RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 A0A0G2JLM5 398 aa11.43□□□□□ -0.58
SYNE2-228ENST00000639659 IZUMO1RA6ND01 250 aa11.43□□□□□ -0.58
SYNE2-228ENST00000639659 H3BNX3 289 aa11.43□□□□□ -0.58
SYNE2-228ENST00000639659 APELAP0DMC3 54 aa11.43□□□□□ -0.58
SYNE2-228ENST00000639659 DCKP27707 260 aa11.43□□□□□ -0.58
SYNE2-228ENST00000639659 CD81P60033 236 aa11.43□□□□□ -0.58
SYNE2-228ENST00000639659 RPS11P62280 158 aaKnown RBP eCLIP11.43□□□□□ -0.58
SYNE2-228ENST00000639659 ZNF562Q6V9R5 426 aa11.43□□□□□ -0.58
SYNE2-228ENST00000639659 C6orf201Q7Z4U5 140 aa11.43□□□□□ -0.58
SYNE2-228ENST00000639659 TSNAXQ99598 290 aaKnown RBP11.43□□□□□ -0.58
SYNE2-228ENST00000639659 COA4Q9NYJ1 87 aa11.43□□□□□ -0.58
SYNE2-228ENST00000639659 OR1A1Q9P1Q5 309 aa11.43□□□□□ -0.58
SYNE2-228ENST00000639659 EXOSC1Q9Y3B2 195 aaKnown RBP11.43□□□□□ -0.58
SYNE2-228ENST00000639659 LRRC42Q9Y546 428 aa11.43□□□□□ -0.58
SYNE2-228ENST00000639659 TRBV5-7A0A0A0MS05 114 aa11.42□□□□□ -0.58
SYNE2-228ENST00000639659 SHISA3A0PJX4 238 aa11.42□□□□□ -0.58
SYNE2-228ENST00000639659 DYNC1I1O14576 645 aa11.42□□□□□ -0.58
SYNE2-228ENST00000639659 TRBV12-3P01733 135 aa11.42□□□□□ -0.58
SYNE2-228ENST00000639659 LINC00205P59089 165 aa11.42□□□□□ -0.58
SYNE2-228ENST00000639659 KLF5Q13887 457 aaPredicted RBP11.42□□□□□ -0.58
SYNE2-228ENST00000639659 TATDN3Q17R31 274 aa11.42□□□□□ -0.58
SYNE2-228ENST00000639659 RPEL1Q2QD12 228 aa11.42□□□□□ -0.58
SYNE2-228ENST00000639659 LY6G6FQ5SQ64 297 aa11.42□□□□□ -0.58
SYNE2-228ENST00000639659 Q8N402 240 aa11.42□□□□□ -0.58
SYNE2-228ENST00000639659 SVOPQ8N4V2 548 aa11.42□□□□□ -0.58
SYNE2-228ENST00000639659 PGLYRP3Q96LB9 341 aa11.42□□□□□ -0.58
SYNE2-228ENST00000639659 C9orf16Q9BUW7 83 aa11.42□□□□□ -0.58
SYNE2-228ENST00000639659 HIPK2Q9H2X6 1198 aa11.42□□□□□ -0.58
SYNE2-228ENST00000639659 KCNK15Q9H427 330 aa11.42□□□□□ -0.58
SYNE2-228ENST00000639659 WBP4O75554 376 aaKnown RBP11.41□□□□□ -0.58
SYNE2-228ENST00000639659 ATP5HO75947 161 aa11.41□□□□□ -0.58
SYNE2-228ENST00000639659 TPPPO94811 219 aa11.41□□□□□ -0.58
SYNE2-228ENST00000639659 APOA2P02652 100 aa11.41□□□□□ -0.58
SYNE2-228ENST00000639659 IGKV1-16P04430 117 aa11.41□□□□□ -0.58
SYNE2-228ENST00000639659 CSN3P07498 182 aa11.41□□□□□ -0.58
SYNE2-228ENST00000639659 CEACAM6P40199 344 aa11.41□□□□□ -0.58
SYNE2-228ENST00000639659 MED21Q13503 144 aa11.41□□□□□ -0.58
SYNE2-228ENST00000639659 DYRK1AQ13627 763 aa11.41□□□□□ -0.58
SYNE2-228ENST00000639659 IL34Q6ZMJ4 242 aa11.41□□□□□ -0.58
SYNE2-228ENST00000639659 NKAIN3Q8N8D7 197 aa11.41□□□□□ -0.58
SYNE2-228ENST00000639659 BVESQ8NE79 360 aa11.41□□□□□ -0.58
SYNE2-228ENST00000639659 ZNF555Q8NEP9 628 aa11.41□□□□□ -0.58
SYNE2-228ENST00000639659 OR5AN1Q8NGI8 311 aa11.41□□□□□ -0.58
SYNE2-228ENST00000639659 DERL3Q96Q80 235 aa11.41□□□□□ -0.58
SYNE2-228ENST00000639659 PHB2Q99623 299 aa11.41□□□□□ -0.58
SYNE2-228ENST00000639659 SLC29A1Q99808 456 aa11.41□□□□□ -0.58
SYNE2-228ENST00000639659 NICN1Q9BSH3 213 aa11.41□□□□□ -0.58
SYNE2-228ENST00000639659 KRTAP17-1Q9BYP8 105 aa11.41□□□□□ -0.58
SYNE2-228ENST00000639659 WFDC10AQ9H1F0 79 aa11.41□□□□□ -0.58
SYNE2-228ENST00000639659 PEF1Q9UBV8 284 aaKnown RBP11.41□□□□□ -0.58
SYNE2-228ENST00000639659 IRGMA1A4Y4 181 aa11.4□□□□□ -0.58
SYNE2-228ENST00000639659 H3BUA1 57 aa11.4□□□□□ -0.58
SYNE2-228ENST00000639659 SPDEFO95238 335 aa11.4□□□□□ -0.58
SYNE2-228ENST00000639659 BRI3O95415 125 aa11.4□□□□□ -0.58
SYNE2-228ENST00000639659 LGALS7P47929 136 aa11.4□□□□□ -0.58
SYNE2-228ENST00000639659 MOGAT2Q3SYC2 334 aa11.4□□□□□ -0.58
SYNE2-228ENST00000639659 DEFB125Q8N687 156 aa11.4□□□□□ -0.58
SYNE2-228ENST00000639659 DYNLRB2Q8TF09 96 aa11.4□□□□□ -0.58
SYNE2-228ENST00000639659 NEURL2Q9BR09 285 aa11.4□□□□□ -0.58
SYNE2-228ENST00000639659 HDHD3Q9BSH5 251 aaPredicted RBP11.4□□□□□ -0.58
SYNE2-228ENST00000639659 THAP7Q9BT49 309 aaPredicted RBP11.4□□□□□ -0.58
SYNE2-228ENST00000639659 TMEM59Q9BXS4 323 aa11.4□□□□□ -0.58
SYNE2-228ENST00000639659 C11orf54Q9H0W9 315 aaPredicted RBP11.4□□□□□ -0.58
SYNE2-228ENST00000639659 ZNF221Q9UK13 617 aa11.4□□□□□ -0.58
SYNE2-228ENST00000639659 DIMT1Q9UNQ2 313 aaKnown RBP11.4□□□□□ -0.58
SYNE2-228ENST00000639659 ALMS1Q8TCU4 4167 aa11.4□□□□□ -0.58
SYNE2-228ENST00000639659 A0A0B4J203 849 aa11.39□□□□□ -0.59
SYNE2-228ENST00000639659 M0R1X1 148 aa11.39□□□□□ -0.59
SYNE2-228ENST00000639659 LY6G6CO95867 125 aa11.39□□□□□ -0.59
SYNE2-228ENST00000639659 PJVKQ0ZLH3 352 aa11.39□□□□□ -0.59
SYNE2-228ENST00000639659 GUCA2BQ16661 112 aa11.39□□□□□ -0.59
SYNE2-228ENST00000639659 RNLSQ5VYX0 342 aa11.39□□□□□ -0.59
SYNE2-228ENST00000639659 ZFP1Q6P2D0 407 aa11.39□□□□□ -0.59
SYNE2-228ENST00000639659 MOB1BQ7L9L4 216 aa11.39□□□□□ -0.59
SYNE2-228ENST00000639659 CDH26Q8IXH8 852 aa11.39□□□□□ -0.59
SYNE2-228ENST00000639659 ZNF383Q8NA42 475 aa11.39□□□□□ -0.59
SYNE2-228ENST00000639659 EDARADDQ8WWZ3 215 aa11.39□□□□□ -0.59
SYNE2-228ENST00000639659 TMEM80Q96HE8 168 aa11.39□□□□□ -0.59
SYNE2-228ENST00000639659 RNF5Q99942 180 aa11.39□□□□□ -0.59
SYNE2-228ENST00000639659 UQCC2Q9BRT2 126 aa11.39□□□□□ -0.59
SYNE2-228ENST00000639659 SRD5A3Q9H8P0 318 aa11.39□□□□□ -0.59
SYNE2-228ENST00000639659 SLC35D1Q9NTN3 355 aa11.39□□□□□ -0.59
SYNE2-228ENST00000639659 SLC2A8Q9NY64 477 aa11.39□□□□□ -0.59
SYNE2-228ENST00000639659 CD7P09564 240 aa11.38□□□□□ -0.59
SYNE2-228ENST00000639659 CELP19835 753 aa11.38□□□□□ -0.59
SYNE2-228ENST00000639659 AADACP22760 399 aa11.38□□□□□ -0.59
SYNE2-228ENST00000639659 ZBTB25P24278 435 aa11.38□□□□□ -0.59
SYNE2-228ENST00000639659 HTR2CP28335 458 aa11.38□□□□□ -0.59
SYNE2-228ENST00000639659 RPS27AP62979 156 aaKnown RBP11.38□□□□□ -0.59
SYNE2-228ENST00000639659 HLA-DRB3P79483 266 aa11.38□□□□□ -0.59
SYNE2-228ENST00000639659 PMS2P11Q13670 270 aa11.38□□□□□ -0.59
SYNE2-228ENST00000639659 PDPNQ86YL7 162 aa11.38□□□□□ -0.59
SYNE2-228ENST00000639659 GGHQ92820 318 aa11.38□□□□□ -0.59
SYNE2-228ENST00000639659 TINAGL1Q9GZM7 467 aaPredicted RBP11.38□□□□□ -0.59
SYNE2-228ENST00000639659 PLEKHJ1Q9NW61 149 aa11.38□□□□□ -0.59
SYNE2-228ENST00000639659 PEMTQ9UBM1 199 aa11.38□□□□□ -0.59
SYNE2-228ENST00000639659 GHRLQ9UBU3 117 aa11.38□□□□□ -0.59
SYNE2-228ENST00000639659 SELENOKQ9Y6D0 94 aa11.38□□□□□ -0.59
SYNE2-228ENST00000639659 MPPED1O15442 326 aa11.37□□□□□ -0.59
SYNE2-228ENST00000639659 NAPSAO96009 420 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms