RNA–Protein interactions for RNA: ENST00000604922.1

SH3D19-213, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-213ENST00000604922 KCNE3Q9Y6H6 103 aa2.4□□□□□ -2.03
SH3D19-213ENST00000604922 LRP1Q07954 4544 aaKnown RBP2.4□□□□□ -2.03
SH3D19-213ENST00000604922 TRAV38-1A0A0B4J264 116 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 GNG14A0A1W2PPG7 69 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 C5orf49A4QMS7 147 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 METTL21EPA6NDL7 271 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 FTCDNL1E5RQL4 147 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 H3BSH0 61 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 CCRL2O00421 344 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 FAAHO00519 579 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 ARPC3O15145 178 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 SCN2BO60939 215 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 GYPAP02724 150 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 HMGN2P05204 90 aaKnown RBP2.39□□□□□ -2.03
SH3D19-213ENST00000604922 TFPTP0C1Z6 253 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 GGT2P36268 569 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 RPL13AP40429 203 aaKnown RBP2.39□□□□□ -2.03
SH3D19-213ENST00000604922 C2orf80Q0P641 193 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 OR5I1Q13606 314 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 C1DQ13901 141 aaKnown RBP2.39□□□□□ -2.03
SH3D19-213ENST00000604922 MAPK14Q16539 360 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 PABPC1L2AQ5JQF8 200 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 CFAP157Q5JU67 520 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 SPANXN3Q5MJ09 141 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 Q5VSD8 79 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 ZNF679Q8IYX0 411 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 COMMD1Q8N668 190 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 OR5D13Q8NGL4 314 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 OR13G1Q8NGZ3 307 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 MFSD8Q8NHS3 518 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 STAG3L4Q8TBR4 150 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 EMG1Q92979 244 aaKnown RBP2.39□□□□□ -2.03
SH3D19-213ENST00000604922 SDF2Q99470 211 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 CHP1Q99653 195 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 CCT7Q99832 543 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 ERP44Q9BS26 406 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 EMC6Q9BV81 110 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 TUBA4BQ9H853 241 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 NMRK1Q9NWW6 199 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 BLOC1S6Q9UL45 172 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 SLC35A3Q9Y2D2 325 aa2.39□□□□□ -2.03
SH3D19-213ENST00000604922 A0A1B0GVX0 72 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 F5H5P2 479 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 RBFOX2O43251 390 aaKnown RBP eCLIP2.38□□□□□ -2.03
SH3D19-213ENST00000604922 DIRAS1O95057 198 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 FARS2O95363 451 aaKnown RBP2.38□□□□□ -2.03
SH3D19-213ENST00000604922 PGA5P0DJD9 388 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 DBTP11182 482 aaKnown RBP2.38□□□□□ -2.03
SH3D19-213ENST00000604922 NCF2P19878 526 aaPredicted RBP2.38□□□□□ -2.03
SH3D19-213ENST00000604922 GSTM3P21266 225 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 TUBG1P23258 451 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 CXCR1P25024 350 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 KIR3DL2P43630 455 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 GDI2P50395 445 aaKnown RBP2.38□□□□□ -2.03
SH3D19-213ENST00000604922 ERFP50548 548 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 TCTAP57738 103 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 UBE2HP62256 183 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 TNFRSF9Q07011 255 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 BNIP2Q12982 314 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 AQP6Q13520 282 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 LGALS9BQ3B8N2 356 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 SLC36A2Q495M3 483 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 SPIN4Q56A73 249 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 LDLRAD2Q5SZI1 272 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 HES5Q5TA89 166 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 C1orf140Q5VVS0 124 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 CNIH2Q6PI25 160 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 SLC16A14Q7RTX9 510 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 MREGQ8N565 214 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 DRAM1Q8N682 238 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 OR8G5Q8NG78 346 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 OR4F6Q8NGB9 312 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 OR4K5Q8NGD3 323 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 OR11L1Q8NGX0 322 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 OR6N1Q8NGY5 312 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 C4orf3Q8WVX3 66 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 TMEM54Q969K7 222 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 TMEM106AQ96A25 262 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 CIDECQ96AQ7 238 aaPredicted RBP2.38□□□□□ -2.03
SH3D19-213ENST00000604922 CMBLQ96DG6 245 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 MALSU1Q96EH3 234 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 CHMP6Q96FZ7 201 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 CCDC42Q96M95 316 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 IQCGQ9H095 443 aaKnown RBP2.38□□□□□ -2.03
SH3D19-213ENST00000604922 TUBG2Q9NRH3 451 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 TFR2Q9UP52 801 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 POLDIP2Q9Y2S7 368 aa2.38□□□□□ -2.03
SH3D19-213ENST00000604922 CLDN24A6NM45 220 aa2.37□□□□□ -2.03
SH3D19-213ENST00000604922 SYCE1LA8MT33 242 aa2.37□□□□□ -2.03
SH3D19-213ENST00000604922 M0R2N4 97 aa2.37□□□□□ -2.03
SH3D19-213ENST00000604922 OVOL1O14753 267 aa2.37□□□□□ -2.03
SH3D19-213ENST00000604922 AIM2O14862 343 aa2.37□□□□□ -2.03
SH3D19-213ENST00000604922 BANF1O75531 89 aa2.37□□□□□ -2.03
SH3D19-213ENST00000604922 CD200P41217 278 aa2.37□□□□□ -2.03
SH3D19-213ENST00000604922 CSNK1A1P48729 337 aa2.37□□□□□ -2.03
SH3D19-213ENST00000604922 ELF3P78545 371 aaPredicted RBP2.37□□□□□ -2.03
SH3D19-213ENST00000604922 PSG4Q00888 419 aa2.37□□□□□ -2.03
SH3D19-213ENST00000604922 ERCC8Q13216 396 aa2.37□□□□□ -2.03
SH3D19-213ENST00000604922 OR8B8Q15620 311 aa2.37□□□□□ -2.03
SH3D19-213ENST00000604922 SSX2Q16385 188 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms