RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 MAFIPQ8WZ33 124 aa11.33□□□□□ -0.6
HDDC2-209ENST00000609477 GON7Q9BXV9 100 aa11.33□□□□□ -0.6
HDDC2-209ENST00000609477 PKD1L1Q8TDX9 2849 aa11.32□□□□□ -0.6
HDDC2-209ENST00000609477 IGKV1D-8A0A087WSZ0 117 aa11.32□□□□□ -0.6
HDDC2-209ENST00000609477 PROP1O75360 226 aa11.32□□□□□ -0.6
HDDC2-209ENST00000609477 TPPPO94811 219 aa11.32□□□□□ -0.6
HDDC2-209ENST00000609477 OR8U9P0C7N5 309 aa11.32□□□□□ -0.6
HDDC2-209ENST00000609477 ZNF182P17025 639 aaPredicted RBP11.32□□□□□ -0.6
HDDC2-209ENST00000609477 ACTBP60709 375 aa11.32□□□□□ -0.6
HDDC2-209ENST00000609477 C9orf152Q5JTZ5 239 aa11.32□□□□□ -0.6
HDDC2-209ENST00000609477 TMEM69Q5SWH9 247 aa11.32□□□□□ -0.6
HDDC2-209ENST00000609477 SLC35E3Q7Z769 313 aa11.32□□□□□ -0.6
HDDC2-209ENST00000609477 BEST4Q8NFU0 473 aa11.32□□□□□ -0.6
HDDC2-209ENST00000609477 OR5AU1Q8NGC0 362 aa11.32□□□□□ -0.6
HDDC2-209ENST00000609477 OR8U1Q8NH10 309 aa11.32□□□□□ -0.6
HDDC2-209ENST00000609477 ZNF580Q9UK33 172 aa11.32□□□□□ -0.6
HDDC2-209ENST00000609477 RNF150Q9ULK6 438 aa11.32□□□□□ -0.6
HDDC2-209ENST00000609477 WASHC3Q9Y3C0 194 aa11.32□□□□□ -0.6
HDDC2-209ENST00000609477 OR2W1Q9Y3N9 320 aa11.32□□□□□ -0.6
HDDC2-209ENST00000609477 RBM7Q9Y580 266 aaKnown RBP11.32□□□□□ -0.6
HDDC2-209ENST00000609477 TET2Q6N021 2002 aaPredicted RBP11.31□□□□□ -0.6
HDDC2-209ENST00000609477 H0YJW9 148 aa11.31□□□□□ -0.6
HDDC2-209ENST00000609477 AP4M1O00189 453 aa11.31□□□□□ -0.6
HDDC2-209ENST00000609477 NBR2O15453 112 aa11.31□□□□□ -0.6
HDDC2-209ENST00000609477 NDUFA3O95167 84 aa11.31□□□□□ -0.6
HDDC2-209ENST00000609477 SOX6P35712 828 aa11.31□□□□□ -0.6
HDDC2-209ENST00000609477 F2RL1P55085 397 aa11.31□□□□□ -0.6
HDDC2-209ENST00000609477 MMDQ15546 238 aa11.31□□□□□ -0.6
HDDC2-209ENST00000609477 TREML4Q6UXN2 200 aa11.31□□□□□ -0.6
HDDC2-209ENST00000609477 NDUFA11Q86Y39 141 aa11.31□□□□□ -0.6
HDDC2-209ENST00000609477 PDPNQ86YL7 162 aa11.31□□□□□ -0.6
HDDC2-209ENST00000609477 COMMD1Q8N668 190 aa11.31□□□□□ -0.6
HDDC2-209ENST00000609477 OR4X2Q8NGF9 303 aa11.31□□□□□ -0.6
HDDC2-209ENST00000609477 ADTRPQ96IZ2 230 aa11.31□□□□□ -0.6
HDDC2-209ENST00000609477 NAA50Q9GZZ1 169 aaKnown RBP11.31□□□□□ -0.6
HDDC2-209ENST00000609477 OR2D2Q9H210 308 aa11.31□□□□□ -0.6
HDDC2-209ENST00000609477 MMP27Q9H306 513 aa11.31□□□□□ -0.6
HDDC2-209ENST00000609477 KIAA1456Q9P272 454 aa11.31□□□□□ -0.6
HDDC2-209ENST00000609477 COMMD3Q9UBI1 195 aa11.31□□□□□ -0.6
HDDC2-209ENST00000609477 H7C2Y5 167 aa11.3□□□□□ -0.6
HDDC2-209ENST00000609477 HLA-DRB1P01911 266 aa11.3□□□□□ -0.6
HDDC2-209ENST00000609477 HLA-DQB1P01920 261 aa11.3□□□□□ -0.6
HDDC2-209ENST00000609477 APOA2P02652 100 aa11.3□□□□□ -0.6
HDDC2-209ENST00000609477 OPN1MWP04001 364 aa11.3□□□□□ -0.6
HDDC2-209ENST00000609477 OPN1MW2P0DN77 364 aa11.3□□□□□ -0.6
HDDC2-209ENST00000609477 OPN1MW3P0DN78 364 aa11.3□□□□□ -0.6
HDDC2-209ENST00000609477 RRASP10301 218 aa11.3□□□□□ -0.6
HDDC2-209ENST00000609477 LUMP51884 338 aaPredicted RBP11.3□□□□□ -0.6
HDDC2-209ENST00000609477 TAS2R20P59543 309 aa11.3□□□□□ -0.6
HDDC2-209ENST00000609477 ARPC4P59998 168 aa11.3□□□□□ -0.6
HDDC2-209ENST00000609477 SLC35B1P78383 322 aa11.3□□□□□ -0.6
HDDC2-209ENST00000609477 CD83Q01151 205 aa11.3□□□□□ -0.6
HDDC2-209ENST00000609477 TMEM95Q3KNT9 176 aa11.3□□□□□ -0.6
HDDC2-209ENST00000609477 FAM131AQ6UXB0 335 aa11.3□□□□□ -0.6
HDDC2-209ENST00000609477 C15orf40Q8WUR7 153 aa11.3□□□□□ -0.6
HDDC2-209ENST00000609477 NECAP2Q9NVZ3 263 aa11.3□□□□□ -0.6
HDDC2-209ENST00000609477 SDHAF2Q9NX18 166 aa11.3□□□□□ -0.6
HDDC2-209ENST00000609477 SCOCQ9UIL1 159 aa11.3□□□□□ -0.6
HDDC2-209ENST00000609477 PSMB11A5LHX3 300 aa11.29□□□□□ -0.6
HDDC2-209ENST00000609477 TUSC2O75896 110 aa11.29□□□□□ -0.6
HDDC2-209ENST00000609477 SPDEFO95238 335 aa11.29□□□□□ -0.6
HDDC2-209ENST00000609477 IGF1P05019 195 aa11.29□□□□□ -0.6
HDDC2-209ENST00000609477 CSF1P09603 554 aa11.29□□□□□ -0.6
HDDC2-209ENST00000609477 PRSS3P35030 304 aa11.29□□□□□ -0.6
HDDC2-209ENST00000609477 LGALS7P47929 136 aa11.29□□□□□ -0.6
HDDC2-209ENST00000609477 THBS3P49746 956 aa11.29□□□□□ -0.6
HDDC2-209ENST00000609477 CBX3Q13185 183 aa11.29□□□□□ -0.6
HDDC2-209ENST00000609477 MSMO1Q15800 293 aa11.29□□□□□ -0.6
HDDC2-209ENST00000609477 C5orf64Q2M2E5 130 aa11.29□□□□□ -0.6
HDDC2-209ENST00000609477 LIN54Q6MZP7 749 aa11.29□□□□□ -0.6
HDDC2-209ENST00000609477 CLVS1Q8IUQ0 354 aaPredicted RBP11.29□□□□□ -0.6
HDDC2-209ENST00000609477 ZNF645Q8N7E2 425 aa11.29□□□□□ -0.6
HDDC2-209ENST00000609477 OR5AP2Q8NGF4 316 aa11.29□□□□□ -0.6
HDDC2-209ENST00000609477 TSNAXQ99598 290 aaKnown RBP11.29□□□□□ -0.6
HDDC2-209ENST00000609477 SCPEP1Q9HB40 452 aa11.29□□□□□ -0.6
HDDC2-209ENST00000609477 IFT46Q9NQC8 304 aa11.29□□□□□ -0.6
HDDC2-209ENST00000609477 ADAM30Q9UKF2 790 aa11.29□□□□□ -0.6
HDDC2-209ENST00000609477 TRRAPQ9Y4A5 3859 aa11.28□□□□□ -0.6
HDDC2-209ENST00000609477 SH2D7A6NKC9 451 aaPredicted RBP11.28□□□□□ -0.6
HDDC2-209ENST00000609477 M0R1X1 148 aa11.28□□□□□ -0.6
HDDC2-209ENST00000609477 SULT1C2O00338 296 aa11.28□□□□□ -0.6
HDDC2-209ENST00000609477 NOL3O60936 208 aaKnown RBP11.28□□□□□ -0.6
HDDC2-209ENST00000609477 EIF4EP06730 217 aaKnown RBP11.28□□□□□ -0.6
HDDC2-209ENST00000609477 OR5H8P0DN80 308 aa11.28□□□□□ -0.6
HDDC2-209ENST00000609477 CD28P10747 220 aa11.28□□□□□ -0.6
HDDC2-209ENST00000609477 NAT1P18440 290 aa11.28□□□□□ -0.6
HDDC2-209ENST00000609477 STPG2Q8N412 459 aa11.28□□□□□ -0.6
HDDC2-209ENST00000609477 GVQW1Q8N7I0 195 aa11.28□□□□□ -0.6
HDDC2-209ENST00000609477 ZNF383Q8NA42 475 aa11.28□□□□□ -0.6
HDDC2-209ENST00000609477 GIMAP1Q8WWP7 306 aa11.28□□□□□ -0.6
HDDC2-209ENST00000609477 FLYWCH2Q96CP2 140 aaKnown RBP11.28□□□□□ -0.6
HDDC2-209ENST00000609477 ZNF107Q9UII5 783 aaPredicted RBP11.28□□□□□ -0.6
HDDC2-209ENST00000609477 ANAPC10Q9UM13 185 aa11.28□□□□□ -0.6
HDDC2-209ENST00000609477 TSSC4Q9Y5U2 329 aaPredicted RBP11.28□□□□□ -0.6
HDDC2-209ENST00000609477 RRHO14718 337 aa11.27□□□□□ -0.61
HDDC2-209ENST00000609477 ELK1P19419 428 aa11.27□□□□□ -0.61
HDDC2-209ENST00000609477 NFYAP23511 347 aaPredicted RBP11.27□□□□□ -0.61
HDDC2-209ENST00000609477 SLC6A1P30531 599 aa11.27□□□□□ -0.61
HDDC2-209ENST00000609477 TAS2R46P59540 309 aa11.27□□□□□ -0.61
HDDC2-209ENST00000609477 CDK10Q15131 360 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms