RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 DNAH2Q9P225 4427 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 FLG2Q5D862 2391 aaPredicted RBP0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 TRAV6A0A075B6T7 132 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 IGHV3-49A0A0A0MS15 119 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 GOLGA8QA0A0J9YX86 632 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 GNG14A0A1W2PPG7 69 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 TMEM120BA0PK00 339 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 XKRY2A2RUG3 117 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 GOLGA8OA6NCC3 632 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 OR6C70A6NIJ9 312 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 OR5H1A6NKK0 313 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 CPSF4LA6NMK7 179 aaKnown RBP0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 LYRM9A8MSI8 78 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 CEACAM18A8MTB9 384 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 F5H5P2 479 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 GOLGA8NF8WBI6 632 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 H0YJW9 148 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 SMKR1H3BMG3 65 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 TRAPPC2LH3BP13 241 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 H3BUX3 64 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 M0R129 80 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 M0R233 179 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 M0R3G1 203 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 PGRMC1O00264 195 aaKnown RBP0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 UPK1AO00322 258 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 BPY2O14599 106 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 TP53I11O14683 189 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 SCAMP2O15127 329 aaKnown RBP0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 FADS1O60427 444 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 SCN2BO60939 215 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 WBP4O75554 376 aaKnown RBP0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 STK16O75716 305 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 CIB2O75838 187 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 OR2J3O76001 311 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 SEMA3DO95025 777 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 KCNK2O95069 426 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 SCELO95171 688 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 PSMG1O95456 288 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 CPSF4O95639 269 aaKnown RBP0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 PAHP00439 452 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 IGLV6-57P01721 117 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 IGHV1-46P01743 117 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 IGHV3-7P01780 117 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 SHBGP04278 402 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 GLAP06280 429 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 C8GP07360 202 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 SERPINA6P08185 405 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 OR4A8P0C604 315 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 CCDC172P0C7W6 258 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 OR12D1P0DN82 309 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 PRB4P10163 310 aaPredicted RBP0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 CD28P10747 220 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 SLC2A1P11166 492 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 CD79AP11912 226 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 GABRA1P14867 456 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 SLC25A16P16260 332 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 CCL3L1P16619 93 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 TCP1P17987 556 aaKnown RBP0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 PTMSP20962 102 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 CCNOP22674 350 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 CD24P25063 80 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 GTF2E2P29084 291 aaKnown RBP0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 RRM2P31350 389 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 GABRA3P34903 492 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 ANP32AP39687 249 aaKnown RBP0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 SLC1A1P43005 524 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 CRYBB2P43320 205 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 GPR4P46093 362 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 RPS5P46782 204 aaKnown RBP0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 SERPINB8P50452 374 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 XKP51811 444 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 SLC18A1P54219 525 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 AQP5P55064 265 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 HADHBP55084 474 aaKnown RBP0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 ATP5IP56385 69 aaPredicted RBP0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 OR2B6P58173 313 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 FGF12P61328 243 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 RPS11P62280 158 aaKnown RBP eCLIP0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 RPL23AP62750 156 aaKnown RBP0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 RPL23P62829 140 aaKnown RBP0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 TNFRSF9Q07011 255 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF616Q08AN1 781 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 C2orf80Q0P641 193 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 MERTKQ12866 999 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 SELENBP1Q13228 472 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 IL15RAQ13261 267 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 SKP2Q13309 424 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 SLC9A3R2Q15599 337 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 GABRA6Q16445 453 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 MRPL23Q16540 153 aaKnown RBP0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 TAF9Q16594 264 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 IMPG1Q17R60 797 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 MAJINQ3KP22 176 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 TMEM176BQ3YBM2 270 aaPredicted RBP0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 KRTAP13-2Q52LG2 175 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 KLHL12Q53G59 568 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 SPANXN3Q5MJ09 141 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 LDLRAD2Q5SZI1 272 aa0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 MRPL2Q5T653 305 aaKnown RBP0.56□□□□□ -2.32
SMARCB1-209ENST00000635578 STEAP4Q687X5 459 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms