RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 NBR2O15453 112 aa12.61□□□□□ -0.39
BRCA1-228ENST00000618469 GSTP1P09211 210 aaKnown RBP12.61□□□□□ -0.39
BRCA1-228ENST00000618469 CT45A6P0DMU7 189 aa12.61□□□□□ -0.39
BRCA1-228ENST00000618469 CT45A5P0DMU8 189 aa12.61□□□□□ -0.39
BRCA1-228ENST00000618469 CT45A7P0DMV0 189 aa12.61□□□□□ -0.39
BRCA1-228ENST00000618469 DTYMKP23919 212 aa12.61□□□□□ -0.39
BRCA1-228ENST00000618469 SOX6P35712 828 aa12.61□□□□□ -0.39
BRCA1-228ENST00000618469 SLC35B1P78383 322 aa12.61□□□□□ -0.39
BRCA1-228ENST00000618469 HACD4Q5VWC8 232 aa12.61□□□□□ -0.39
BRCA1-228ENST00000618469 OR2D2Q9H210 308 aa12.61□□□□□ -0.39
BRCA1-228ENST00000618469 TSSC4Q9Y5U2 329 aaPredicted RBP12.61□□□□□ -0.39
BRCA1-228ENST00000618469 H0YJW9 148 aa12.6□□□□□ -0.39
BRCA1-228ENST00000618469 H7C2Y5 167 aa12.6□□□□□ -0.39
BRCA1-228ENST00000618469 DIRAS3O95661 229 aa12.6□□□□□ -0.39
BRCA1-228ENST00000618469 SMIM18P0DKX4 95 aa12.6□□□□□ -0.39
BRCA1-228ENST00000618469 PF4V1P10720 104 aa12.6□□□□□ -0.39
BRCA1-228ENST00000618469 ZNF260Q3ZCT1 412 aa12.6□□□□□ -0.39
BRCA1-228ENST00000618469 Q6ZS49 121 aa12.6□□□□□ -0.39
BRCA1-228ENST00000618469 DRAXINQ8NBI3 349 aaPredicted RBP12.6□□□□□ -0.39
BRCA1-228ENST00000618469 MRAPQ8TCY5 172 aa12.6□□□□□ -0.39
BRCA1-228ENST00000618469 RITA1Q96K30 269 aa12.6□□□□□ -0.39
BRCA1-228ENST00000618469 KIAA1456Q9P272 454 aa12.6□□□□□ -0.39
BRCA1-228ENST00000618469 ZNF107Q9UII5 783 aaPredicted RBP12.6□□□□□ -0.39
BRCA1-228ENST00000618469 WASHC3Q9Y3C0 194 aa12.6□□□□□ -0.39
BRCA1-228ENST00000618469 M0R1X1 148 aa12.59□□□□□ -0.39
BRCA1-228ENST00000618469 TFAP2AP05549 437 aa12.59□□□□□ -0.39
BRCA1-228ENST00000618469 OR8U9P0C7N5 309 aa12.59□□□□□ -0.39
BRCA1-228ENST00000618469 PITPNAQ00169 270 aa12.59□□□□□ -0.39
BRCA1-228ENST00000618469 SRSF7Q16629 238 aaKnown RBP eCLIP12.59□□□□□ -0.39
BRCA1-228ENST00000618469 PNLIPRP3Q17RR3 467 aa12.59□□□□□ -0.39
BRCA1-228ENST00000618469 CROCCP3Q8IVE0 287 aa12.59□□□□□ -0.39
BRCA1-228ENST00000618469 OR8U1Q8NH10 309 aa12.59□□□□□ -0.39
BRCA1-228ENST00000618469 ST6GALNAC5Q9BVH7 336 aa12.59□□□□□ -0.39
BRCA1-228ENST00000618469 FUNDC2Q9BWH2 189 aa12.59□□□□□ -0.39
BRCA1-228ENST00000618469 TOLLIPQ9H0E2 274 aa12.59□□□□□ -0.39
BRCA1-228ENST00000618469 SPATA2Q9UM82 520 aa12.59□□□□□ -0.39
BRCA1-228ENST00000618469 RBM7Q9Y580 266 aaKnown RBP12.59□□□□□ -0.39
BRCA1-228ENST00000618469 TRAV18A0A075B6X5 111 aa12.58□□□□□ -0.4
BRCA1-228ENST00000618469 SSX5O60225 188 aa12.58□□□□□ -0.4
BRCA1-228ENST00000618469 PROP1O75360 226 aa12.58□□□□□ -0.4
BRCA1-228ENST00000618469 APOA2P02652 100 aa12.58□□□□□ -0.4
BRCA1-228ENST00000618469 MC5RP33032 325 aa12.58□□□□□ -0.4
BRCA1-228ENST00000618469 RPS19P39019 145 aaKnown RBP12.58□□□□□ -0.4
BRCA1-228ENST00000618469 NCS1P62166 190 aa12.58□□□□□ -0.4
BRCA1-228ENST00000618469 C5orf64Q2M2E5 130 aa12.58□□□□□ -0.4
BRCA1-228ENST00000618469 ZNF383Q8NA42 475 aa12.58□□□□□ -0.4
BRCA1-228ENST00000618469 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.58□□□□□ -0.4
BRCA1-228ENST00000618469 OR5AN1Q8NGI8 311 aa12.58□□□□□ -0.4
BRCA1-228ENST00000618469 OR13F1Q8NGS4 319 aa12.58□□□□□ -0.4
BRCA1-228ENST00000618469 TMEM127O75204 238 aa12.57□□□□□ -0.4
BRCA1-228ENST00000618469 NDUFA3O95167 84 aa12.57□□□□□ -0.4
BRCA1-228ENST00000618469 HLA-DRB1P01911 266 aa12.57□□□□□ -0.4
BRCA1-228ENST00000618469 PF4P02776 101 aa12.57□□□□□ -0.4
BRCA1-228ENST00000618469 VDAC1P21796 283 aa12.57□□□□□ -0.4
BRCA1-228ENST00000618469 LINC00205P59089 165 aa12.57□□□□□ -0.4
BRCA1-228ENST00000618469 RPL23AP62750 156 aaKnown RBP12.57□□□□□ -0.4
BRCA1-228ENST00000618469 PLGLAQ15195 96 aa12.57□□□□□ -0.4
BRCA1-228ENST00000618469 SAMD5Q5TGI4 173 aa12.57□□□□□ -0.4
BRCA1-228ENST00000618469 H1FOOQ8IZA3 346 aaPredicted RBP12.57□□□□□ -0.4
BRCA1-228ENST00000618469 COMMD1Q8N668 190 aa12.57□□□□□ -0.4
BRCA1-228ENST00000618469 NPBQ8NG41 125 aa12.57□□□□□ -0.4
BRCA1-228ENST00000618469 C5orf30Q96GV9 206 aa12.57□□□□□ -0.4
BRCA1-228ENST00000618469 GON7Q9BXV9 100 aa12.57□□□□□ -0.4
BRCA1-228ENST00000618469 DCSTAMPQ9H295 470 aa12.57□□□□□ -0.4
BRCA1-228ENST00000618469 FBXL15Q9H469 300 aa12.57□□□□□ -0.4
BRCA1-228ENST00000618469 PARP11Q9NR21 331 aa12.57□□□□□ -0.4
BRCA1-228ENST00000618469 SDHAF2Q9NX18 166 aa12.57□□□□□ -0.4
BRCA1-228ENST00000618469 RYR3Q15413 4870 aa12.57□□□□□ -0.4
BRCA1-228ENST00000618469 A0A0A6YYH2 397 aa12.56□□□□□ -0.4
BRCA1-228ENST00000618469 A6NJ64 397 aa12.56□□□□□ -0.4
BRCA1-228ENST00000618469 NUDT19A8MXV4 375 aa12.56□□□□□ -0.4
BRCA1-228ENST00000618469 ATP6V0E1O15342 81 aa12.56□□□□□ -0.4
BRCA1-228ENST00000618469 RBBP9O75884 186 aa12.56□□□□□ -0.4
BRCA1-228ENST00000618469 VBP1P61758 197 aa12.56□□□□□ -0.4
BRCA1-228ENST00000618469 UBE2NLQ5JXB2 153 aa12.56□□□□□ -0.4
BRCA1-228ENST00000618469 PDPNQ86YL7 162 aa12.56□□□□□ -0.4
BRCA1-228ENST00000618469 DIABLOQ9NR28 239 aa12.56□□□□□ -0.4
BRCA1-228ENST00000618469 SLC35D1Q9NTN3 355 aa12.56□□□□□ -0.4
BRCA1-228ENST00000618469 IGHV7-81A0A0B4J1V7 117 aa12.55□□□□□ -0.4
BRCA1-228ENST00000618469 J3QRK9 145 aa12.55□□□□□ -0.4
BRCA1-228ENST00000618469 RRHO14718 337 aa12.55□□□□□ -0.4
BRCA1-228ENST00000618469 IGKV1-16P04430 117 aa12.55□□□□□ -0.4
BRCA1-228ENST00000618469 IGF1P05019 195 aa12.55□□□□□ -0.4
BRCA1-228ENST00000618469 PTHLHP12272 177 aa12.55□□□□□ -0.4
BRCA1-228ENST00000618469 NFYAP23511 347 aaPredicted RBP12.55□□□□□ -0.4
BRCA1-228ENST00000618469 OXLD1Q5BKU9 147 aa12.55□□□□□ -0.4
BRCA1-228ENST00000618469 TEX38Q6PEX7 206 aa12.55□□□□□ -0.4
BRCA1-228ENST00000618469 LCNL1Q6ZST4 164 aa12.55□□□□□ -0.4
BRCA1-228ENST00000618469 SAMD12Q8N8I0 201 aa12.55□□□□□ -0.4
BRCA1-228ENST00000618469 KLHL30-AS1Q8NEE0 82 aa12.55□□□□□ -0.4
BRCA1-228ENST00000618469 SLC25A46Q96AG3 418 aa12.55□□□□□ -0.4
BRCA1-228ENST00000618469 OR51J1Q9H342 316 aa12.55□□□□□ -0.4
BRCA1-228ENST00000618469 ANXA10Q9UJ72 324 aa12.55□□□□□ -0.4
BRCA1-228ENST00000618469 CTXN2P0C2S0 81 aa12.54□□□□□ -0.4
BRCA1-228ENST00000618469 OR5H8P0DN80 308 aa12.54□□□□□ -0.4
BRCA1-228ENST00000618469 ARPC4P59998 168 aa12.54□□□□□ -0.4
BRCA1-228ENST00000618469 NDPQ00604 133 aa12.54□□□□□ -0.4
BRCA1-228ENST00000618469 CFHR3Q02985 330 aa12.54□□□□□ -0.4
BRCA1-228ENST00000618469 CXorf66Q5JRM2 361 aaPredicted RBP12.54□□□□□ -0.4
BRCA1-228ENST00000618469 KPRPQ5T749 579 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms