RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 LINC01565O15544 149 aa12.89□□□□□ -0.35
PMS1-221ENST00000624204 RBFOX2O43251 390 aaKnown RBP eCLIP12.89□□□□□ -0.35
PMS1-221ENST00000624204 CBR3O75828 277 aa12.89□□□□□ -0.35
PMS1-221ENST00000624204 KRASP01116 189 aa12.89□□□□□ -0.35
PMS1-221ENST00000624204 FRMD6-AS1P0C7T7 363 aa12.89□□□□□ -0.35
PMS1-221ENST00000624204 COX5AP20674 150 aa12.89□□□□□ -0.35
PMS1-221ENST00000624204 MNX1P50219 401 aaPredicted RBP12.89□□□□□ -0.35
PMS1-221ENST00000624204 TCL1AP56279 114 aa12.89□□□□□ -0.35
PMS1-221ENST00000624204 PRDX4Q13162 271 aa12.89□□□□□ -0.35
PMS1-221ENST00000624204 TMEM144Q7Z5S9 345 aa12.89□□□□□ -0.35
PMS1-221ENST00000624204 ZNF808Q8N4W9 903 aaPredicted RBP12.89□□□□□ -0.35
PMS1-221ENST00000624204 SFRP2Q96HF1 295 aa12.89□□□□□ -0.35
PMS1-221ENST00000624204 ZNF586Q9NXT0 402 aa12.89□□□□□ -0.35
PMS1-221ENST00000624204 FBXL7Q9UJT9 491 aa12.89□□□□□ -0.35
PMS1-221ENST00000624204 LAMTOR2Q9Y2Q5 125 aa12.89□□□□□ -0.35
PMS1-221ENST00000624204 RNF114Q9Y508 228 aa12.89□□□□□ -0.35
PMS1-221ENST00000624204 FCN1O00602 326 aa12.89□□□□□ -0.35
PMS1-221ENST00000624204 IGKV1-39P01597 117 aa12.89□□□□□ -0.35
PMS1-221ENST00000624204 IGKV1D-39P04432 117 aa12.89□□□□□ -0.35
PMS1-221ENST00000624204 LINC00310P59036 64 aa12.89□□□□□ -0.35
PMS1-221ENST00000624204 SELENOTP62341 195 aa12.89□□□□□ -0.35
PMS1-221ENST00000624204 GNB1P62873 340 aa12.89□□□□□ -0.35
PMS1-221ENST00000624204 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.89□□□□□ -0.35
PMS1-221ENST00000624204 ASCL4Q6XD76 172 aa12.89□□□□□ -0.35
PMS1-221ENST00000624204 OR4B1Q8NGF8 309 aa12.89□□□□□ -0.35
PMS1-221ENST00000624204 OR1F12Q8NHA8 337 aa12.89□□□□□ -0.35
PMS1-221ENST00000624204 LTBP2Q14767 1821 aa12.88□□□□□ -0.35
PMS1-221ENST00000624204 WNT2P09544 360 aa12.88□□□□□ -0.35
PMS1-221ENST00000624204 ZNF32P17041 273 aa12.88□□□□□ -0.35
PMS1-221ENST00000624204 TFF3Q07654 80 aa12.88□□□□□ -0.35
PMS1-221ENST00000624204 IL23AQ9NPF7 189 aa12.88□□□□□ -0.35
PMS1-221ENST00000624204 DNAJC13O75165 2243 aa12.88□□□□□ -0.35
PMS1-221ENST00000624204 IGKV1-5P01602 117 aa12.88□□□□□ -0.35
PMS1-221ENST00000624204 IER3P46695 156 aa12.88□□□□□ -0.35
PMS1-221ENST00000624204 AMTP48728 403 aa12.88□□□□□ -0.35
PMS1-221ENST00000624204 ALKBH7Q9BT30 221 aaPredicted RBP12.88□□□□□ -0.35
PMS1-221ENST00000624204 GPM6AP51674 278 aa12.88□□□□□ -0.35
PMS1-221ENST00000624204 DAZAP2Q15038 168 aaPredicted RBP12.88□□□□□ -0.35
PMS1-221ENST00000624204 TRAV38-1A0A0B4J264 116 aa12.87□□□□□ -0.35
PMS1-221ENST00000624204 A0A1B0GX78 115 aa12.87□□□□□ -0.35
PMS1-221ENST00000624204 FASLGP48023 281 aa12.87□□□□□ -0.35
PMS1-221ENST00000624204 KLF3P57682 345 aaPredicted RBP12.87□□□□□ -0.35
PMS1-221ENST00000624204 CLDN23Q96B33 292 aa12.87□□□□□ -0.35
PMS1-221ENST00000624204 VPS25Q9BRG1 176 aa12.87□□□□□ -0.35
PMS1-221ENST00000624204 CLN8Q9UBY8 286 aa12.87□□□□□ -0.35
PMS1-221ENST00000624204 OR2W1Q9Y3N9 320 aa12.87□□□□□ -0.35
PMS1-221ENST00000624204 ATP23Q9Y6H3 246 aa12.87□□□□□ -0.35
PMS1-221ENST00000624204 NKX6-3A6NJ46 265 aa12.87□□□□□ -0.35
PMS1-221ENST00000624204 GABRG2P18507 467 aa12.87□□□□□ -0.35
PMS1-221ENST00000624204 EDDM3BP56851 147 aa12.87□□□□□ -0.35
PMS1-221ENST00000624204 ZNF816Q0VGE8 651 aaPredicted RBP12.87□□□□□ -0.35
PMS1-221ENST00000624204 FOXL1Q12952 345 aa12.87□□□□□ -0.35
PMS1-221ENST00000624204 OR4C5Q8NGB2 326 aa12.87□□□□□ -0.35
PMS1-221ENST00000624204 REPIN1Q9BWE0 567 aaKnown RBP12.87□□□□□ -0.35
PMS1-221ENST00000624204 MTIF3Q9H2K0 278 aaKnown RBP12.87□□□□□ -0.35
PMS1-221ENST00000624204 UQCR10Q9UDW1 63 aa12.87□□□□□ -0.35
PMS1-221ENST00000624204 ABCA1O95477 2261 aa12.87□□□□□ -0.35
PMS1-221ENST00000624204 A0A096LPE4 126 aa12.87□□□□□ -0.35
PMS1-221ENST00000624204 A0A1W2PPZ6 126 aa12.87□□□□□ -0.35
PMS1-221ENST00000624204 MLNRO43193 412 aa12.87□□□□□ -0.35
PMS1-221ENST00000624204 CRYGSP22914 178 aa12.87□□□□□ -0.35
PMS1-221ENST00000624204 LHX2P50458 406 aa12.87□□□□□ -0.35
PMS1-221ENST00000624204 ATP6V1FQ16864 119 aa12.87□□□□□ -0.35
PMS1-221ENST00000624204 C10orf128Q5T292 105 aa12.87□□□□□ -0.35
PMS1-221ENST00000624204 LYG1Q8N1E2 194 aa12.87□□□□□ -0.35
PMS1-221ENST00000624204 OR2M3Q8NG83 312 aa12.87□□□□□ -0.35
PMS1-221ENST00000624204 OR5P3Q8WZ94 311 aa12.87□□□□□ -0.35
PMS1-221ENST00000624204 ST6GALNAC6Q969X2 333 aa12.87□□□□□ -0.35
PMS1-221ENST00000624204 ZNF703Q9H7S9 590 aaPredicted RBP12.87□□□□□ -0.35
PMS1-221ENST00000624204 OR1A1Q9P1Q5 309 aa12.87□□□□□ -0.35
PMS1-221ENST00000624204 TP73-AS1Q9UF72 201 aa12.87□□□□□ -0.35
PMS1-221ENST00000624204 DCHS1Q96JQ0 3298 aa12.87□□□□□ -0.35
PMS1-221ENST00000624204 CDC34P49427 236 aaPredicted RBP12.86□□□□□ -0.35
PMS1-221ENST00000624204 LTC4SQ16873 150 aa12.86□□□□□ -0.35
PMS1-221ENST00000624204 C20orf204Q6ZNR8 217 aa12.86□□□□□ -0.35
PMS1-221ENST00000624204 IL36GQ9NZH8 169 aa12.86□□□□□ -0.35
PMS1-221ENST00000624204 TBL2Q9Y4P3 447 aaKnown RBP12.86□□□□□ -0.35
PMS1-221ENST00000624204 SNURFLB1AK76 121 aa12.86□□□□□ -0.35
PMS1-221ENST00000624204 ITGB1BP1O14713 200 aa12.86□□□□□ -0.35
PMS1-221ENST00000624204 CELA2AP08217 269 aa12.86□□□□□ -0.35
PMS1-221ENST00000624204 CTXN2P0C2S0 81 aa12.86□□□□□ -0.35
PMS1-221ENST00000624204 COMPP49747 757 aaPredicted RBP12.86□□□□□ -0.35
PMS1-221ENST00000624204 RHBDD2Q6NTF9 364 aa12.86□□□□□ -0.35
PMS1-221ENST00000624204 FAM19A2Q8N3H0 131 aa12.86□□□□□ -0.35
PMS1-221ENST00000624204 RNF2Q99496 336 aa12.86□□□□□ -0.35
PMS1-221ENST00000624204 FAM234AQ9H0X4 552 aa12.86□□□□□ -0.35
PMS1-221ENST00000624204 SYNGR3O43761 229 aa12.85□□□□□ -0.35
PMS1-221ENST00000624204 Q6ZSR3 168 aa12.85□□□□□ -0.35
PMS1-221ENST00000624204 OR10G8Q8NGN5 311 aa12.85□□□□□ -0.35
PMS1-221ENST00000624204 PTPRSQ13332 1948 aa12.85□□□□□ -0.35
PMS1-221ENST00000624204 HYPMO75409 117 aa12.85□□□□□ -0.35
PMS1-221ENST00000624204 MAJINQ3KP22 176 aa12.85□□□□□ -0.35
PMS1-221ENST00000624204 FAM27BQ5VT28 67 aa12.85□□□□□ -0.35
PMS1-221ENST00000624204 FAM53AQ6NSI3 398 aaPredicted RBP12.85□□□□□ -0.35
PMS1-221ENST00000624204 Q6ZS52 159 aa12.85□□□□□ -0.35
PMS1-221ENST00000624204 SLC45A2Q9UMX9 530 aa12.85□□□□□ -0.35
PMS1-221ENST00000624204 WDFY4Q6ZS81 3184 aa12.85□□□□□ -0.35
PMS1-221ENST00000624204 ASPMQ8IZT6 3477 aa12.85□□□□□ -0.35
PMS1-221ENST00000624204 H0Y8G0 127 aa12.85□□□□□ -0.35
PMS1-221ENST00000624204 M0QZ24 198 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms