RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 OR5K1Q8NHB7 308 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 ZNF721Q8TF20 911 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 GEMIN6Q8WXD5 167 aaKnown RBP2.49□□□□□ -2.01
BRCA1-229ENST00000621897 APOBEC3DQ96AK3 386 aaPredicted RBP2.49□□□□□ -2.01
BRCA1-229ENST00000621897 SMIM8Q96KF7 97 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 RNF157Q96PX1 679 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 SPACA5Q96QH8 159 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 TMEM70Q9BUB7 260 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 GNB1LQ9BYB4 327 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 TMEM126AQ9H061 195 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 SLCO1B3Q9NPD5 702 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 PRTFDC1Q9NRG1 225 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 C14orf105Q9NVL8 296 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 CACNA1SQ13698 1873 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 KMT2EQ8IZD2 1858 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 OVOS2A0A0J9YW53 1432 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 OVOS2Q6IE36 1432 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 SSH2Q76I76 1423 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 MIA2Q96PC5 1412 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 ITGB4P16144 1822 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 RTL1A6NKG5 1358 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 NALCNQ8IZF0 1738 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 DENND4BO75064 1496 aaPredicted RBP2.48□□□□□ -2.01
BRCA1-229ENST00000621897 A0A096LPI6 279 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 A0A0G2JN53 185 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 OR5H14A6NHG9 310 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 SIGLEC16A6NMB1 481 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 H7C1C5 153 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 FFAR1O14842 300 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 CHST10O43529 356 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 ZNF324O75467 553 aaPredicted RBP2.48□□□□□ -2.01
BRCA1-229ENST00000621897 BANF1O75531 89 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 TNFSF15O95150 251 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 IFNA4P05014 189 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 S100A8P05109 93 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 SERPINE1P05121 402 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 IGHV4-34P06331 123 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 CECR9P0C854 216 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 IGHV3-43DP0DP04 118 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 S100A7P31151 101 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 CCL23P55773 120 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 PIGPP57054 158 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 KLF3P57682 345 aaPredicted RBP2.48□□□□□ -2.01
BRCA1-229ENST00000621897 LCN6P62502 163 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 HLA-DRB3P79483 266 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 IL15RAQ13261 267 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 PNOCQ13519 176 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 LCN12Q6JVE5 192 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 LCN8Q6JVE9 175 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 AGTRAPQ6RW13 159 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 H2AFVQ71UI9 128 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 SLC25A45Q8N413 288 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 TMEM252Q8N6L7 170 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 ZNF615Q8N8J6 731 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 GDPD1Q8N9F7 314 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 OR8B12Q8NGG6 310 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 ZNF675Q8TD23 568 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 CT55Q8WUE5 264 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 ROPN1LQ96C74 230 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 GPR146Q96CH1 333 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 PLEKHB2Q96CS7 222 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 FCRL1Q96LA6 429 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 CCDC115Q96NT0 180 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 OR7D2Q96RA2 312 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 SERPINI1Q99574 410 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 DOHHQ9BU89 302 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 GABARAPL3Q9BY60 117 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 CHST6Q9GZX3 395 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 SLC25A31Q9H0C2 315 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 RNASE7Q9H1E1 156 aaKnown RBP2.48□□□□□ -2.01
BRCA1-229ENST00000621897 RBFOX1Q9NWB1 397 aaKnown RBP2.48□□□□□ -2.01
BRCA1-229ENST00000621897 TMEM216Q9P0N5 145 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 TRMT112Q9UI30 125 aaKnown RBP2.48□□□□□ -2.01
BRCA1-229ENST00000621897 SSR3Q9UNL2 185 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 WASHC3Q9Y3C0 194 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 HDGFL3Q9Y3E1 203 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 HES2Q9Y543 173 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 SLC25A15Q9Y619 301 aa2.48□□□□□ -2.01
BRCA1-229ENST00000621897 DHX57Q6P158 1386 aaKnown RBP2.48□□□□□ -2.01
BRCA1-229ENST00000621897 UHRF1BP1LA0JNW5 1464 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 IGKV2-28A0A075B6P5 120 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 TRAV8-3A0A0A6YYJ7 113 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 IGHV2-26A0A0B4J1V2 119 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 TRAV26-2A0A0B4J265 109 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 IGHV1-69DA0A0B4J2H0 117 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 TMEM189A5PLL7 270 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 CCDC160A6NGH7 325 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 PIAS1O75925 651 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 INSP01308 110 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 IGKV2D-28P01615 120 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 DBIP07108 87 aaKnown RBP2.47□□□□□ -2.01
BRCA1-229ENST00000621897 LGALS1P09382 135 aaKnown RBP2.47□□□□□ -2.01
BRCA1-229ENST00000621897 TSPAN19P0C672 248 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 MPC1LP0DKB6 136 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 FGF6P10767 208 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 APLNRP35414 380 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 NCBP2P52298 156 aaKnown RBP eCLIP2.47□□□□□ -2.01
BRCA1-229ENST00000621897 ZNF138P52744 262 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 TAS2R46P59540 309 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 GNG2P59768 71 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms