69
PHGDH-221ENST00000641573 PPIAL4CA0A0B4J2A2 164 aa10.73□□□□□ -0.69
PHGDH-221ENST00000641573 A0A1W2PPH5 198 aa10.73□□□□□ -0.69
PHGDH-221ENST00000641573 C17orf98A8MV24 154 aa10.73□□□□□ -0.69
PHGDH-221ENST00000641573 SERPINE2P07093 398 aa10.73□□□□□ -0.69
PHGDH-221ENST00000641573 PPIAL4GP0DN37 164 aa10.73□□□□□ -0.69
PHGDH-221ENST00000641573 RPL30P62888 115 aaKnown RBP10.73□□□□□ -0.69
PHGDH-221ENST00000641573 FGL1Q08830 312 aa10.73□□□□□ -0.69
PHGDH-221ENST00000641573 CATR1Q13166 79 aa10.73□□□□□ -0.69
PHGDH-221ENST00000641573 SLC35G3Q8N808 338 aa10.73□□□□□ -0.69
PHGDH-221ENST00000641573 LY6G5BQ8NDX9 201 aa10.73□□□□□ -0.69
PHGDH-221ENST00000641573 GRPEL2Q8TAA5 225 aa10.73□□□□□ -0.69
PHGDH-221ENST00000641573 C8orf46Q8TAG6 207 aa10.73□□□□□ -0.69
PHGDH-221ENST00000641573 IL22RA2Q969J5 263 aa10.73□□□□□ -0.69
PHGDH-221ENST00000641573 HSD17B10Q99714 261 aaKnown RBP10.73□□□□□ -0.69
PHGDH-221ENST00000641573 GAB2Q9UQC2 676 aa10.73□□□□□ -0.69
PHGDH-221ENST00000641573 TMED3Q9Y3Q3 217 aa10.73□□□□□ -0.69
PHGDH-221ENST00000641573 DSCAML1Q8TD84 2053 aa10.72□□□□□ -0.69
PHGDH-221ENST00000641573 DUXBA0A1W2PPF3 345 aa10.72□□□□□ -0.69
PHGDH-221ENST00000641573 C22orf46C9J442 243 aa10.72□□□□□ -0.69
PHGDH-221ENST00000641573 M0R1X1 148 aa10.72□□□□□ -0.69
PHGDH-221ENST00000641573 HAX1O00165 279 aa10.72□□□□□ -0.69
PHGDH-221ENST00000641573 IAH1Q2TAA2 248 aaPredicted RBP10.72□□□□□ -0.69
PHGDH-221ENST00000641573 ZNF585BQ52M93 769 aa10.72□□□□□ -0.69
PHGDH-221ENST00000641573 ESCO2Q56NI9 601 aa10.72□□□□□ -0.69
PHGDH-221ENST00000641573 RPL39P5Q59GN2 51 aa10.72□□□□□ -0.69
PHGDH-221ENST00000641573 SLC25A48Q6ZT89 311 aaKnown RBP10.72□□□□□ -0.69
PHGDH-221ENST00000641573 LYG1Q8N1E2 194 aa10.72□□□□□ -0.69
PHGDH-221ENST00000641573 C9orf62Q8N4C0 152 aa10.72□□□□□ -0.69
PHGDH-221ENST00000641573 C11orf42Q8N5U0 333 aa10.72□□□□□ -0.69
PHGDH-221ENST00000641573 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.72□□□□□ -0.69
PHGDH-221ENST00000641573 PPP1R1CQ8WVI7 109 aa10.72□□□□□ -0.69
PHGDH-221ENST00000641573 TCTEX1D2Q8WW35 142 aa10.72□□□□□ -0.69
PHGDH-221ENST00000641573 RBPMSQ93062 196 aaKnown RBP10.72□□□□□ -0.69
PHGDH-221ENST00000641573 PERPQ96FX8 193 aa10.72□□□□□ -0.69
PHGDH-221ENST00000641573 SSBP3Q9BWW4 388 aaPredicted RBP10.72□□□□□ -0.69
PHGDH-221ENST00000641573 BARX1Q9HBU1 254 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms