RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 FAM90A23PA8MXZ1 464 aa9.77□□□□□ -0.85
LINC00339-206ENST00000634451 DYNC1I1O14576 645 aa9.77□□□□□ -0.85
LINC00339-206ENST00000634451 SLC25A17O43808 307 aa9.77□□□□□ -0.85
LINC00339-206ENST00000634451 DCKP27707 260 aa9.77□□□□□ -0.85
LINC00339-206ENST00000634451 CAPGP40121 348 aa9.77□□□□□ -0.85
LINC00339-206ENST00000634451 UNC119Q13432 240 aa9.77□□□□□ -0.85
LINC00339-206ENST00000634451 FXYD3Q14802 87 aa9.77□□□□□ -0.85
LINC00339-206ENST00000634451 YIF1BQ5BJH7 314 aa9.77□□□□□ -0.85
LINC00339-206ENST00000634451 LY6G6FQ5SQ64 297 aa9.77□□□□□ -0.85
LINC00339-206ENST00000634451 POC5Q8NA72 575 aa9.77□□□□□ -0.85
LINC00339-206ENST00000634451 C11orf54Q9H0W9 315 aaPredicted RBP9.77□□□□□ -0.85
LINC00339-206ENST00000634451 DIMT1Q9UNQ2 313 aaKnown RBP9.77□□□□□ -0.85
LINC00339-206ENST00000634451 OR5H14A6NHG9 310 aa9.76□□□□□ -0.85
LINC00339-206ENST00000634451 RAB29O14966 203 aa9.76□□□□□ -0.85
LINC00339-206ENST00000634451 BRI3O95415 125 aa9.76□□□□□ -0.85
LINC00339-206ENST00000634451 NAPSAO96009 420 aa9.76□□□□□ -0.85
LINC00339-206ENST00000634451 IGLV2-23P01705 113 aa9.76□□□□□ -0.85
LINC00339-206ENST00000634451 TFAP2AP05549 437 aa9.76□□□□□ -0.85
LINC00339-206ENST00000634451 TMEM267Q0VDI3 215 aaPredicted RBP9.76□□□□□ -0.85
LINC00339-206ENST00000634451 MRGPRG-AS1Q2M3A8 158 aa9.76□□□□□ -0.85
LINC00339-206ENST00000634451 PYHIN1Q6K0P9 492 aa9.76□□□□□ -0.85
LINC00339-206ENST00000634451 FAM71F2Q6NXP2 309 aa9.76□□□□□ -0.85
LINC00339-206ENST00000634451 ZNF880Q6PDB4 577 aa9.76□□□□□ -0.85
LINC00339-206ENST00000634451 ZNF562Q6V9R5 426 aa9.76□□□□□ -0.85
LINC00339-206ENST00000634451 LINC00322Q6ZN03 302 aaPredicted RBP9.76□□□□□ -0.85
LINC00339-206ENST00000634451 ZNF554Q86TJ5 538 aa9.76□□□□□ -0.85
LINC00339-206ENST00000634451 C5orf30Q96GV9 206 aa9.76□□□□□ -0.85
LINC00339-206ENST00000634451 TUBA4BQ9H853 241 aa9.76□□□□□ -0.85
LINC00339-206ENST00000634451 RANGRFQ9HD47 186 aaPredicted RBP9.76□□□□□ -0.85
LINC00339-206ENST00000634451 PIPOXQ9P0Z9 390 aa9.76□□□□□ -0.85
LINC00339-206ENST00000634451 IGKV1-6A0A0C4DH72 117 aa9.75□□□□□ -0.85
LINC00339-206ENST00000634451 C13orf42A0A1B0GVH6 325 aa9.75□□□□□ -0.85
LINC00339-206ENST00000634451 RBMY1BA6NDE4 496 aaKnown RBP9.75□□□□□ -0.85
LINC00339-206ENST00000634451 RBMY1EA6NEQ0 496 aaKnown RBP9.75□□□□□ -0.85
LINC00339-206ENST00000634451 JTBO76095 146 aa9.75□□□□□ -0.85
LINC00339-206ENST00000634451 GLAP06280 429 aa9.75□□□□□ -0.85
LINC00339-206ENST00000634451 CD7P09564 240 aa9.75□□□□□ -0.85
LINC00339-206ENST00000634451 SCTP09683 121 aa9.75□□□□□ -0.85
LINC00339-206ENST00000634451 CD3GP09693 182 aa9.75□□□□□ -0.85
LINC00339-206ENST00000634451 RBMY1DP0C7P1 496 aaKnown RBP9.75□□□□□ -0.85
LINC00339-206ENST00000634451 CPEP16870 476 aa9.75□□□□□ -0.85
LINC00339-206ENST00000634451 MYL12AP19105 171 aa9.75□□□□□ -0.85
LINC00339-206ENST00000634451 RPS16P62249 146 aaKnown RBP9.75□□□□□ -0.85
LINC00339-206ENST00000634451 RPS27AP62979 156 aaKnown RBP9.75□□□□□ -0.85
LINC00339-206ENST00000634451 LAIR2Q6ISS4 152 aa9.75□□□□□ -0.85
LINC00339-206ENST00000634451 LRRTM1Q86UE6 522 aa9.75□□□□□ -0.85
LINC00339-206ENST00000634451 DEFB125Q8N687 156 aa9.75□□□□□ -0.85
LINC00339-206ENST00000634451 GGHQ92820 318 aa9.75□□□□□ -0.85
LINC00339-206ENST00000634451 C9orf16Q9BUW7 83 aa9.75□□□□□ -0.85
LINC00339-206ENST00000634451 SLA2Q9H6Q3 261 aa9.75□□□□□ -0.85
LINC00339-206ENST00000634451 CHMP1AQ9HD42 196 aaPredicted RBP9.75□□□□□ -0.85
LINC00339-206ENST00000634451 FAM53CQ9NYF3 392 aa9.75□□□□□ -0.85
LINC00339-206ENST00000634451 STEAP1Q9UHE8 339 aa9.75□□□□□ -0.85
LINC00339-206ENST00000634451 AK3Q9UIJ7 227 aa9.75□□□□□ -0.85
LINC00339-206ENST00000634451 EXOSC1Q9Y3B2 195 aaKnown RBP9.75□□□□□ -0.85
LINC00339-206ENST00000634451 CEPT1Q9Y6K0 416 aa9.75□□□□□ -0.85
LINC00339-206ENST00000634451 SOCS1O15524 211 aa9.74□□□□□ -0.85
LINC00339-206ENST00000634451 PRH1P02810 166 aa9.74□□□□□ -0.85
LINC00339-206ENST00000634451 CELP19835 753 aa9.74□□□□□ -0.85
LINC00339-206ENST00000634451 ZP3P21754 424 aa9.74□□□□□ -0.85
LINC00339-206ENST00000634451 CEACAM6P40199 344 aa9.74□□□□□ -0.85
LINC00339-206ENST00000634451 RASSF2P50749 326 aa9.74□□□□□ -0.85
LINC00339-206ENST00000634451 TMEM80Q96HE8 168 aa9.74□□□□□ -0.85
LINC00339-206ENST00000634451 NEDD4LQ96PU5 975 aa9.74□□□□□ -0.85
LINC00339-206ENST00000634451 CHCHD3Q9NX63 227 aaKnown RBP9.74□□□□□ -0.85
LINC00339-206ENST00000634451 ABRACLQ9P1F3 81 aa9.74□□□□□ -0.85
LINC00339-206ENST00000634451 HERC2O95714 4834 aa9.73□□□□□ -0.85
LINC00339-206ENST00000634451 SLC22A1O15245 554 aa9.73□□□□□ -0.85
LINC00339-206ENST00000634451 RBBP9O75884 186 aa9.73□□□□□ -0.85
LINC00339-206ENST00000634451 IFNA6P05013 189 aa9.73□□□□□ -0.85
LINC00339-206ENST00000634451 CRYGBP07316 175 aa9.73□□□□□ -0.85
LINC00339-206ENST00000634451 MC5RP33032 325 aa9.73□□□□□ -0.85
LINC00339-206ENST00000634451 MECP2P51608 486 aaKnown RBP9.73□□□□□ -0.85
LINC00339-206ENST00000634451 CD81P60033 236 aa9.73□□□□□ -0.85
LINC00339-206ENST00000634451 QRFPP83859 136 aa9.73□□□□□ -0.85
LINC00339-206ENST00000634451 ST3GAL4Q11206 333 aa9.73□□□□□ -0.85
LINC00339-206ENST00000634451 CD300EQ496F6 205 aaPredicted RBP9.73□□□□□ -0.85
LINC00339-206ENST00000634451 BVESQ8NE79 360 aa9.73□□□□□ -0.85
LINC00339-206ENST00000634451 TMEM59Q9BXS4 323 aa9.73□□□□□ -0.85
LINC00339-206ENST00000634451 S100A14Q9HCY8 104 aa9.73□□□□□ -0.85
LINC00339-206ENST00000634451 NKX1-2Q9UD57 310 aaPredicted RBP9.73□□□□□ -0.85
LINC00339-206ENST00000634451 SRRM4A7MD48 611 aaKnown RBP9.72□□□□□ -0.85
LINC00339-206ENST00000634451 H0Y980 276 aa9.72□□□□□ -0.85
LINC00339-206ENST00000634451 M0R1X1 148 aa9.72□□□□□ -0.85
LINC00339-206ENST00000634451 BMPR1BO00238 502 aa9.72□□□□□ -0.85
LINC00339-206ENST00000634451 ATP5HO75947 161 aa9.72□□□□□ -0.85
LINC00339-206ENST00000634451 HLA-DRB3P79483 266 aa9.72□□□□□ -0.85
LINC00339-206ENST00000634451 PLA2G7Q13093 441 aa9.72□□□□□ -0.85
LINC00339-206ENST00000634451 P2RY14Q15391 338 aa9.72□□□□□ -0.85
LINC00339-206ENST00000634451 ZNF343Q6P1L6 599 aa9.72□□□□□ -0.85
LINC00339-206ENST00000634451 ZFP1Q6P2D0 407 aa9.72□□□□□ -0.85
LINC00339-206ENST00000634451 C19orf35Q6ZS72 473 aa9.72□□□□□ -0.85
LINC00339-206ENST00000634451 GTSCR1Q86UQ5 136 aa9.72□□□□□ -0.85
LINC00339-206ENST00000634451 CDH26Q8IXH8 852 aa9.72□□□□□ -0.85
LINC00339-206ENST00000634451 PQLC1Q8N2U9 271 aa9.72□□□□□ -0.85
LINC00339-206ENST00000634451 NKAIN3Q8N8D7 197 aa9.72□□□□□ -0.85
LINC00339-206ENST00000634451 GFI1Q99684 422 aa9.72□□□□□ -0.85
LINC00339-206ENST00000634451 UQCC2Q9BRT2 126 aa9.72□□□□□ -0.85
LINC00339-206ENST00000634451 TM2D1Q9BX74 207 aa9.72□□□□□ -0.85
LINC00339-206ENST00000634451 TINAGL1Q9GZM7 467 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms