RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 HILPDAQ9Y5L2 63 aa11.91□□□□□ -0.5
CD48-203ENST00000613788 A0A0U1RQK1 487 aa11.9□□□□□ -0.5
CD48-203ENST00000613788 GNRHRP30968 328 aa11.9□□□□□ -0.5
CD48-203ENST00000613788 ZNF816Q0VGE8 651 aaPredicted RBP11.9□□□□□ -0.5
CD48-203ENST00000613788 RBMS2Q15434 407 aaKnown RBP11.9□□□□□ -0.5
CD48-203ENST00000613788 RPL39P5Q59GN2 51 aa11.9□□□□□ -0.5
CD48-203ENST00000613788 LDLRAD2Q5SZI1 272 aa11.9□□□□□ -0.5
CD48-203ENST00000613788 OR8H3Q8N146 312 aa11.9□□□□□ -0.5
CD48-203ENST00000613788 DRAM1Q8N682 238 aa11.9□□□□□ -0.5
CD48-203ENST00000613788 POC5Q8NA72 575 aa11.9□□□□□ -0.5
CD48-203ENST00000613788 MARCH1Q8TCQ1 289 aa11.9□□□□□ -0.5
CD48-203ENST00000613788 RTN4IP1Q8WWV3 396 aaPredicted RBP11.9□□□□□ -0.5
CD48-203ENST00000613788 ZNF486Q96H40 463 aaPredicted RBP11.9□□□□□ -0.5
CD48-203ENST00000613788 ZNF251Q9BRH9 671 aa11.9□□□□□ -0.5
CD48-203ENST00000613788 RSRP1Q9BUV0 290 aa11.9□□□□□ -0.5
CD48-203ENST00000613788 FAM240BA0A1B0GVZ2 78 aa11.89□□□□□ -0.51
CD48-203ENST00000613788 M0R1X1 148 aa11.89□□□□□ -0.51
CD48-203ENST00000613788 GPR31O00270 319 aa11.89□□□□□ -0.51
CD48-203ENST00000613788 CCR6P51684 374 aa11.89□□□□□ -0.51
CD48-203ENST00000613788 ZNF818PQ6ZRF7 136 aa11.89□□□□□ -0.51
CD48-203ENST00000613788 BVESQ8NE79 360 aa11.89□□□□□ -0.51
CD48-203ENST00000613788 AJUBAQ96IF1 538 aa11.89□□□□□ -0.51
CD48-203ENST00000613788 MEGF9Q9H1U4 602 aa11.89□□□□□ -0.51
CD48-203ENST00000613788 DPAGT1Q9H3H5 408 aa11.89□□□□□ -0.51
CD48-203ENST00000613788 GPR132Q9UNW8 380 aa11.89□□□□□ -0.51
CD48-203ENST00000613788 C14orf166Q9Y224 244 aaKnown RBP11.89□□□□□ -0.51
CD48-203ENST00000613788 SVEP1Q4LDE5 3571 aa11.88□□□□□ -0.51
CD48-203ENST00000613788 VGLL3A8MV65 326 aa11.88□□□□□ -0.51
CD48-203ENST00000613788 INAFM1C9JVW0 142 aa11.88□□□□□ -0.51
CD48-203ENST00000613788 PROP1O75360 226 aa11.88□□□□□ -0.51
CD48-203ENST00000613788 IGLV2-14P01704 120 aa11.88□□□□□ -0.51
CD48-203ENST00000613788 SRD5A1P18405 259 aa11.88□□□□□ -0.51
CD48-203ENST00000613788 SLC6A1P30531 599 aa11.88□□□□□ -0.51
CD48-203ENST00000613788 BTCP35070 178 aa11.88□□□□□ -0.51
CD48-203ENST00000613788 REG1BP48304 166 aa11.88□□□□□ -0.51
CD48-203ENST00000613788 BAMBIQ13145 260 aa11.88□□□□□ -0.51
CD48-203ENST00000613788 DIAPH2-AS1Q14236 149 aa11.88□□□□□ -0.51
CD48-203ENST00000613788 ABCA11PQ4W5N1 156 aa11.88□□□□□ -0.51
CD48-203ENST00000613788 MOB3BQ86TA1 216 aa11.88□□□□□ -0.51
CD48-203ENST00000613788 BCL6BQ8N143 479 aaPredicted RBP11.88□□□□□ -0.51
CD48-203ENST00000613788 ZDHHC22Q8N966 263 aa11.88□□□□□ -0.51
CD48-203ENST00000613788 C17orf50Q8WW18 174 aa11.88□□□□□ -0.51
CD48-203ENST00000613788 C22orf15Q8WYQ4 148 aa11.88□□□□□ -0.51
CD48-203ENST00000613788 MRGPRFQ96AM1 343 aa11.88□□□□□ -0.51
CD48-203ENST00000613788 ADTRPQ96IZ2 230 aa11.88□□□□□ -0.51
CD48-203ENST00000613788 HSD17B10Q99714 261 aaKnown RBP11.88□□□□□ -0.51
CD48-203ENST00000613788 COPZ2Q9P299 210 aa11.88□□□□□ -0.51
CD48-203ENST00000613788 IGHV1-3A0A0C4DH29 117 aa11.87□□□□□ -0.51
CD48-203ENST00000613788 NDUFB6O95139 128 aa11.87□□□□□ -0.51
CD48-203ENST00000613788 CTSDP07339 412 aaPredicted RBP11.87□□□□□ -0.51
CD48-203ENST00000613788 BRS3P32247 399 aa11.87□□□□□ -0.51
CD48-203ENST00000613788 DEFB112Q30KQ8 113 aa11.87□□□□□ -0.51
CD48-203ENST00000613788 ZNF66Q6ZN08 573 aa11.87□□□□□ -0.51
CD48-203ENST00000613788 DYNAPQ8N1N2 210 aa11.87□□□□□ -0.51
CD48-203ENST00000613788 ENKURQ8TC29 256 aa11.87□□□□□ -0.51
CD48-203ENST00000613788 SOX21Q9Y651 276 aaPredicted RBP11.87□□□□□ -0.51
CD48-203ENST00000613788 HIVEP2P31629 2446 aa11.87□□□□□ -0.51
CD48-203ENST00000613788 RNF212BA8MTL3 300 aa11.86□□□□□ -0.51
CD48-203ENST00000613788 CT45A6P0DMU7 189 aa11.86□□□□□ -0.51
CD48-203ENST00000613788 CT45A5P0DMU8 189 aa11.86□□□□□ -0.51
CD48-203ENST00000613788 CT45A7P0DMV0 189 aa11.86□□□□□ -0.51
CD48-203ENST00000613788 MC5RP33032 325 aa11.86□□□□□ -0.51
CD48-203ENST00000613788 THBS3P49746 956 aa11.86□□□□□ -0.51
CD48-203ENST00000613788 TAGLNQ01995 201 aaKnown RBP11.86□□□□□ -0.51
CD48-203ENST00000613788 CCDC71LQ8N9Z2 235 aa11.86□□□□□ -0.51
CD48-203ENST00000613788 DRAXINQ8NBI3 349 aaPredicted RBP11.86□□□□□ -0.51
CD48-203ENST00000613788 ZDHHC16Q969W1 377 aa11.86□□□□□ -0.51
CD48-203ENST00000613788 NABP2Q9BQ15 211 aa11.86□□□□□ -0.51
CD48-203ENST00000613788 MRPL20Q9BYC9 149 aaKnown RBP11.86□□□□□ -0.51
CD48-203ENST00000613788 SLC2A9Q9NRM0 540 aa11.86□□□□□ -0.51
CD48-203ENST00000613788 PRELID3BQ9Y3B1 194 aa11.86□□□□□ -0.51
CD48-203ENST00000613788 TLN2Q9Y4G6 2542 aa11.86□□□□□ -0.51
CD48-203ENST00000613788 A0A1W2PPI3 338 aa11.86□□□□□ -0.51
CD48-203ENST00000613788 TIMM23O14925 209 aa11.86□□□□□ -0.51
CD48-203ENST00000613788 TNFSF12O43508 249 aa11.86□□□□□ -0.51
CD48-203ENST00000613788 PGLYRP1O75594 196 aaPredicted RBP11.86□□□□□ -0.51
CD48-203ENST00000613788 TCRBP04435 133 aa11.86□□□□□ -0.51
CD48-203ENST00000613788 PI3P19957 117 aa11.86□□□□□ -0.51
CD48-203ENST00000613788 DUTP33316 252 aaKnown RBP11.86□□□□□ -0.51
CD48-203ENST00000613788 PIGPP57054 158 aa11.86□□□□□ -0.51
CD48-203ENST00000613788 RND3P61587 244 aa11.86□□□□□ -0.51
CD48-203ENST00000613788 CATR1Q13166 79 aa11.86□□□□□ -0.51
CD48-203ENST00000613788 AANATQ16613 207 aa11.86□□□□□ -0.51
CD48-203ENST00000613788 PHLDA2Q53GA4 152 aa11.86□□□□□ -0.51
CD48-203ENST00000613788 C5orf30Q96GV9 206 aa11.86□□□□□ -0.51
CD48-203ENST00000613788 RTBDNQ9BSG5 229 aaPredicted RBP11.86□□□□□ -0.51
CD48-203ENST00000613788 PRDM13Q9H4Q3 707 aa11.86□□□□□ -0.51
CD48-203ENST00000613788 C5orf66Q9H5L9 145 aa11.86□□□□□ -0.51
CD48-203ENST00000613788 VSIG4Q9Y279 399 aa11.86□□□□□ -0.51
CD48-203ENST00000613788 CRLF1O75462 422 aa11.85□□□□□ -0.51
CD48-203ENST00000613788 APOA2P02652 100 aa11.85□□□□□ -0.51
CD48-203ENST00000613788 RLN1P04808 185 aa11.85□□□□□ -0.51
CD48-203ENST00000613788 PAX6P26367 422 aa11.85□□□□□ -0.51
CD48-203ENST00000613788 CD1BP29016 333 aa11.85□□□□□ -0.51
CD48-203ENST00000613788 DYNLT3P51808 116 aa11.85□□□□□ -0.51
CD48-203ENST00000613788 EIF4EBP1Q13541 118 aaPredicted RBP11.85□□□□□ -0.51
CD48-203ENST00000613788 LRRC75BQ2VPJ9 315 aa11.85□□□□□ -0.51
CD48-203ENST00000613788 RBMS3Q6XE24 437 aaKnown RBP11.85□□□□□ -0.51
CD48-203ENST00000613788 KCTD9Q7L273 389 aa11.85□□□□□ -0.51
CD48-203ENST00000613788 NRARPQ7Z6K4 114 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms