RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 WDFY3Q8IZQ1 3526 aa9.29□□□□□ -0.92
FAM3A-221ENST00000612856 CYB5R3P00387 301 aaPredicted RBP9.29□□□□□ -0.92
FAM3A-221ENST00000612856 GYPAP02724 150 aa9.29□□□□□ -0.92
FAM3A-221ENST00000612856 ZNF735P0CB33 412 aa9.29□□□□□ -0.92
FAM3A-221ENST00000612856 GPR12P47775 334 aa9.29□□□□□ -0.92
FAM3A-221ENST00000612856 CDC20BQ86Y33 519 aa9.29□□□□□ -0.92
FAM3A-221ENST00000612856 RNF133Q8WVZ7 376 aa9.29□□□□□ -0.92
FAM3A-221ENST00000612856 PLEKHA2Q9HB19 425 aa9.29□□□□□ -0.92
FAM3A-221ENST00000612856 STRAPQ9Y3F4 350 aaKnown RBP9.29□□□□□ -0.92
FAM3A-221ENST00000612856 TIMM8BQ9Y5J9 83 aaPredicted RBP9.29□□□□□ -0.92
FAM3A-221ENST00000612856 V9GYS6 101 aa9.29□□□□□ -0.92
FAM3A-221ENST00000612856 A0A1W2PNU3 283 aaPredicted RBP9.29□□□□□ -0.92
FAM3A-221ENST00000612856 SYNGR1O43759 233 aa9.29□□□□□ -0.92
FAM3A-221ENST00000612856 ZNF708P17019 499 aa9.29□□□□□ -0.92
FAM3A-221ENST00000612856 COL8A1P27658 744 aa9.29□□□□□ -0.92
FAM3A-221ENST00000612856 RELQ04864 619 aaPredicted RBP9.29□□□□□ -0.92
FAM3A-221ENST00000612856 LRRC10Q5BKY1 277 aa9.29□□□□□ -0.92
FAM3A-221ENST00000612856 LEAP2Q969E1 77 aa9.29□□□□□ -0.92
FAM3A-221ENST00000612856 WDYHV1Q96HA8 205 aa9.29□□□□□ -0.92
FAM3A-221ENST00000612856 TMEM208Q9BTX3 173 aa9.29□□□□□ -0.92
FAM3A-221ENST00000612856 SLC25A31Q9H0C2 315 aa9.29□□□□□ -0.92
FAM3A-221ENST00000612856 A0A1B0GWJ7 208 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 MSTNO14793 375 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 CHRM2P08172 466 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 BCL3P20749 454 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 FUT3P21217 361 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 NUBP1P53384 320 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 TLE4Q04727 773 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 ZNF266Q14584 549 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 ELOBQ15370 118 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 LINC00114Q6XXX2 140 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 LYZL2Q7Z4W2 148 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 RTN4IP1Q8WWV3 396 aaPredicted RBP9.28□□□□□ -0.92
FAM3A-221ENST00000612856 GALNT14Q96FL9 552 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 TRBV5-5A0A0J9YX44 114 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 VSIG8P0DPA2 414 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 LHX2P50458 406 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 OR10A7Q8NGE5 316 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 BTF3L4Q96K17 158 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 ATRQ13535 2644 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 PRRC2AP48634 2157 aaKnown RBP9.28□□□□□ -0.92
FAM3A-221ENST00000612856 IGLV1-36A0A0B4J1U3 117 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 M0R1X1 148 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 WISP2O76076 250 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 CECR9P0C854 216 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 WNT5AP41221 380 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 TAS2R46P59540 309 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 P2RY6Q15077 328 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 C10orf91Q5T1B1 145 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 PRAMEF5Q5TYX0 476 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 OR5C1Q8NGR4 320 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 FGFBP3Q8TAT2 258 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 SNHG12Q9BXW3 62 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 GLRX2Q9NS18 164 aa9.28□□□□□ -0.92
FAM3A-221ENST00000612856 IFITM10A6NMD0 228 aa9.27□□□□□ -0.92
FAM3A-221ENST00000612856 WNT9BO14905 357 aa9.27□□□□□ -0.92
FAM3A-221ENST00000612856 CHRNB4P30926 498 aa9.27□□□□□ -0.92
FAM3A-221ENST00000612856 RPH3ALQ9UNE2 315 aa9.27□□□□□ -0.92
FAM3A-221ENST00000612856 TRGV10A0A0A0MS01 117 aa9.27□□□□□ -0.93
FAM3A-221ENST00000612856 MARCH11A6NNE9 402 aa9.27□□□□□ -0.93
FAM3A-221ENST00000612856 OR5AC1P0C628 307 aa9.27□□□□□ -0.93
FAM3A-221ENST00000612856 ATP6V0CP27449 155 aa9.27□□□□□ -0.93
FAM3A-221ENST00000612856 CLDN18P56856 261 aa9.27□□□□□ -0.93
FAM3A-221ENST00000612856 KRTDAPP60985 99 aa9.27□□□□□ -0.93
FAM3A-221ENST00000612856 BSPH1Q075Z2 132 aa9.27□□□□□ -0.93
FAM3A-221ENST00000612856 INO80CQ6PI98 192 aaPredicted RBP9.27□□□□□ -0.93
FAM3A-221ENST00000612856 ERASQ7Z444 233 aa9.27□□□□□ -0.93
FAM3A-221ENST00000612856 MUC15Q8N387 334 aa9.27□□□□□ -0.93
FAM3A-221ENST00000612856 KLF14Q8TD94 323 aaPredicted RBP9.27□□□□□ -0.93
FAM3A-221ENST00000612856 RAB1CQ92928 201 aa9.27□□□□□ -0.93
FAM3A-221ENST00000612856 RBMXL1Q96E39 390 aaKnown RBP9.27□□□□□ -0.93
FAM3A-221ENST00000612856 MS4A5Q9H3V2 200 aa9.27□□□□□ -0.93
FAM3A-221ENST00000612856 SLC17A5Q9NRA2 495 aa9.27□□□□□ -0.93
FAM3A-221ENST00000612856 CLN8Q9UBY8 286 aa9.27□□□□□ -0.93
FAM3A-221ENST00000612856 DOCK11Q5JSL3 2073 aa9.27□□□□□ -0.93
FAM3A-221ENST00000612856 FPR2P25090 351 aa9.27□□□□□ -0.93
FAM3A-221ENST00000612856 CHRNA7P36544 502 aa9.27□□□□□ -0.93
FAM3A-221ENST00000612856 CEACAM6P40199 344 aa9.27□□□□□ -0.93
FAM3A-221ENST00000612856 FAM3AP98173 230 aa9.27□□□□□ -0.93
FAM3A-221ENST00000612856 VAMP3Q15836 100 aa9.27□□□□□ -0.93
FAM3A-221ENST00000612856 ZNF260Q3ZCT1 412 aa9.27□□□□□ -0.93
FAM3A-221ENST00000612856 FNDC7Q5VTL7 733 aa9.27□□□□□ -0.93
FAM3A-221ENST00000612856 BAGE3Q86Y29 109 aa9.27□□□□□ -0.93
FAM3A-221ENST00000612856 BAGE2Q86Y30 109 aa9.27□□□□□ -0.93
FAM3A-221ENST00000612856 DNAJC4Q9NNZ3 241 aa9.27□□□□□ -0.93
FAM3A-221ENST00000612856 A8MWP6 167 aa9.26□□□□□ -0.93
FAM3A-221ENST00000612856 THBS4P35443 961 aa9.26□□□□□ -0.93
FAM3A-221ENST00000612856 NKX2-1P43699 371 aaPredicted RBP9.26□□□□□ -0.93
FAM3A-221ENST00000612856 CATR1Q13166 79 aa9.26□□□□□ -0.93
FAM3A-221ENST00000612856 PNLIPRP3Q17RR3 467 aa9.26□□□□□ -0.93
FAM3A-221ENST00000612856 DPPA3Q6W0C5 159 aa9.26□□□□□ -0.93
FAM3A-221ENST00000612856 OR1K1Q8NGR3 316 aa9.26□□□□□ -0.93
FAM3A-221ENST00000612856 OR13D1Q8NGV5 346 aa9.26□□□□□ -0.93
FAM3A-221ENST00000612856 OR1P1Q8NH06 330 aa9.26□□□□□ -0.93
FAM3A-221ENST00000612856 WNT5BQ9H1J7 359 aa9.26□□□□□ -0.93
FAM3A-221ENST00000612856 GNB4Q9HAV0 340 aa9.26□□□□□ -0.93
FAM3A-221ENST00000612856 GPR132Q9UNW8 380 aa9.26□□□□□ -0.93
FAM3A-221ENST00000612856 ZNF320A2RRD8 509 aa9.26□□□□□ -0.93
FAM3A-221ENST00000612856 DANCRP0C864 163 aa9.26□□□□□ -0.93
FAM3A-221ENST00000612856 IGHV1-2P23083 117 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms