RNA–Protein interactions for RNA: ENST00000634435.1

SMARCA2-223, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-223	ENST00000634435	ZNF286A	Q9HBT8	521 aa		5.01	□□□□□ -1.61
SMARCA2-223	ENST00000634435	MTCH1	Q9NZJ7	389 aa		5.01	□□□□□ -1.61
SMARCA2-223	ENST00000634435	SLC7A11	Q9UPY5	501 aa		5.01	□□□□□ -1.61
SMARCA2-223	ENST00000634435	ZNF256	Q9Y2P7	627 aa	Predicted RBP	5.01	□□□□□ -1.61
SMARCA2-223	ENST00000634435	SMAD5-AS1	Q9Y6J3	95 aa		5.01	□□□□□ -1.61
SMARCA2-223	ENST00000634435	DHRS7C	A6NNS2	312 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	SRRM4	A7MD48	611 aa	Known RBP	5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	OOSP1	A8MZH6	123 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	BUB1B-PAK6	H3BSN5	160 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	SIRPB1	O00241	398 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	ARPC1B	O15143	372 aa	Known RBP	5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	IGLV1-47	P01700	117 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	S100A6	P06703	90 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	PRSS1	P07477	247 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	ATP6V1B2	P21281	511 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	PTGFR	P43088	359 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	MAGEA2	P43356	314 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	POU3F4	P49335	361 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	HCCS	P53701	268 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	PRRX1	P54821	245 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	ERVFC1-1	P60608	527 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	CTAG1A	P78358	180 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	GINS1	Q14691	196 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	OR2T5	Q6IEZ7	315 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	FAM159A	Q6UWV7	190 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	PLEKHG7	Q6ZR37	379 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	SPATA24	Q86W54	205 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	SBSPON	Q8IVN8	264 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435		Q8IYB0	196 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	ENTHD1	Q8IYW4	607 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	ZNF679	Q8IYX0	411 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	PGAM4	Q8N0Y7	254 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	STPG2	Q8N412	459 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	C5orf56	Q8N8D9	126 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	OR4D10	Q8NGI6	311 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	OR4D6	Q8NGJ1	314 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	OR2T29	Q8NH02	315 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	ASB17	Q8WXJ9	295 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	S100A14	Q9HCY8	104 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	RBFOX1	Q9NWB1	397 aa	Known RBP	5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	HHLA2	Q9UM44	414 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	COPS3	Q9UNS2	423 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	TMEM14A	Q9Y6G1	99 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435		V9GYS6	101 aa		5	□□□□□ -1.61
SMARCA2-223	ENST00000634435	IGKV1-27	A0A075B6S5	117 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	FUOM	A2VDF0	154 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435		H3BSH0	61 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	FGF16	O43320	207 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	GATB	O75879	557 aa	Known RBP	4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	DIRAS3	O95661	229 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	CYB5A	P00167	134 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	IGKV1D-33	P01593	117 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	IGKV1-33	P01594	117 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	HMGN1	P05114	100 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	CALCB	P10092	127 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	PRKACA	P17612	351 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	NFYB	P25208	207 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	CD34	P28906	385 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	ERP29	P30040	261 aa	Known RBP	4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	PRDX6	P30041	224 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	GLP1R	P43220	463 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	BNIP1	Q12981	228 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	PDZK1IP1	Q13113	114 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	APOF	Q13790	326 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	KCTD21	Q4G0X4	260 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	SPIN3	Q5JUX0	258 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	ZNF322	Q6U7Q0	402 aa	Predicted RBP	4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	ADAMTSL5	Q6ZMM2	481 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	SMIM29	Q86T20	159 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	DRAM1	Q8N682	238 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	MINDY2	Q8NBR6	621 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	CCDC197	Q8NCU1	140 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	THRSP	Q92748	146 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	ISOC1	Q96CN7	298 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	MRPL53	Q96EL3	112 aa	Known RBP	4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	BORCS8	Q96FH0	119 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	CNN2	Q99439	309 aa	Known RBP	4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	BCL7B	Q9BQE9	202 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	FUNDC2	Q9BWH2	189 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	CHST5	Q9GZS9	411 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	EXOSC4	Q9NPD3	245 aa	Known RBP	4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	OR52A1	Q9UKL2	312 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435		R4GMQ9	66 aa		4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435	DYNC2H1	Q8NCM8	4307 aa	Known RBP	4.99	□□□□□ -1.61
SMARCA2-223	ENST00000634435		A0A1B0GTI1	187 aa		4.98	□□□□□ -1.61
SMARCA2-223	ENST00000634435	ODAM	A1E959	279 aa		4.98	□□□□□ -1.61
SMARCA2-223	ENST00000634435	XKRY2	A2RUG3	117 aa		4.98	□□□□□ -1.61
SMARCA2-223	ENST00000634435	NCBP2L	A6PVI3	153 aa	Known RBP	4.98	□□□□□ -1.61
SMARCA2-223	ENST00000634435	LY6L	H3BQJ8	138 aa		4.98	□□□□□ -1.61
SMARCA2-223	ENST00000634435	ENTPD6	O75354	484 aa		4.98	□□□□□ -1.61
SMARCA2-223	ENST00000634435	SRSF10	O75494	262 aa	Known RBP	4.98	□□□□□ -1.61
SMARCA2-223	ENST00000634435	OR2H2	O95918	312 aa		4.98	□□□□□ -1.61
SMARCA2-223	ENST00000634435	IGHV3-7	P01780	117 aa		4.98	□□□□□ -1.61
SMARCA2-223	ENST00000634435	IGHG2	P01859	326 aa		4.98	□□□□□ -1.61
SMARCA2-223	ENST00000634435	ZNF44	P15621	663 aa		4.98	□□□□□ -1.61
SMARCA2-223	ENST00000634435	BCL3	P20749	454 aa		4.98	□□□□□ -1.61
SMARCA2-223	ENST00000634435	GAL	P22466	123 aa		4.98	□□□□□ -1.61
SMARCA2-223	ENST00000634435	SLC2A5	P22732	501 aa		4.98	□□□□□ -1.61
SMARCA2-223	ENST00000634435	CDC42	P60953	191 aa		4.98	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms