RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-216	ENST00000641375	PDZD9	Q8IXQ8	264 aa		13.64	□□□□□ -0.23
PHGDH-216	ENST00000641375	ITLN2	Q8WWU7	325 aa	Predicted RBP	13.64	□□□□□ -0.23
PHGDH-216	ENST00000641375	RRNAD1	Q96FB5	475 aa	Known RBP	13.64	□□□□□ -0.23
PHGDH-216	ENST00000641375	CLN8	Q9UBY8	286 aa		13.64	□□□□□ -0.23
PHGDH-216	ENST00000641375	RNF150	Q9ULK6	438 aa		13.64	□□□□□ -0.23
PHGDH-216	ENST00000641375	LSM5	Q9Y4Y9	91 aa	Known RBP	13.64	□□□□□ -0.23
PHGDH-216	ENST00000641375	ST8SIA3	O43173	380 aa		13.63	□□□□□ -0.23
PHGDH-216	ENST00000641375	ZNF16	P17020	682 aa	Predicted RBP	13.63	□□□□□ -0.23
PHGDH-216	ENST00000641375	LOXL3	P58215	753 aa		13.63	□□□□□ -0.23
PHGDH-216	ENST00000641375	OR4D5	Q8NGN0	318 aa		13.63	□□□□□ -0.23
PHGDH-216	ENST00000641375	CORO2A	Q92828	525 aa		13.63	□□□□□ -0.23
PHGDH-216	ENST00000641375	AGMAT	Q9BSE5	352 aa		13.63	□□□□□ -0.23
PHGDH-216	ENST00000641375	NKX6-2	Q9C056	277 aa	Predicted RBP	13.63	□□□□□ -0.23
PHGDH-216	ENST00000641375	SLC25A10	Q9UBX3	287 aa	Predicted RBP	13.63	□□□□□ -0.23
PHGDH-216	ENST00000641375	hADV38S2	A0JD32	116 aa		13.62	□□□□□ -0.23
PHGDH-216	ENST00000641375	ZNF729	A6NN14	1252 aa	Predicted RBP	13.62	□□□□□ -0.23
PHGDH-216	ENST00000641375		E5RGE8	158 aa		13.62	□□□□□ -0.23
PHGDH-216	ENST00000641375		K7EPK0	472 aa		13.62	□□□□□ -0.23
PHGDH-216	ENST00000641375	LTC4S	Q16873	150 aa		13.62	□□□□□ -0.23
PHGDH-216	ENST00000641375	TMEM30B	Q3MIR4	351 aa		13.62	□□□□□ -0.23
PHGDH-216	ENST00000641375	FAM71E2	Q8N5Q1	922 aa		13.62	□□□□□ -0.23
PHGDH-216	ENST00000641375	TCTEX1D1	Q8N7M0	179 aa		13.62	□□□□□ -0.23
PHGDH-216	ENST00000641375	ABHD14B	Q96IU4	210 aa		13.62	□□□□□ -0.23
PHGDH-216	ENST00000641375	PSG11	Q9UQ72	335 aa		13.62	□□□□□ -0.23
PHGDH-216	ENST00000641375	NSG2	Q9Y328	171 aa		13.62	□□□□□ -0.23
PHGDH-216	ENST00000641375	KCNAB3	O43448	404 aa		13.62	□□□□□ -0.23
PHGDH-216	ENST00000641375	ADAM20	O43506	726 aa		13.62	□□□□□ -0.23
PHGDH-216	ENST00000641375	SPDEF	O95238	335 aa		13.62	□□□□□ -0.23
PHGDH-216	ENST00000641375	SLC25A6	P12236	298 aa		13.62	□□□□□ -0.23
PHGDH-216	ENST00000641375	NDUFB7	P17568	137 aa		13.62	□□□□□ -0.23
PHGDH-216	ENST00000641375	MEF2C	Q06413	473 aa	Predicted RBP	13.62	□□□□□ -0.23
PHGDH-216	ENST00000641375	C17orf58	Q2M2W7	97 aa		13.62	□□□□□ -0.23
PHGDH-216	ENST00000641375	FAM53A	Q6NSI3	398 aa	Predicted RBP	13.62	□□□□□ -0.23
PHGDH-216	ENST00000641375	ZNF66	Q6ZN08	573 aa		13.62	□□□□□ -0.23
PHGDH-216	ENST00000641375	FAM219A	Q8IW50	185 aa		13.62	□□□□□ -0.23
PHGDH-216	ENST00000641375	LSM10	Q969L4	123 aa	Known RBP	13.62	□□□□□ -0.23
PHGDH-216	ENST00000641375	ZNF471	Q9BX82	626 aa	Predicted RBP	13.62	□□□□□ -0.23
PHGDH-216	ENST00000641375	PLEKHA2	Q9HB19	425 aa		13.62	□□□□□ -0.23
PHGDH-216	ENST00000641375	POMT1	Q9Y6A1	747 aa		13.62	□□□□□ -0.23
PHGDH-216	ENST00000641375	TRAV20	A0A0B4J274	112 aa		13.61	□□□□□ -0.23
PHGDH-216	ENST00000641375		F5H0A9	414 aa	Predicted RBP	13.61	□□□□□ -0.23
PHGDH-216	ENST00000641375	ITGB1BP1	O14713	200 aa		13.61	□□□□□ -0.23
PHGDH-216	ENST00000641375	FABP1	P07148	127 aa		13.61	□□□□□ -0.23
PHGDH-216	ENST00000641375	NKX2-1	P43699	371 aa	Predicted RBP	13.61	□□□□□ -0.23
PHGDH-216	ENST00000641375	SST	P61278	116 aa		13.61	□□□□□ -0.23
PHGDH-216	ENST00000641375	EIF4EBP1	Q13541	118 aa	Predicted RBP	13.61	□□□□□ -0.23
PHGDH-216	ENST00000641375	HSD17B10	Q99714	261 aa	Known RBP	13.61	□□□□□ -0.23
PHGDH-216	ENST00000641375	LINC00574	Q9H8X3	128 aa		13.61	□□□□□ -0.23
PHGDH-216	ENST00000641375	FAM212B	Q9NTI7	297 aa	Predicted RBP	13.61	□□□□□ -0.23
PHGDH-216	ENST00000641375	KAAG1	Q9UBP8	84 aa		13.61	□□□□□ -0.23
PHGDH-216	ENST00000641375	LINC00312	Q9Y6C7	94 aa		13.61	□□□□□ -0.23
PHGDH-216	ENST00000641375	SPTBN1	Q01082	2364 aa	Known RBP	13.61	□□□□□ -0.23
PHGDH-216	ENST00000641375	TNFRSF13B	O14836	293 aa	Predicted RBP	13.61	□□□□□ -0.23
PHGDH-216	ENST00000641375	ST8SIA5	O15466	376 aa		13.61	□□□□□ -0.23
PHGDH-216	ENST00000641375	LRRC10	Q5BKY1	277 aa		13.61	□□□□□ -0.23
PHGDH-216	ENST00000641375	RNASE11	Q8TAA1	199 aa	Known RBP	13.61	□□□□□ -0.23
PHGDH-216	ENST00000641375	CBLN4	Q9NTU7	201 aa		13.61	□□□□□ -0.23
PHGDH-216	ENST00000641375	TAS2R3	Q9NYW6	316 aa		13.61	□□□□□ -0.23
PHGDH-216	ENST00000641375	ABCA4	P78363	2273 aa		13.6	□□□□□ -0.23
PHGDH-216	ENST00000641375		A0A1B0GU03	582 aa		13.6	□□□□□ -0.23
PHGDH-216	ENST00000641375	MSGN1	A6NI15	193 aa		13.6	□□□□□ -0.23
PHGDH-216	ENST00000641375	NDUFB3	O43676	98 aa		13.6	□□□□□ -0.23
PHGDH-216	ENST00000641375	FSTL3	O95633	263 aa		13.6	□□□□□ -0.23
PHGDH-216	ENST00000641375	SMIM6	P0DI80	62 aa		13.6	□□□□□ -0.23
PHGDH-216	ENST00000641375	OMG	P23515	440 aa		13.6	□□□□□ -0.23
PHGDH-216	ENST00000641375	RPL12	P30050	165 aa	Known RBP	13.6	□□□□□ -0.23
PHGDH-216	ENST00000641375	GPR12	P47775	334 aa		13.6	□□□□□ -0.23
PHGDH-216	ENST00000641375	RAB7A	P51149	207 aa		13.6	□□□□□ -0.23
PHGDH-216	ENST00000641375	ZNF585B	Q52M93	769 aa		13.6	□□□□□ -0.23
PHGDH-216	ENST00000641375	GFOD1	Q9NXC2	390 aa		13.6	□□□□□ -0.23
PHGDH-216	ENST00000641375	LPAR3	Q9UBY5	353 aa		13.6	□□□□□ -0.23
PHGDH-216	ENST00000641375	TAAR5	O14804	337 aa		13.59	□□□□□ -0.23
PHGDH-216	ENST00000641375	CLDN1	O95832	211 aa		13.59	□□□□□ -0.23
PHGDH-216	ENST00000641375	HKR1	P10072	659 aa		13.59	□□□□□ -0.23
PHGDH-216	ENST00000641375	AKR1C2	P52895	323 aa		13.59	□□□□□ -0.23
PHGDH-216	ENST00000641375	ALKAL2	Q6UX46	152 aa		13.59	□□□□□ -0.23
PHGDH-216	ENST00000641375	TCF23	Q7RTU1	214 aa		13.59	□□□□□ -0.23
PHGDH-216	ENST00000641375	PHYHIPL	Q96FC7	376 aa		13.59	□□□□□ -0.23
PHGDH-216	ENST00000641375	C5orf30	Q96GV9	206 aa		13.59	□□□□□ -0.23
PHGDH-216	ENST00000641375	ZNF251	Q9BRH9	671 aa		13.59	□□□□□ -0.23
PHGDH-216	ENST00000641375	RAB1B	Q9H0U4	201 aa		13.59	□□□□□ -0.23
PHGDH-216	ENST00000641375	GAL3ST2	Q9H3Q3	398 aa		13.59	□□□□□ -0.23
PHGDH-216	ENST00000641375	ATG12	O94817	140 aa		13.59	□□□□□ -0.23
PHGDH-216	ENST00000641375	IGKV1-39	P01597	117 aa		13.59	□□□□□ -0.23
PHGDH-216	ENST00000641375	IGKV1D-39	P04432	117 aa		13.59	□□□□□ -0.23
PHGDH-216	ENST00000641375	PVALB	P20472	110 aa	Predicted RBP	13.59	□□□□□ -0.23
PHGDH-216	ENST00000641375	P2RY1	P47900	373 aa		13.59	□□□□□ -0.23
PHGDH-216	ENST00000641375	RPL31	P62899	125 aa	Known RBP	13.59	□□□□□ -0.23
PHGDH-216	ENST00000641375	IDI2-AS1	Q9NZ38	188 aa		13.59	□□□□□ -0.23
PHGDH-216	ENST00000641375	USF3	Q68DE3	2245 aa		13.59	□□□□□ -0.23
PHGDH-216	ENST00000641375	IGSF10	Q6WRI0	2623 aa		13.58	□□□□□ -0.23
PHGDH-216	ENST00000641375	DEFA5	Q01523	94 aa		13.58	□□□□□ -0.24
PHGDH-216	ENST00000641375		Q3ZCU0	254 aa		13.58	□□□□□ -0.24
PHGDH-216	ENST00000641375	OR10A7	Q8NGE5	316 aa		13.58	□□□□□ -0.24
PHGDH-216	ENST00000641375	STOML3	Q8TAV4	291 aa		13.58	□□□□□ -0.24
PHGDH-216	ENST00000641375	TCTEX1D2	Q8WW35	142 aa		13.58	□□□□□ -0.24
PHGDH-216	ENST00000641375	LAMP3	Q9UQV4	416 aa		13.58	□□□□□ -0.24
PHGDH-216	ENST00000641375	LPAR6	P43657	344 aa		13.58	□□□□□ -0.24
PHGDH-216	ENST00000641375	GPR157	Q5UAW9	335 aa		13.58	□□□□□ -0.24
PHGDH-216	ENST00000641375	BTNL3	Q6UXE8	466 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms