RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 ZNF182P17025 639 aaPredicted RBP12.31□□□□□ -0.44
SNRNP48-203ENST00000634363 Q6ZS49 121 aa12.31□□□□□ -0.44
SNRNP48-203ENST00000634363 ZNF329Q86UD4 541 aa12.31□□□□□ -0.44
SNRNP48-203ENST00000634363 LINC00482Q8N8I6 264 aa12.31□□□□□ -0.44
SNRNP48-203ENST00000634363 ST6GALNAC6Q969X2 333 aa12.31□□□□□ -0.44
SNRNP48-203ENST00000634363 CMTM3Q96MX0 182 aa12.31□□□□□ -0.44
SNRNP48-203ENST00000634363 WWC2-AS2Q96NR7 200 aa12.31□□□□□ -0.44
SNRNP48-203ENST00000634363 GINS4Q9BRT9 223 aa12.31□□□□□ -0.44
SNRNP48-203ENST00000634363 CABLES2Q9BTV7 478 aa12.31□□□□□ -0.44
SNRNP48-203ENST00000634363 AUNIPQ9H7T9 357 aa12.31□□□□□ -0.44
SNRNP48-203ENST00000634363 SAA2-SAA4A0A096LPE2 208 aa12.3□□□□□ -0.44
SNRNP48-203ENST00000634363 IGKV1-6A0A0C4DH72 117 aa12.3□□□□□ -0.44
SNRNP48-203ENST00000634363 SMIM31A0A1B0GVY4 71 aa12.3□□□□□ -0.44
SNRNP48-203ENST00000634363 PSMB11A5LHX3 300 aa12.3□□□□□ -0.44
SNRNP48-203ENST00000634363 ITGB1BP1O14713 200 aa12.3□□□□□ -0.44
SNRNP48-203ENST00000634363 LANCL1O43813 399 aa12.3□□□□□ -0.44
SNRNP48-203ENST00000634363 APOA1P02647 267 aa12.3□□□□□ -0.44
SNRNP48-203ENST00000634363 EIF4EP06730 217 aaKnown RBP12.3□□□□□ -0.44
SNRNP48-203ENST00000634363 SAA2P0DJI9 122 aaPredicted RBP12.3□□□□□ -0.44
SNRNP48-203ENST00000634363 EGFEM1PQ0D2K5 195 aa12.3□□□□□ -0.44
SNRNP48-203ENST00000634363 SPCS2Q15005 226 aa12.3□□□□□ -0.44
SNRNP48-203ENST00000634363 IGSF11Q5DX21 431 aa12.3□□□□□ -0.44
SNRNP48-203ENST00000634363 THNSL2Q86YJ6 484 aa12.3□□□□□ -0.44
SNRNP48-203ENST00000634363 MRPL41Q8IXM3 137 aaKnown RBP12.3□□□□□ -0.44
SNRNP48-203ENST00000634363 PARP12Q9H0J9 701 aaKnown RBP12.3□□□□□ -0.44
SNRNP48-203ENST00000634363 IFI27L2Q9H2X8 130 aa12.3□□□□□ -0.44
SNRNP48-203ENST00000634363 GHITMQ9H3K2 345 aa12.3□□□□□ -0.44
SNRNP48-203ENST00000634363 RDH8Q9NYR8 311 aa12.3□□□□□ -0.44
SNRNP48-203ENST00000634363 TRBV6-7A0A0A0MS04 114 aa12.29□□□□□ -0.44
SNRNP48-203ENST00000634363 IGHV3-72A0A0B4J1Y9 119 aa12.29□□□□□ -0.44
SNRNP48-203ENST00000634363 CCDC160A6NGH7 325 aa12.29□□□□□ -0.44
SNRNP48-203ENST00000634363 RAB29O14966 203 aa12.29□□□□□ -0.44
SNRNP48-203ENST00000634363 SSX5O60225 188 aa12.29□□□□□ -0.44
SNRNP48-203ENST00000634363 HPGDSO60760 199 aa12.29□□□□□ -0.44
SNRNP48-203ENST00000634363 IGKV1D-33P01593 117 aa12.29□□□□□ -0.44
SNRNP48-203ENST00000634363 IGKV1-33P01594 117 aa12.29□□□□□ -0.44
SNRNP48-203ENST00000634363 CTXN2P0C2S0 81 aa12.29□□□□□ -0.44
SNRNP48-203ENST00000634363 TMEM11P17152 192 aa12.29□□□□□ -0.44
SNRNP48-203ENST00000634363 TAS2R20P59543 309 aa12.29□□□□□ -0.44
SNRNP48-203ENST00000634363 FAM71F2Q6NXP2 309 aa12.29□□□□□ -0.44
SNRNP48-203ENST00000634363 ODF3L1Q8IXM7 274 aa12.29□□□□□ -0.44
SNRNP48-203ENST00000634363 ISOC1Q96CN7 298 aa12.29□□□□□ -0.44
SNRNP48-203ENST00000634363 S1PR3Q99500 378 aa12.29□□□□□ -0.44
SNRNP48-203ENST00000634363 B9D2Q9BPU9 175 aa12.29□□□□□ -0.44
SNRNP48-203ENST00000634363 GPR61Q9BZJ8 451 aa12.29□□□□□ -0.44
SNRNP48-203ENST00000634363 C11orf54Q9H0W9 315 aaPredicted RBP12.29□□□□□ -0.44
SNRNP48-203ENST00000634363 ZNF221Q9UK13 617 aa12.29□□□□□ -0.44
SNRNP48-203ENST00000634363 IGKV1D-8A0A087WSZ0 117 aa12.28□□□□□ -0.44
SNRNP48-203ENST00000634363 FAM90A9PA6NNJ1 464 aa12.28□□□□□ -0.44
SNRNP48-203ENST00000634363 NUDT19A8MXV4 375 aa12.28□□□□□ -0.44
SNRNP48-203ENST00000634363 FAM25AB3EWG3 89 aa12.28□□□□□ -0.44
SNRNP48-203ENST00000634363 FAM25CB3EWG5 89 aa12.28□□□□□ -0.44
SNRNP48-203ENST00000634363 FAM25GB3EWG6 89 aa12.28□□□□□ -0.44
SNRNP48-203ENST00000634363 M0QZK8 103 aa12.28□□□□□ -0.44
SNRNP48-203ENST00000634363 CBX5P45973 191 aa12.28□□□□□ -0.44
SNRNP48-203ENST00000634363 OR3A3P47888 321 aa12.28□□□□□ -0.44
SNRNP48-203ENST00000634363 ARPC4P59998 168 aa12.28□□□□□ -0.44
SNRNP48-203ENST00000634363 ZNF833PQ6ZTB9 187 aa12.28□□□□□ -0.44
SNRNP48-203ENST00000634363 C18orf65Q6ZTR6 163 aa12.28□□□□□ -0.44
SNRNP48-203ENST00000634363 ABHD14BQ96IU4 210 aa12.28□□□□□ -0.44
SNRNP48-203ENST00000634363 MRPL20Q9BYC9 149 aaKnown RBP12.28□□□□□ -0.44
SNRNP48-203ENST00000634363 IFT46Q9NQC8 304 aa12.28□□□□□ -0.44
SNRNP48-203ENST00000634363 MOB4Q9Y3A3 225 aa12.28□□□□□ -0.44
SNRNP48-203ENST00000634363 RBM7Q9Y580 266 aaKnown RBP12.28□□□□□ -0.44
SNRNP48-203ENST00000634363 H3BMQ9 156 aa12.27□□□□□ -0.45
SNRNP48-203ENST00000634363 PTHLHP12272 177 aa12.27□□□□□ -0.45
SNRNP48-203ENST00000634363 ELK1P19419 428 aa12.27□□□□□ -0.45
SNRNP48-203ENST00000634363 CD1BP29016 333 aa12.27□□□□□ -0.45
SNRNP48-203ENST00000634363 GPR12P47775 334 aa12.27□□□□□ -0.45
SNRNP48-203ENST00000634363 THBS3P49746 956 aa12.27□□□□□ -0.45
SNRNP48-203ENST00000634363 LSAMPQ13449 338 aa12.27□□□□□ -0.45
SNRNP48-203ENST00000634363 HNF4GQ14541 408 aa12.27□□□□□ -0.45
SNRNP48-203ENST00000634363 CNIH2Q6PI25 160 aa12.27□□□□□ -0.45
SNRNP48-203ENST00000634363 ETV3LQ6ZN32 361 aa12.27□□□□□ -0.45
SNRNP48-203ENST00000634363 C8orf86Q6ZUL3 223 aa12.27□□□□□ -0.45
SNRNP48-203ENST00000634363 BEST4Q8NFU0 473 aa12.27□□□□□ -0.45
SNRNP48-203ENST00000634363 OR2T10Q8NGZ9 312 aa12.27□□□□□ -0.45
SNRNP48-203ENST00000634363 NOL4LQ96MY1 436 aaPredicted RBP12.27□□□□□ -0.45
SNRNP48-203ENST00000634363 AGMATQ9BSE5 352 aa12.27□□□□□ -0.45
SNRNP48-203ENST00000634363 TOLLIPQ9H0E2 274 aa12.27□□□□□ -0.45
SNRNP48-203ENST00000634363 CCDC59Q9P031 241 aaKnown RBP12.27□□□□□ -0.45
SNRNP48-203ENST00000634363 ANXA10Q9UJ72 324 aa12.27□□□□□ -0.45
SNRNP48-203ENST00000634363 LINC00527Q9UJ94 153 aa12.27□□□□□ -0.45
SNRNP48-203ENST00000634363 MRPS7Q9Y2R9 242 aaKnown RBP12.27□□□□□ -0.45
SNRNP48-203ENST00000634363 MEIS3P1A6NDR6 274 aa12.26□□□□□ -0.45
SNRNP48-203ENST00000634363 RGS5O15539 181 aa12.26□□□□□ -0.45
SNRNP48-203ENST00000634363 RPL23AP62750 156 aaKnown RBP12.26□□□□□ -0.45
SNRNP48-203ENST00000634363 RPL39P5Q59GN2 51 aa12.26□□□□□ -0.45
SNRNP48-203ENST00000634363 HOGA1Q86XE5 327 aa12.26□□□□□ -0.45
SNRNP48-203ENST00000634363 GVQW1Q8N7I0 195 aa12.26□□□□□ -0.45
SNRNP48-203ENST00000634363 EAF1Q96JC9 268 aaPredicted RBP12.26□□□□□ -0.45
SNRNP48-203ENST00000634363 NABP2Q9BQ15 211 aa12.26□□□□□ -0.45
SNRNP48-203ENST00000634363 MCRIP2Q9BUT9 160 aaKnown RBP12.26□□□□□ -0.45
SNRNP48-203ENST00000634363 OR2D2Q9H210 308 aa12.26□□□□□ -0.45
SNRNP48-203ENST00000634363 ADAM30Q9UKF2 790 aa12.26□□□□□ -0.45
SNRNP48-203ENST00000634363 RNF150Q9ULK6 438 aa12.26□□□□□ -0.45
SNRNP48-203ENST00000634363 CEPT1Q9Y6K0 416 aa12.26□□□□□ -0.45
SNRNP48-203ENST00000634363 COL7A1Q02388 2944 aa12.26□□□□□ -0.45
SNRNP48-203ENST00000634363 MOSP00540 346 aa12.25□□□□□ -0.45
SNRNP48-203ENST00000634363 OR8U9P0C7N5 309 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms