RNA–Protein interactions for RNA: ENST00000639943.1

PAX6-261, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-261ENST00000639943 MFSD2BA6NFX1 497 aa10.18□□□□□ -0.78
PAX6-261ENST00000639943 F2RL2O00254 374 aa10.18□□□□□ -0.78
PAX6-261ENST00000639943 WRBO00258 174 aa10.18□□□□□ -0.78
PAX6-261ENST00000639943 TXNL1O43396 289 aa10.18□□□□□ -0.78
PAX6-261ENST00000639943 IGKV1-39P01597 117 aa10.18□□□□□ -0.78
PAX6-261ENST00000639943 IGKV1D-39P04432 117 aa10.18□□□□□ -0.78
PAX6-261ENST00000639943 IGHV3-43DP0DP04 118 aa10.18□□□□□ -0.78
PAX6-261ENST00000639943 EIF4EBP1Q13541 118 aaPredicted RBP10.18□□□□□ -0.78
PAX6-261ENST00000639943 CXorf66Q5JRM2 361 aaPredicted RBP10.18□□□□□ -0.78
PAX6-261ENST00000639943 ZNF788Q6ZQV5 615 aa10.18□□□□□ -0.78
PAX6-261ENST00000639943 C1orf87Q8N0U7 546 aa10.18□□□□□ -0.78
PAX6-261ENST00000639943 SAP30LQ9HAJ7 183 aa10.18□□□□□ -0.78
PAX6-261ENST00000639943 USF3Q68DE3 2245 aa10.17□□□□□ -0.78
PAX6-261ENST00000639943 I3L521 148 aa10.17□□□□□ -0.78
PAX6-261ENST00000639943 YPEL1O60688 119 aa10.17□□□□□ -0.78
PAX6-261ENST00000639943 PITX3O75364 302 aa10.17□□□□□ -0.78
PAX6-261ENST00000639943 APOBEC3AP31941 199 aaPredicted RBP10.17□□□□□ -0.78
PAX6-261ENST00000639943 AKR1C2P52895 323 aa10.17□□□□□ -0.78
PAX6-261ENST00000639943 VAMP2P63027 116 aa10.17□□□□□ -0.78
PAX6-261ENST00000639943 FAM53AQ6NSI3 398 aaPredicted RBP10.17□□□□□ -0.78
PAX6-261ENST00000639943 ZNF66Q6ZN08 573 aa10.17□□□□□ -0.78
PAX6-261ENST00000639943 OR2C3Q8N628 320 aa10.17□□□□□ -0.78
PAX6-261ENST00000639943 TCTEX1D1Q8N7M0 179 aa10.17□□□□□ -0.78
PAX6-261ENST00000639943 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.17□□□□□ -0.78
PAX6-261ENST00000639943 RNF141Q8WVD5 230 aa10.17□□□□□ -0.78
PAX6-261ENST00000639943 YPEL2Q96QA6 119 aa10.17□□□□□ -0.78
PAX6-261ENST00000639943 FAM212BQ9NTI7 297 aaPredicted RBP10.17□□□□□ -0.78
PAX6-261ENST00000639943 GNG12Q9UBI6 72 aa10.17□□□□□ -0.78
PAX6-261ENST00000639943 TRAV38-1A0A0B4J264 116 aa10.17□□□□□ -0.78
PAX6-261ENST00000639943 A0A0G2JRQ6 117 aa10.17□□□□□ -0.78
PAX6-261ENST00000639943 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.17□□□□□ -0.78
PAX6-261ENST00000639943 NKX6-3A6NJ46 265 aa10.17□□□□□ -0.78
PAX6-261ENST00000639943 NDUFS8O00217 210 aa10.17□□□□□ -0.78
PAX6-261ENST00000639943 GYPAP02724 150 aa10.17□□□□□ -0.78
PAX6-261ENST00000639943 EPHA1P21709 976 aa10.17□□□□□ -0.78
PAX6-261ENST00000639943 ADORA2A-AS1P86434 159 aa10.17□□□□□ -0.78
PAX6-261ENST00000639943 MORN2Q502X0 79 aa10.17□□□□□ -0.78
PAX6-261ENST00000639943 ZNF808Q8N4W9 903 aaPredicted RBP10.17□□□□□ -0.78
PAX6-261ENST00000639943 TMED6Q8WW62 240 aa10.17□□□□□ -0.78
PAX6-261ENST00000639943 CCL13Q99616 98 aa10.17□□□□□ -0.78
PAX6-261ENST00000639943 SLC25A31Q9H0C2 315 aa10.17□□□□□ -0.78
PAX6-261ENST00000639943 MS4A5Q9H3V2 200 aa10.17□□□□□ -0.78
PAX6-261ENST00000639943 DYNLRB1Q9NP97 96 aa10.17□□□□□ -0.78
PAX6-261ENST00000639943 CALYQ9NYX4 217 aa10.17□□□□□ -0.78
PAX6-261ENST00000639943 PSG11Q9UQ72 335 aa10.17□□□□□ -0.78
PAX6-261ENST00000639943 TRGV10A0A0A0MS01 117 aa10.16□□□□□ -0.78
PAX6-261ENST00000639943 MEX3AA1L020 520 aaKnown RBP10.16□□□□□ -0.78
PAX6-261ENST00000639943 DEFB108AA8MXU0 73 aa10.16□□□□□ -0.78
PAX6-261ENST00000639943 LGALS8O00214 317 aa10.16□□□□□ -0.78
PAX6-261ENST00000639943 TSPAN4O14817 238 aa10.16□□□□□ -0.78
PAX6-261ENST00000639943 SIGLEC5O15389 551 aa10.16□□□□□ -0.78
PAX6-261ENST00000639943 FGF16O43320 207 aa10.16□□□□□ -0.78
PAX6-261ENST00000639943 SSSCA1O60232 199 aa10.16□□□□□ -0.78
PAX6-261ENST00000639943 FABP1P07148 127 aa10.16□□□□□ -0.78
PAX6-261ENST00000639943 CGB3P0DN86 165 aa10.16□□□□□ -0.78
PAX6-261ENST00000639943 CGB7P0DN87 165 aa10.16□□□□□ -0.78
PAX6-261ENST00000639943 LPAR6P43657 344 aa10.16□□□□□ -0.78
PAX6-261ENST00000639943 ODF1Q14990 250 aa10.16□□□□□ -0.78
PAX6-261ENST00000639943 EFNB3Q15768 340 aa10.16□□□□□ -0.78
PAX6-261ENST00000639943 LTC4SQ16873 150 aa10.16□□□□□ -0.78
PAX6-261ENST00000639943 TOR2AQ5JU69 321 aa10.16□□□□□ -0.78
PAX6-261ENST00000639943 WDR73Q6P4I2 378 aa10.16□□□□□ -0.78
PAX6-261ENST00000639943 ZCCHC24Q8N2G6 241 aaKnown RBP10.16□□□□□ -0.78
PAX6-261ENST00000639943 UBAC2Q8NBM4 344 aa10.16□□□□□ -0.78
PAX6-261ENST00000639943 LINC01560Q8TB33 94 aa10.16□□□□□ -0.78
PAX6-261ENST00000639943 C5orf30Q96GV9 206 aa10.16□□□□□ -0.78
PAX6-261ENST00000639943 HSD17B10Q99714 261 aaKnown RBP10.16□□□□□ -0.78
PAX6-261ENST00000639943 SMIM3Q9BZL3 60 aa10.16□□□□□ -0.78
PAX6-261ENST00000639943 MAGT1Q9H0U3 335 aa10.16□□□□□ -0.78
PAX6-261ENST00000639943 BORCS7-ASMTA0A0B4J1R7 106 aa10.16□□□□□ -0.78
PAX6-261ENST00000639943 ATG12O94817 140 aa10.16□□□□□ -0.78
PAX6-261ENST00000639943 CLDN1O95832 211 aa10.16□□□□□ -0.78
PAX6-261ENST00000639943 IGKV1-5P01602 117 aa10.16□□□□□ -0.78
PAX6-261ENST00000639943 HSD17B13Q7Z5P4 300 aaPredicted RBP10.16□□□□□ -0.78
PAX6-261ENST00000639943 TGIF2LYQ8IUE0 185 aa10.16□□□□□ -0.78
PAX6-261ENST00000639943 AGMATQ9BSE5 352 aa10.16□□□□□ -0.78
PAX6-261ENST00000639943 LYRM2Q9NU23 88 aaPredicted RBP10.16□□□□□ -0.78
PAX6-261ENST00000639943 B9A039 149 aa10.15□□□□□ -0.78
PAX6-261ENST00000639943 TMEM178BH3BS89 294 aa10.15□□□□□ -0.78
PAX6-261ENST00000639943 BMI1P35226 326 aa10.15□□□□□ -0.78
PAX6-261ENST00000639943 CAV2P51636 162 aa10.15□□□□□ -0.78
PAX6-261ENST00000639943 LOXL3P58215 753 aa10.15□□□□□ -0.78
PAX6-261ENST00000639943 RPL30P62888 115 aaKnown RBP10.15□□□□□ -0.78
PAX6-261ENST00000639943 EWSR1Q01844 656 aaKnown RBP eCLIP10.15□□□□□ -0.78
PAX6-261ENST00000639943 EIF4E3Q8N5X7 224 aaKnown RBP10.15□□□□□ -0.78
PAX6-261ENST00000639943 TCTEX1D2Q8WW35 142 aa10.15□□□□□ -0.78
PAX6-261ENST00000639943 NEUROG1Q92886 237 aa10.15□□□□□ -0.78
PAX6-261ENST00000639943 BARX1Q9HBU1 254 aaPredicted RBP10.15□□□□□ -0.78
PAX6-261ENST00000639943 CACNG5Q9UF02 275 aa10.15□□□□□ -0.78
PAX6-261ENST00000639943 RNF115Q9Y4L5 304 aa10.15□□□□□ -0.78
PAX6-261ENST00000639943 DIDO1Q9BTC0 2240 aaKnown RBP10.15□□□□□ -0.79
PAX6-261ENST00000639943 NCOR2Q9Y618 2525 aa10.15□□□□□ -0.79
PAX6-261ENST00000639943 KBTBD11-OT1A0A1B0GTJ5 212 aa10.15□□□□□ -0.79
PAX6-261ENST00000639943 FAM24AA6NFZ4 105 aa10.15□□□□□ -0.79
PAX6-261ENST00000639943 ITGB1BP1O14713 200 aa10.15□□□□□ -0.79
PAX6-261ENST00000639943 CHST1O43916 411 aa10.15□□□□□ -0.79
PAX6-261ENST00000639943 GPR12P47775 334 aa10.15□□□□□ -0.79
PAX6-261ENST00000639943 NHLH2Q02577 135 aa10.15□□□□□ -0.79
PAX6-261ENST00000639943 LY6DQ14210 128 aa10.15□□□□□ -0.79
PAX6-261ENST00000639943 DUX4L9Q6RFH8 374 aaPredicted RBP10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms