RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 MANBALQ9NQG1 85 aa8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 FAM157CP0CG43 387 aa8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 VSIG10L2P0DP72 767 aa8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 MUC1P15941 1255 aaPredicted RBP8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 TSPOP30536 169 aa8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 WNT5AP41221 380 aa8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 HERVK_113P61574 105 aa8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 SNRPD3P62318 126 aaKnown RBP8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 KLHDC1Q8N7A1 406 aa8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 ALX4Q9H161 411 aaPredicted RBP8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 ADAP1O75689 374 aa8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 CTSBP07858 339 aa8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 C19orf54Q5BKX5 351 aa8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 NCMAPQ5T1S8 102 aa8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 Q6ZN92 141 aa8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 VPS25Q9BRG1 176 aa8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 PRO1933Q9H354 126 aa8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 KLK13Q9UKR3 277 aa8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 RIF1Q5UIP0 2472 aaKnown RBP8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 IGKV3D-15A0A087WSY6 115 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 TRAV30A0A087WSZ9 112 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 NPIPB6E9PJ23 425 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 MFNGO00587 321 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 RHBDL1O75783 438 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 IGKV3-15P01624 115 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 CELA3AP09093 270 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 RFPL3SP0C7P2 107 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 CEBPDP49716 269 aaPredicted RBP8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 RELQ04864 619 aaPredicted RBP8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 MRPL37Q9BZE1 423 aaKnown RBP8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 RTTNQ86VV8 2226 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 C7orf77A4D0Y5 90 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 NKX2-6A6NCS4 301 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 FCN1O00602 326 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 S1PR2O95136 353 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 CDS2O95674 445 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 C1QCP02747 245 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 SULT1A1P50225 295 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 ZNF154Q13106 437 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 CD200R1LQ6Q8B3 271 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 ISOC2Q96AB3 205 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 TNFSF18Q9UNG2 199 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 TMSB15BA0A087X1C1 80 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 KIAA1324LA8MWY0 1029 aaPredicted RBP8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 E9PLN8 166 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 SELENOTP62341 195 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 TMEM97Q5BJF2 176 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 VKORC1Q9BQB6 163 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 NPFFR1Q9GZQ6 430 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 SRD5A3Q9H8P0 318 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 ST6GALNAC2Q9UJ37 374 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 TRAV8-7A0A075B6U6 113 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 MBPP02686 304 aaPredicted RBP8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 WDR73Q6P4I2 378 aa8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 C1orf162Q8NEQ5 155 aaPredicted RBP8.41□□□□□ -1.06
CLTCL1-211ENST00000621271 NPIPB11E5RHQ5 1161 aa8.4□□□□□ -1.06
CLTCL1-211ENST00000621271 KCNAB3O43448 404 aa8.4□□□□□ -1.06
CLTCL1-211ENST00000621271 TRGV3P03979 118 aa8.4□□□□□ -1.06
CLTCL1-211ENST00000621271 MELTFP08582 738 aa8.4□□□□□ -1.06
CLTCL1-211ENST00000621271 CD59P13987 128 aa8.4□□□□□ -1.06
CLTCL1-211ENST00000621271 PTGDSP41222 190 aa8.4□□□□□ -1.06
CLTCL1-211ENST00000621271 TCTEX1D1Q8N7M0 179 aa8.4□□□□□ -1.06
CLTCL1-211ENST00000621271 TMEM37Q8WXS4 190 aa8.4□□□□□ -1.06
CLTCL1-211ENST00000621271 PAXXQ9BUH6 204 aa8.4□□□□□ -1.06
CLTCL1-211ENST00000621271 VAMP8Q9BV40 100 aa8.4□□□□□ -1.06
CLTCL1-211ENST00000621271 C11orf94C9JXX5 98 aa8.4□□□□□ -1.06
CLTCL1-211ENST00000621271 DEDDO75618 318 aa8.4□□□□□ -1.06
CLTCL1-211ENST00000621271 FXYD3Q14802 87 aa8.4□□□□□ -1.06
CLTCL1-211ENST00000621271 HDHD3Q9BSH5 251 aaPredicted RBP8.4□□□□□ -1.06
CLTCL1-211ENST00000621271 LINC00470Q9BZP3 86 aa8.4□□□□□ -1.06
CLTCL1-211ENST00000621271 SIRT4Q9Y6E7 314 aaPredicted RBP8.4□□□□□ -1.06
CLTCL1-211ENST00000621271 NCOR1O75376 2440 aa8.4□□□□□ -1.06
CLTCL1-211ENST00000621271 DSPPQ9NZW4 1301 aa8.4□□□□□ -1.06
CLTCL1-211ENST00000621271 RBFOX3A6NFN3 312 aa8.4□□□□□ -1.06
CLTCL1-211ENST00000621271 CSN3P07498 182 aa8.4□□□□□ -1.06
CLTCL1-211ENST00000621271 FCGR3AP08637 254 aa8.4□□□□□ -1.06
CLTCL1-211ENST00000621271 RNF224P0DH78 156 aa8.4□□□□□ -1.06
CLTCL1-211ENST00000621271 USF1P22415 310 aaPredicted RBP8.4□□□□□ -1.06
CLTCL1-211ENST00000621271 PNRC1Q12796 327 aaPredicted RBP8.4□□□□□ -1.06
CLTCL1-211ENST00000621271 GTF2H5Q6ZYL4 71 aa8.4□□□□□ -1.06
CLTCL1-211ENST00000621271 PARD6AQ9NPB6 346 aa8.4□□□□□ -1.06
CLTCL1-211ENST00000621271 A0A087X0M5 115 aa8.4□□□□□ -1.07
CLTCL1-211ENST00000621271 A0A0G2JLM5 398 aa8.4□□□□□ -1.07
CLTCL1-211ENST00000621271 A0A1B0GX30 115 aa8.4□□□□□ -1.07
CLTCL1-211ENST00000621271 A0A1W2PRX2 142 aa8.4□□□□□ -1.07
CLTCL1-211ENST00000621271 FAM90A10PA6NDY2 464 aa8.4□□□□□ -1.07
CLTCL1-211ENST00000621271 FAM90A18PA6NE21 464 aa8.4□□□□□ -1.07
CLTCL1-211ENST00000621271 FAM90A16PA6NEW6 464 aa8.4□□□□□ -1.07
CLTCL1-211ENST00000621271 FAM90A20PA6NIJ5 464 aa8.4□□□□□ -1.07
CLTCL1-211ENST00000621271 FAM90A8PA6NJQ4 464 aa8.4□□□□□ -1.07
CLTCL1-211ENST00000621271 FAM90A7PA6NKC0 464 aa8.4□□□□□ -1.07
CLTCL1-211ENST00000621271 FAM90A22PA8MWA6 464 aa8.4□□□□□ -1.07
CLTCL1-211ENST00000621271 FAM90A12PA8MX19 464 aa8.4□□□□□ -1.07
CLTCL1-211ENST00000621271 FAM90A5PA8MXJ8 464 aa8.4□□□□□ -1.07
CLTCL1-211ENST00000621271 FAM90A23PA8MXZ1 464 aa8.4□□□□□ -1.07
CLTCL1-211ENST00000621271 ISG15P05161 165 aa8.4□□□□□ -1.07
CLTCL1-211ENST00000621271 ACAA1P09110 424 aaPredicted RBP8.4□□□□□ -1.07
CLTCL1-211ENST00000621271 FAM90A15PP0C7V4 464 aa8.4□□□□□ -1.07
CLTCL1-211ENST00000621271 FAM90A13PP0C7W8 464 aa8.4□□□□□ -1.07
CLTCL1-211ENST00000621271 FAM90A14PP0C7W9 464 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms