RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 PSG7Q13046 419 aa11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 PRSS8Q16651 343 aa11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 ACSM6Q6P461 480 aa11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 CA5BP1Q8WTZ4 195 aa11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 RTL8AQ9BWD3 113 aa11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 OR5B21A6NL26 309 aa11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 ST8SIA5O15466 376 aa11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 TNFSF15O95150 251 aa11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 SP1P08047 785 aa11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 HNF1AP20823 631 aa11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 UBE2NP61088 152 aaKnown RBP11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 HBG1P69891 147 aa11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 HBG2P69892 147 aa11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 TMEM164Q5U3C3 297 aa11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 FBXW9Q5XUX1 488 aa11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 Q6ZR03 302 aa11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 OR4F5Q8NH21 305 aa11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 TAF15Q92804 592 aaKnown RBP eCLIP11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 MALSU1Q96EH3 234 aa11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 C5orf30Q96GV9 206 aa11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 OR4F4Q96R69 305 aa11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 RIMS4Q9H426 269 aaPredicted RBP11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 A0A1B0GW64 132 aa11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 SMCO3A2RU48 225 aa11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 C12orf77C9JDV5 145 aa11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 OR8G1Q15617 311 aa11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 TBC1D28Q2M2D7 210 aa11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 UBALD2Q8IYN6 164 aa11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 WDR61Q9GZS3 305 aaKnown RBP11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 LAMP3Q9UQV4 416 aa11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 A0A1W2PPQ1 181 aa11.8□□□□□ -0.52
CACNA1A-228ENST00000636610 GAMTQ14353 236 aa11.8□□□□□ -0.52
CACNA1A-228ENST00000636610 UNQ6494/PRO21346Q6UXR6 183 aa11.8□□□□□ -0.52
CACNA1A-228ENST00000636610 ZNF497Q6ZNH5 498 aa11.8□□□□□ -0.52
CACNA1A-228ENST00000636610 C1orf87Q8N0U7 546 aa11.8□□□□□ -0.52
CACNA1A-228ENST00000636610 OR51G1Q8NGK1 321 aa11.8□□□□□ -0.52
CACNA1A-228ENST00000636610 BCL2L2Q92843 193 aaPredicted RBP11.8□□□□□ -0.52
CACNA1A-228ENST00000636610 CLDN34H7C241 214 aa11.8□□□□□ -0.52
CACNA1A-228ENST00000636610 IFNL4K9M1U5 179 aa11.8□□□□□ -0.52
CACNA1A-228ENST00000636610 HAND1O96004 215 aa11.8□□□□□ -0.52
CACNA1A-228ENST00000636610 FGF7P21781 194 aa11.8□□□□□ -0.52
CACNA1A-228ENST00000636610 LRRC75BQ2VPJ9 315 aa11.8□□□□□ -0.52
CACNA1A-228ENST00000636610 SLC35E3Q7Z769 313 aa11.8□□□□□ -0.52
CACNA1A-228ENST00000636610 KDF1Q8NAX2 398 aaPredicted RBP11.8□□□□□ -0.52
CACNA1A-228ENST00000636610 LIN7CQ9NUP9 197 aaKnown RBP11.8□□□□□ -0.52
CACNA1A-228ENST00000636610 PSG11Q9UQ72 335 aa11.8□□□□□ -0.52
CACNA1A-228ENST00000636610 PTPRZ1P23471 2315 aaPredicted RBP11.8□□□□□ -0.52
CACNA1A-228ENST00000636610 ODAMA1E959 279 aa11.79□□□□□ -0.52
CACNA1A-228ENST00000636610 LRP5LA4QPB2 252 aa11.79□□□□□ -0.52
CACNA1A-228ENST00000636610 PGPEP1LA6NFU8 196 aa11.79□□□□□ -0.52
CACNA1A-228ENST00000636610 SH2D1BO14796 132 aa11.79□□□□□ -0.52
CACNA1A-228ENST00000636610 CEACAM1P13688 526 aa11.79□□□□□ -0.52
CACNA1A-228ENST00000636610 ACP1P24666 158 aa11.79□□□□□ -0.52
CACNA1A-228ENST00000636610 TNFRSF9Q07011 255 aa11.79□□□□□ -0.52
CACNA1A-228ENST00000636610 Q3ZCU0 254 aa11.79□□□□□ -0.52
CACNA1A-228ENST00000636610 C16orf82Q7Z2V1 217 aa11.79□□□□□ -0.52
CACNA1A-228ENST00000636610 TNCP24821 2201 aa11.79□□□□□ -0.52
CACNA1A-228ENST00000636610 ABCA1O95477 2261 aa11.79□□□□□ -0.52
CACNA1A-228ENST00000636610 DUXBA0A1W2PPF3 345 aa11.79□□□□□ -0.52
CACNA1A-228ENST00000636610 SMPD2O60906 423 aa11.79□□□□□ -0.52
CACNA1A-228ENST00000636610 TMEM37Q8WXS4 190 aa11.79□□□□□ -0.52
CACNA1A-228ENST00000636610 TRIB1Q96RU8 372 aa11.79□□□□□ -0.52
CACNA1A-228ENST00000636610 SDF2L1Q9HCN8 221 aa11.79□□□□□ -0.52
CACNA1A-228ENST00000636610 KCNIP1Q9NZI2 227 aa11.79□□□□□ -0.52
CACNA1A-228ENST00000636610 TRGV5A0A0B4J1U4 118 aa11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 A0A0U1RQK1 487 aa11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 SS18L1O75177 396 aaPredicted RBP11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 HBZP02008 142 aa11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 CHRNA7P36544 502 aa11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 CD81P60033 236 aa11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 FFAR4Q5NUL3 377 aa11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 NINJ1Q92982 152 aa11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 TRAV38-1A0A0B4J264 116 aa11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 C1QTNF9BB2RNN3 333 aa11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 PAGE4O60829 102 aa11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 RAC2P15153 192 aa11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 NRN1LQ496H8 165 aa11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 NCR3LG1Q68D85 454 aa11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 OR10G4Q8NGN3 311 aa11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 OR10G9Q8NGN4 311 aa11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 OR10G7Q8NGN6 311 aa11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 IL22RA2Q969J5 263 aa11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 GALMQ96C23 342 aa11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 SMDT1Q9H4I9 107 aa11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 CISD1Q9NZ45 108 aaKnown RBP11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 IGHV1-2P23083 117 aa11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 RNPS1Q15287 305 aaKnown RBP11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 TMEM41BQ5BJD5 291 aa11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 SP5Q6BEB4 398 aaPredicted RBP11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 C1QL4Q86Z23 238 aa11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 HIST3H2BBQ8N257 126 aa11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 KLF14Q8TD94 323 aaPredicted RBP11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 LEAP2Q969E1 77 aa11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 PCGF1Q9BSM1 259 aa11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 VAX2Q9UIW0 290 aa11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 MRPS18CQ9Y3D5 142 aaKnown RBP11.78□□□□□ -0.52
CACNA1A-228ENST00000636610 LINC00473A8K010 186 aa11.77□□□□□ -0.52
CACNA1A-228ENST00000636610 KLRC4-KLRK1H3BQV0 150 aa11.77□□□□□ -0.52
CACNA1A-228ENST00000636610 COX5BP10606 129 aa11.77□□□□□ -0.52
CACNA1A-228ENST00000636610 CCL11P51671 97 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms