RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 C11orf54Q9H0W9 315 aaPredicted RBP7.55□□□□□ -1.2
TARDBP-218ENST00000617172 KCNK15Q9H427 330 aa7.55□□□□□ -1.2
TARDBP-218ENST00000617172 PARP11Q9NR21 331 aa7.55□□□□□ -1.2
TARDBP-218ENST00000617172 SEC14L6B5MCN3 397 aa7.54□□□□□ -1.2
TARDBP-218ENST00000617172 TRDCB7Z8K6 153 aa7.54□□□□□ -1.2
TARDBP-218ENST00000617172 I3L521 148 aa7.54□□□□□ -1.2
TARDBP-218ENST00000617172 LDLRAD4O15165 306 aa7.54□□□□□ -1.2
TARDBP-218ENST00000617172 MRPS14O60783 128 aaKnown RBP7.54□□□□□ -1.2
TARDBP-218ENST00000617172 DIRAS3O95661 229 aa7.54□□□□□ -1.2
TARDBP-218ENST00000617172 SCTP09683 121 aa7.54□□□□□ -1.2
TARDBP-218ENST00000617172 CD3GP09693 182 aa7.54□□□□□ -1.2
TARDBP-218ENST00000617172 GALP22466 123 aa7.54□□□□□ -1.2
TARDBP-218ENST00000617172 GADD45AP24522 165 aa7.54□□□□□ -1.2
TARDBP-218ENST00000617172 CX3CL1P78423 397 aa7.54□□□□□ -1.2
TARDBP-218ENST00000617172 TAGLNQ01995 201 aaKnown RBP7.54□□□□□ -1.2
TARDBP-218ENST00000617172 ZNF616Q08AN1 781 aa7.54□□□□□ -1.2
TARDBP-218ENST00000617172 KIAA0141Q14154 515 aaPredicted RBP7.54□□□□□ -1.2
TARDBP-218ENST00000617172 AKIRIN2Q53H80 203 aa7.54□□□□□ -1.2
TARDBP-218ENST00000617172 RPL39P5Q59GN2 51 aa7.54□□□□□ -1.2
TARDBP-218ENST00000617172 IZUMO2Q6UXV1 221 aa7.54□□□□□ -1.2
TARDBP-218ENST00000617172 ZNF562Q6V9R5 426 aa7.54□□□□□ -1.2
TARDBP-218ENST00000617172 ZNF367Q7RTV3 350 aa7.54□□□□□ -1.2
TARDBP-218ENST00000617172 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.54□□□□□ -1.2
TARDBP-218ENST00000617172 OR4A4PQ8NGN8 299 aa7.54□□□□□ -1.2
TARDBP-218ENST00000617172 OR1N2Q8NGR9 330 aa7.54□□□□□ -1.2
TARDBP-218ENST00000617172 RAB3CQ96E17 227 aa7.54□□□□□ -1.2
TARDBP-218ENST00000617172 CYYR1Q96J86 154 aa7.54□□□□□ -1.2
TARDBP-218ENST00000617172 TSNAXQ99598 290 aaKnown RBP7.54□□□□□ -1.2
TARDBP-218ENST00000617172 B9D2Q9BPU9 175 aa7.54□□□□□ -1.2
TARDBP-218ENST00000617172 HDHD3Q9BSH5 251 aaPredicted RBP7.54□□□□□ -1.2
TARDBP-218ENST00000617172 TOLLIPQ9H0E2 274 aa7.54□□□□□ -1.2
TARDBP-218ENST00000617172 KLK15Q9H2R5 256 aa7.54□□□□□ -1.2
TARDBP-218ENST00000617172 RAB26Q9ULW5 256 aa7.54□□□□□ -1.2
TARDBP-218ENST00000617172 FOXA2Q9Y261 457 aaPredicted RBP7.54□□□□□ -1.2
TARDBP-218ENST00000617172 NUBP2Q9Y5Y2 271 aa7.54□□□□□ -1.2
TARDBP-218ENST00000617172 TMEM272A0A1B0GTI8 110 aa7.53□□□□□ -1.2
TARDBP-218ENST00000617172 METTL21EPA6NDL7 271 aa7.53□□□□□ -1.2
TARDBP-218ENST00000617172 IFITM5A6NNB3 132 aa7.53□□□□□ -1.2
TARDBP-218ENST00000617172 ARPC1BO15143 372 aaKnown RBP7.53□□□□□ -1.2
TARDBP-218ENST00000617172 SPDEFO95238 335 aa7.53□□□□□ -1.2
TARDBP-218ENST00000617172 APOA2P02652 100 aa7.53□□□□□ -1.2
TARDBP-218ENST00000617172 TFAP2AP05549 437 aa7.53□□□□□ -1.2
TARDBP-218ENST00000617172 NHLRC4P0CG21 123 aaPredicted RBP7.53□□□□□ -1.2
TARDBP-218ENST00000617172 RAB6AP20340 208 aa7.53□□□□□ -1.2
TARDBP-218ENST00000617172 MYL9P24844 172 aa7.53□□□□□ -1.2
TARDBP-218ENST00000617172 MAP2K4P45985 399 aa7.53□□□□□ -1.2
TARDBP-218ENST00000617172 CLDN12P56749 244 aa7.53□□□□□ -1.2
TARDBP-218ENST00000617172 ARL6IP1Q15041 203 aa7.53□□□□□ -1.2
TARDBP-218ENST00000617172 PLAC9Q5JTB6 97 aa7.53□□□□□ -1.2
TARDBP-218ENST00000617172 CD200R1LQ6Q8B3 271 aa7.53□□□□□ -1.2
TARDBP-218ENST00000617172 ZNF429Q86V71 674 aa7.53□□□□□ -1.2
TARDBP-218ENST00000617172 PDPNQ86YL7 162 aa7.53□□□□□ -1.2
TARDBP-218ENST00000617172 FLYWCH2Q96CP2 140 aaKnown RBP7.53□□□□□ -1.2
TARDBP-218ENST00000617172 RBMXL1Q96E39 390 aaKnown RBP7.53□□□□□ -1.2
TARDBP-218ENST00000617172 CNBD2Q96M20 576 aa7.53□□□□□ -1.2
TARDBP-218ENST00000617172 PARP12Q9H0J9 701 aaKnown RBP7.53□□□□□ -1.2
TARDBP-218ENST00000617172 FBXL15Q9H469 300 aa7.53□□□□□ -1.2
TARDBP-218ENST00000617172 OR1A1Q9P1Q5 309 aa7.53□□□□□ -1.2
TARDBP-218ENST00000617172 METTL1Q9UBP6 276 aaKnown RBP7.53□□□□□ -1.2
TARDBP-218ENST00000617172 GAB2Q9UQC2 676 aa7.53□□□□□ -1.2
TARDBP-218ENST00000617172 TRDV1A0A1B0GX56 115 aa7.52□□□□□ -1.21
TARDBP-218ENST00000617172 A0A1W2PN81 502 aa7.52□□□□□ -1.21
TARDBP-218ENST00000617172 FCN1O00602 326 aa7.52□□□□□ -1.21
TARDBP-218ENST00000617172 FABP7O15540 132 aa7.52□□□□□ -1.21
TARDBP-218ENST00000617172 PROP1O75360 226 aa7.52□□□□□ -1.21
TARDBP-218ENST00000617172 RAB3BP20337 219 aa7.52□□□□□ -1.21
TARDBP-218ENST00000617172 CHRNA7P36544 502 aa7.52□□□□□ -1.21
TARDBP-218ENST00000617172 LGALS7P47929 136 aa7.52□□□□□ -1.21
TARDBP-218ENST00000617172 LUMP51884 338 aaPredicted RBP7.52□□□□□ -1.21
TARDBP-218ENST00000617172 RPS16P62249 146 aaKnown RBP7.52□□□□□ -1.21
TARDBP-218ENST00000617172 CBX3Q13185 183 aa7.52□□□□□ -1.21
TARDBP-218ENST00000617172 PSG5Q15238 335 aa7.52□□□□□ -1.21
TARDBP-218ENST00000617172 SRSF7Q16629 238 aaKnown RBP eCLIP7.52□□□□□ -1.212e-10■■■□□ 18.4
TARDBP-218ENST00000617172 ECSCRQ19T08 205 aa7.52□□□□□ -1.21
TARDBP-218ENST00000617172 ZNF260Q3ZCT1 412 aa7.52□□□□□ -1.21
TARDBP-218ENST00000617172 C19orf54Q5BKX5 351 aa7.52□□□□□ -1.21
TARDBP-218ENST00000617172 HES5Q5TA89 166 aa7.52□□□□□ -1.21
TARDBP-218ENST00000617172 GLDNQ6ZMI3 551 aaPredicted RBP7.52□□□□□ -1.21
TARDBP-218ENST00000617172 PPP1R27Q86WC6 154 aa7.52□□□□□ -1.21
TARDBP-218ENST00000617172 DRAXINQ8NBI3 349 aaPredicted RBP7.52□□□□□ -1.21
TARDBP-218ENST00000617172 OR10R2Q8NGX6 335 aa7.52□□□□□ -1.21
TARDBP-218ENST00000617172 OR10J5Q8NHC4 309 aa7.52□□□□□ -1.21
TARDBP-218ENST00000617172 ABHD5Q8WTS1 349 aa7.52□□□□□ -1.21
TARDBP-218ENST00000617172 SLA2Q9H6Q3 261 aa7.52□□□□□ -1.21
TARDBP-218ENST00000617172 GNB4Q9HAV0 340 aa7.52□□□□□ -1.21
TARDBP-218ENST00000617172 NDUFB11Q9NX14 153 aa7.52□□□□□ -1.21
TARDBP-218ENST00000617172 RDH8Q9NYR8 311 aa7.52□□□□□ -1.21
TARDBP-218ENST00000617172 SCOCQ9UIL1 159 aa7.52□□□□□ -1.21
TARDBP-218ENST00000617172 KCNK7Q9Y2U2 307 aa7.52□□□□□ -1.21
TARDBP-218ENST00000617172 IGKV1-6A0A0C4DH72 117 aa7.51□□□□□ -1.21
TARDBP-218ENST00000617172 LINC01619G3V211 115 aa7.51□□□□□ -1.21
TARDBP-218ENST00000617172 RAB27BO00194 218 aa7.51□□□□□ -1.21
TARDBP-218ENST00000617172 IGKV1-16P04430 117 aa7.51□□□□□ -1.21
TARDBP-218ENST00000617172 FCGR3AP08637 254 aa7.51□□□□□ -1.21
TARDBP-218ENST00000617172 EGR2P11161 476 aaPredicted RBP7.51□□□□□ -1.21
TARDBP-218ENST00000617172 HIST1H1DP16402 221 aaKnown RBP7.51□□□□□ -1.21
TARDBP-218ENST00000617172 TALDO1P37837 337 aa7.51□□□□□ -1.21
TARDBP-218ENST00000617172 ECI1P42126 302 aa7.51□□□□□ -1.21
TARDBP-218ENST00000617172 SSX1Q16384 188 aa7.51□□□□□ -1.21
TARDBP-218ENST00000617172 ACTBL2Q562R1 376 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms