RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 DRAM1Q8N682 238 aa11.83□□□□□ -0.52
PNKP-221ENST00000627317 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.83□□□□□ -0.52
PNKP-221ENST00000627317 OR56B4Q8NH76 319 aa11.83□□□□□ -0.52
PNKP-221ENST00000627317 TAF15Q92804 592 aaKnown RBP eCLIP11.83□□□□□ -0.52
PNKP-221ENST00000627317 AGMATQ9BSE5 352 aa11.83□□□□□ -0.52
PNKP-221ENST00000627317 MRPL20Q9BYC9 149 aaKnown RBP11.83□□□□□ -0.52
PNKP-221ENST00000627317 TAS2R8Q9NYW2 309 aa11.83□□□□□ -0.52
PNKP-221ENST00000627317 M0QYG6 137 aa11.82□□□□□ -0.52
PNKP-221ENST00000627317 PPYP01298 95 aa11.82□□□□□ -0.52
PNKP-221ENST00000627317 CD3DP04234 171 aa11.82□□□□□ -0.52
PNKP-221ENST00000627317 IFNA6P05013 189 aa11.82□□□□□ -0.52
PNKP-221ENST00000627317 CSF1P09603 554 aa11.82□□□□□ -0.52
PNKP-221ENST00000627317 RAB13P51153 203 aa11.82□□□□□ -0.52
PNKP-221ENST00000627317 FXYD4P59646 89 aa11.82□□□□□ -0.52
PNKP-221ENST00000627317 TSPAN5P62079 268 aa11.82□□□□□ -0.52
PNKP-221ENST00000627317 RPL39P5Q59GN2 51 aa11.82□□□□□ -0.52
PNKP-221ENST00000627317 C16orf87Q6PH81 154 aa11.82□□□□□ -0.52
PNKP-221ENST00000627317 OVCH2Q7RTZ1 564 aa11.82□□□□□ -0.52
PNKP-221ENST00000627317 Q8N402 240 aa11.82□□□□□ -0.52
PNKP-221ENST00000627317 TMEM229BQ8NBD8 167 aa11.82□□□□□ -0.52
PNKP-221ENST00000627317 CAPSLQ8WWF8 208 aa11.82□□□□□ -0.52
PNKP-221ENST00000627317 CHIAQ9BZP6 476 aa11.82□□□□□ -0.52
PNKP-221ENST00000627317 ZNF107Q9UII5 783 aaPredicted RBP11.82□□□□□ -0.52
PNKP-221ENST00000627317 PITPNC1Q9UKF7 332 aa11.82□□□□□ -0.52
PNKP-221ENST00000627317 RBMX2Q9Y388 322 aaKnown RBP11.82□□□□□ -0.52
PNKP-221ENST00000627317 MGAM2Q2M2H8 2515 aa11.81□□□□□ -0.52
PNKP-221ENST00000627317 IGHV3-72A0A0B4J1Y9 119 aa11.81□□□□□ -0.52
PNKP-221ENST00000627317 M0R1X1 148 aa11.81□□□□□ -0.52
PNKP-221ENST00000627317 SLC22A5O76082 557 aa11.81□□□□□ -0.52
PNKP-221ENST00000627317 CD24P25063 80 aa11.81□□□□□ -0.52
PNKP-221ENST00000627317 FOXL1Q12952 345 aa11.81□□□□□ -0.52
PNKP-221ENST00000627317 HES1Q14469 280 aa11.81□□□□□ -0.52
PNKP-221ENST00000627317 VAX1Q5SQQ9 334 aa11.81□□□□□ -0.52
PNKP-221ENST00000627317 STEAP1BQ6NZ63 245 aa11.81□□□□□ -0.52
PNKP-221ENST00000627317 LINC00299Q6ZSB3 139 aa11.81□□□□□ -0.52
PNKP-221ENST00000627317 TMEM17Q86X19 198 aa11.81□□□□□ -0.52
PNKP-221ENST00000627317 OR6F1Q8NGZ6 308 aa11.81□□□□□ -0.52
PNKP-221ENST00000627317 SECTM1Q8WVN6 248 aa11.81□□□□□ -0.52
PNKP-221ENST00000627317 GIMAP1Q8WWP7 306 aa11.81□□□□□ -0.52
PNKP-221ENST00000627317 CFHR4Q92496 578 aa11.81□□□□□ -0.52
PNKP-221ENST00000627317 ZNF2Q9BSG1 426 aaPredicted RBP11.81□□□□□ -0.52
PNKP-221ENST00000627317 SRRQ9GZT4 340 aa11.81□□□□□ -0.52
PNKP-221ENST00000627317 TCF19Q9Y242 345 aa11.81□□□□□ -0.52
PNKP-221ENST00000627317 MEGF8Q7Z7M0 2845 aa11.81□□□□□ -0.52
PNKP-221ENST00000627317 TRRAPQ9Y4A5 3859 aa11.8□□□□□ -0.52
PNKP-221ENST00000627317 IGKV1D-13A0A0B4J2D9 117 aa11.8□□□□□ -0.52
PNKP-221ENST00000627317 HAX1O00165 279 aa11.8□□□□□ -0.52
PNKP-221ENST00000627317 GPR137BO60478 399 aa11.8□□□□□ -0.52
PNKP-221ENST00000627317 RAB3DO95716 219 aa11.8□□□□□ -0.52
PNKP-221ENST00000627317 SNRNP70P08621 437 aaKnown RBP11.8□□□□□ -0.52
PNKP-221ENST00000627317 FAM106CPP0CH98 169 aa11.8□□□□□ -0.52
PNKP-221ENST00000627317 IGKV1-13P0DP09 117 aa11.8□□□□□ -0.52
PNKP-221ENST00000627317 RELBQ01201 579 aa11.8□□□□□ -0.52
PNKP-221ENST00000627317 LSAMPQ13449 338 aa11.8□□□□□ -0.52
PNKP-221ENST00000627317 LIAT1Q6ZQX7 453 aa11.8□□□□□ -0.52
PNKP-221ENST00000627317 TMEM219Q86XT9 240 aa11.8□□□□□ -0.52
PNKP-221ENST00000627317 ZNF645Q8N7E2 425 aa11.8□□□□□ -0.52
PNKP-221ENST00000627317 PIFOQ8TCI5 191 aa11.8□□□□□ -0.52
PNKP-221ENST00000627317 NABP2Q9BQ15 211 aa11.8□□□□□ -0.52
PNKP-221ENST00000627317 ZNF251Q9BRH9 671 aa11.8□□□□□ -0.52
PNKP-221ENST00000627317 THAP7Q9BT49 309 aaPredicted RBP11.8□□□□□ -0.52
PNKP-221ENST00000627317 ZNF747Q9BV97 191 aa11.8□□□□□ -0.52
PNKP-221ENST00000627317 TINAGL1Q9GZM7 467 aaPredicted RBP11.8□□□□□ -0.52
PNKP-221ENST00000627317 SLC5A7Q9GZV3 580 aa11.8□□□□□ -0.52
PNKP-221ENST00000627317 RAB18Q9NP72 206 aa11.8□□□□□ -0.52
PNKP-221ENST00000627317 SDHAF2Q9NX18 166 aa11.8□□□□□ -0.52
PNKP-221ENST00000627317 ANKRD20A5PA0PJZ0 165 aa11.79□□□□□ -0.52
PNKP-221ENST00000627317 A6NDX4 124 aa11.79□□□□□ -0.52
PNKP-221ENST00000627317 FAM181BA6NEQ2 426 aa11.79□□□□□ -0.52
PNKP-221ENST00000627317 IGKV1D-33P01593 117 aa11.79□□□□□ -0.52
PNKP-221ENST00000627317 IGKV1-33P01594 117 aa11.79□□□□□ -0.52
PNKP-221ENST00000627317 CD74P04233 296 aa11.79□□□□□ -0.52
PNKP-221ENST00000627317 AKAIN1P0CW23 69 aa11.79□□□□□ -0.52
PNKP-221ENST00000627317 CD1BP29016 333 aa11.79□□□□□ -0.52
PNKP-221ENST00000627317 AP3S2P59780 193 aa11.79□□□□□ -0.52
PNKP-221ENST00000627317 ZNF45Q02386 682 aa11.79□□□□□ -0.52
PNKP-221ENST00000627317 HABP2Q14520 560 aaPredicted RBP11.79□□□□□ -0.52
PNKP-221ENST00000627317 MEF2DQ14814 521 aa11.79□□□□□ -0.52
PNKP-221ENST00000627317 TRIQKQ629K1 86 aa11.79□□□□□ -0.52
PNKP-221ENST00000627317 DHRS7BQ6IAN0 325 aaPredicted RBP11.79□□□□□ -0.52
PNKP-221ENST00000627317 DHRS11Q6UWP2 260 aa11.79□□□□□ -0.52
PNKP-221ENST00000627317 ARRDC1Q8N5I2 433 aa11.79□□□□□ -0.52
PNKP-221ENST00000627317 C3orf56Q8N813 242 aa11.79□□□□□ -0.52
PNKP-221ENST00000627317 GDPD1Q8N9F7 314 aa11.79□□□□□ -0.52
PNKP-221ENST00000627317 TRIM63Q969Q1 353 aa11.79□□□□□ -0.52
PNKP-221ENST00000627317 MOB3AQ96BX8 217 aa11.79□□□□□ -0.52
PNKP-221ENST00000627317 GAB2Q9UQC2 676 aa11.79□□□□□ -0.52
PNKP-221ENST00000627317 MMP24Q9Y5R2 645 aa11.79□□□□□ -0.52
PNKP-221ENST00000627317 OR5H14A6NHG9 310 aa11.78□□□□□ -0.52
PNKP-221ENST00000627317 NDUFA7O95182 113 aa11.78□□□□□ -0.52
PNKP-221ENST00000627317 APOA2P02652 100 aa11.78□□□□□ -0.52
PNKP-221ENST00000627317 AMY2AP04746 511 aa11.78□□□□□ -0.52
PNKP-221ENST00000627317 CRYBA1P05813 215 aa11.78□□□□□ -0.52
PNKP-221ENST00000627317 TMEM11P17152 192 aa11.78□□□□□ -0.52
PNKP-221ENST00000627317 INPP1P49441 399 aa11.78□□□□□ -0.52
PNKP-221ENST00000627317 RPL15P61313 204 aaKnown RBP11.78□□□□□ -0.52
PNKP-221ENST00000627317 HNF4GQ14541 408 aa11.78□□□□□ -0.52
PNKP-221ENST00000627317 ZNF660Q6AZW8 331 aaPredicted RBP11.78□□□□□ -0.52
PNKP-221ENST00000627317 GLDNQ6ZMI3 551 aaPredicted RBP11.78□□□□□ -0.52
PNKP-221ENST00000627317 THNSL2Q86YJ6 484 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms