RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 PSMD7P51665 324 aa13.84□□□□□ -0.19
PNKP-230ENST00000638016 REC114Q7Z4M0 266 aa13.84□□□□□ -0.19
PNKP-230ENST00000638016 RNF152Q8N8N0 203 aa13.84□□□□□ -0.19
PNKP-230ENST00000638016 ZNF383Q8NA42 475 aa13.84□□□□□ -0.19
PNKP-230ENST00000638016 CASTOR1Q8WTX7 329 aa13.84□□□□□ -0.19
PNKP-230ENST00000638016 C5orf30Q96GV9 206 aa13.84□□□□□ -0.19
PNKP-230ENST00000638016 OR51E2Q9H255 320 aa13.84□□□□□ -0.19
PNKP-230ENST00000638016 RNF167Q9H6Y7 350 aa13.84□□□□□ -0.19
PNKP-230ENST00000638016 GAB2Q9UQC2 676 aa13.84□□□□□ -0.19
PNKP-230ENST00000638016 IGKV1D-8A0A087WSZ0 117 aa13.83□□□□□ -0.2
PNKP-230ENST00000638016 H7C2Y5 167 aa13.83□□□□□ -0.2
PNKP-230ENST00000638016 CCL24O00175 119 aa13.83□□□□□ -0.2
PNKP-230ENST00000638016 ITGB1BP1O14713 200 aa13.83□□□□□ -0.2
PNKP-230ENST00000638016 BET1O15155 118 aa13.83□□□□□ -0.2
PNKP-230ENST00000638016 FABP7O15540 132 aa13.83□□□□□ -0.2
PNKP-230ENST00000638016 MRPS14O60783 128 aaKnown RBP13.83□□□□□ -0.2
PNKP-230ENST00000638016 HIST1H1DP16402 221 aaKnown RBP13.83□□□□□ -0.2
PNKP-230ENST00000638016 PPIFP30405 207 aaKnown RBP13.83□□□□□ -0.2
PNKP-230ENST00000638016 LIN54Q6MZP7 749 aa13.83□□□□□ -0.2
PNKP-230ENST00000638016 OR5AN1Q8NGI8 311 aa13.83□□□□□ -0.2
PNKP-230ENST00000638016 PTX4Q96A99 478 aa13.83□□□□□ -0.2
PNKP-230ENST00000638016 OR5B12Q96R08 314 aa13.83□□□□□ -0.2
PNKP-230ENST00000638016 GON7Q9BXV9 100 aa13.83□□□□□ -0.2
PNKP-230ENST00000638016 GNB4Q9HAV0 340 aa13.83□□□□□ -0.2
PNKP-230ENST00000638016 TPSG1Q9NRR2 321 aa13.83□□□□□ -0.2
PNKP-230ENST00000638016 KIAA1456Q9P272 454 aa13.83□□□□□ -0.2
PNKP-230ENST00000638016 WASHC3Q9Y3C0 194 aa13.83□□□□□ -0.2
PNKP-230ENST00000638016 OR5H14A6NHG9 310 aa13.82□□□□□ -0.2
PNKP-230ENST00000638016 RRHO14718 337 aa13.82□□□□□ -0.2
PNKP-230ENST00000638016 IGKV1-16P04430 117 aa13.82□□□□□ -0.2
PNKP-230ENST00000638016 CLEC2LP0C7M8 214 aa13.82□□□□□ -0.2
PNKP-230ENST00000638016 RAB6AP20340 208 aa13.82□□□□□ -0.2
PNKP-230ENST00000638016 KIAA0141Q14154 515 aaPredicted RBP13.82□□□□□ -0.2
PNKP-230ENST00000638016 ECSCRQ19T08 205 aa13.82□□□□□ -0.2
PNKP-230ENST00000638016 EDARADDQ8WWZ3 215 aa13.82□□□□□ -0.2
PNKP-230ENST00000638016 CLCC1Q96S66 551 aa13.82□□□□□ -0.2
PNKP-230ENST00000638016 FAM103A1Q9BTL3 118 aaKnown RBP13.82□□□□□ -0.2
PNKP-230ENST00000638016 ATG5Q9H1Y0 275 aa13.82□□□□□ -0.2
PNKP-230ENST00000638016 Q9H521 79 aa13.82□□□□□ -0.2
PNKP-230ENST00000638016 MGAT4AQ9UM21 535 aa13.82□□□□□ -0.2
PNKP-230ENST00000638016 STUB1Q9UNE7 303 aa13.82□□□□□ -0.2
PNKP-230ENST00000638016 A3GALT2U3KPV4 340 aa13.82□□□□□ -0.2
PNKP-230ENST00000638016 TRAV41A0A0B4J266 112 aa13.81□□□□□ -0.2
PNKP-230ENST00000638016 M0R1X1 148 aa13.81□□□□□ -0.2
PNKP-230ENST00000638016 SOX15O60248 233 aa13.81□□□□□ -0.2
PNKP-230ENST00000638016 GSTP1P09211 210 aaKnown RBP13.81□□□□□ -0.2
PNKP-230ENST00000638016 GALP22466 123 aa13.81□□□□□ -0.2
PNKP-230ENST00000638016 CDX1P47902 265 aaPredicted RBP13.81□□□□□ -0.2
PNKP-230ENST00000638016 LUMP51884 338 aaPredicted RBP13.81□□□□□ -0.2
PNKP-230ENST00000638016 CX3CL1P78423 397 aa13.81□□□□□ -0.2
PNKP-230ENST00000638016 EGFEM1PQ0D2K5 195 aa13.81□□□□□ -0.2
PNKP-230ENST00000638016 ZNF773Q6PK81 442 aa13.81□□□□□ -0.2
PNKP-230ENST00000638016 OR4A4PQ8NGN8 299 aa13.81□□□□□ -0.2
PNKP-230ENST00000638016 MYOZ3Q8TDC0 251 aa13.81□□□□□ -0.2
PNKP-230ENST00000638016 CABLES2Q9BTV7 478 aa13.81□□□□□ -0.2
PNKP-230ENST00000638016 ZNF580Q9UK33 172 aa13.81□□□□□ -0.2
PNKP-230ENST00000638016 DUS4LO95620 317 aaKnown RBP13.8□□□□□ -0.2
PNKP-230ENST00000638016 OR8U9P0C7N5 309 aa13.8□□□□□ -0.2
PNKP-230ENST00000638016 EGR2P11161 476 aaPredicted RBP13.8□□□□□ -0.2
PNKP-230ENST00000638016 GADD45AP24522 165 aa13.8□□□□□ -0.2
PNKP-230ENST00000638016 FGF9P31371 208 aaPredicted RBP13.8□□□□□ -0.2
PNKP-230ENST00000638016 MRPS15P82914 257 aaKnown RBP13.8□□□□□ -0.2
PNKP-230ENST00000638016 MXD1Q05195 221 aa13.8□□□□□ -0.2
PNKP-230ENST00000638016 KIR2DS1Q14954 304 aa13.8□□□□□ -0.2
PNKP-230ENST00000638016 PLGLAQ15195 96 aa13.8□□□□□ -0.2
PNKP-230ENST00000638016 C19orf54Q5BKX5 351 aa13.8□□□□□ -0.2
PNKP-230ENST00000638016 ASPHD1Q5U4P2 390 aa13.8□□□□□ -0.2
PNKP-230ENST00000638016 OR8U1Q8NH10 309 aa13.8□□□□□ -0.2
PNKP-230ENST00000638016 C4orf3Q8WVX3 66 aa13.8□□□□□ -0.2
PNKP-230ENST00000638016 FCGR1BQ92637 280 aa13.8□□□□□ -0.2
PNKP-230ENST00000638016 CHCHD6Q9BRQ6 235 aa13.8□□□□□ -0.2
PNKP-230ENST00000638016 ALX4Q9H161 411 aaPredicted RBP13.8□□□□□ -0.2
PNKP-230ENST00000638016 OR2D2Q9H210 308 aa13.8□□□□□ -0.2
PNKP-230ENST00000638016 DAPK2Q9UIK4 370 aa13.8□□□□□ -0.2
PNKP-230ENST00000638016 ZNF221Q9UK13 617 aa13.8□□□□□ -0.2
PNKP-230ENST00000638016 TRBV6-7A0A0A0MS04 114 aa13.79□□□□□ -0.2
PNKP-230ENST00000638016 A0A1W2PN81 502 aa13.79□□□□□ -0.2
PNKP-230ENST00000638016 NOTOA8MTQ0 251 aa13.79□□□□□ -0.2
PNKP-230ENST00000638016 IGLV1-40P01703 118 aa13.79□□□□□ -0.2
PNKP-230ENST00000638016 TFAP2AP05549 437 aa13.79□□□□□ -0.2
PNKP-230ENST00000638016 OR5H8P0DN80 308 aa13.79□□□□□ -0.2
PNKP-230ENST00000638016 SLC6A1P30531 599 aa13.79□□□□□ -0.2
PNKP-230ENST00000638016 CHRNA7P36544 502 aa13.79□□□□□ -0.2
PNKP-230ENST00000638016 GNB1P62873 340 aa13.79□□□□□ -0.2
PNKP-230ENST00000638016 ARFRP1Q13795 201 aa13.79□□□□□ -0.2
PNKP-230ENST00000638016 PSG5Q15238 335 aa13.79□□□□□ -0.2
PNKP-230ENST00000638016 NEDD8Q15843 81 aa13.79□□□□□ -0.2
PNKP-230ENST00000638016 LGALS14Q8TCE9 139 aa13.79□□□□□ -0.2
PNKP-230ENST00000638016 YTHDF1Q9BYJ9 559 aaKnown RBP13.79□□□□□ -0.2
PNKP-230ENST00000638016 SDHAF2Q9NX18 166 aa13.79□□□□□ -0.2
PNKP-230ENST00000638016 METTL1Q9UBP6 276 aaKnown RBP13.79□□□□□ -0.2
PNKP-230ENST00000638016 RRP15Q9Y3B9 282 aaKnown RBP13.79□□□□□ -0.2
PNKP-230ENST00000638016 J3QRK9 145 aa13.78□□□□□ -0.2
PNKP-230ENST00000638016 CA2P00918 260 aa13.78□□□□□ -0.2
PNKP-230ENST00000638016 MC5RP33032 325 aa13.78□□□□□ -0.2
PNKP-230ENST00000638016 SDC2P34741 201 aa13.78□□□□□ -0.2
PNKP-230ENST00000638016 SFXN4Q6P4A7 337 aa13.78□□□□□ -0.2
PNKP-230ENST00000638016 ZNF491Q8N8L2 437 aa13.78□□□□□ -0.2
PNKP-230ENST00000638016 MINDY2Q8NBR6 621 aa13.78□□□□□ -0.2
PNKP-230ENST00000638016 OR11H1Q8NG94 326 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms