RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 RTBDNQ9BSG5 229 aaPredicted RBP4.02□□□□□ -1.77
LINC01109-201ENST00000603837 SAMD10Q9BYL1 202 aa4.02□□□□□ -1.77
LINC01109-201ENST00000603837 TTTY10Q9BZA0 68 aa4.02□□□□□ -1.77
LINC01109-201ENST00000603837 JKAMPQ9P055 326 aa4.02□□□□□ -1.77
LINC01109-201ENST00000603837 ZNF780BQ9Y6R6 833 aa4.02□□□□□ -1.77
LINC01109-201ENST00000603837 GON4LQ3T8J9 2241 aa4.02□□□□□ -1.77
LINC01109-201ENST00000603837 TRAV8-6A0A0B4J262 113 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 A0A0G2JMM0 328 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 KBTBD11-OT1A0A1B0GTJ5 212 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 A0A1W2PPB8 328 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 GAGE12HA6NDE8 117 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 KIR3DP1A8MWS1 328 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 E9PLN8 166 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 J3QR06 171 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 HMGB3O15347 200 aaKnown RBP4.01□□□□□ -1.77
LINC01109-201ENST00000603837 PIN1P1O15428 100 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 GPR137BO60478 399 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 TTRP02766 147 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 ERGP11308 486 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 PRPH2P23942 346 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 TAS2R31P59538 309 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 RPS11P62280 158 aaKnown RBP eCLIP4.01□□□□□ -1.77
LINC01109-201ENST00000603837 TAL2Q16559 108 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 TBC1D28Q2M2D7 210 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 FAM78BQ5VT40 261 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 OR8G5Q8NG78 346 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 OR4D11Q8NGI4 311 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 GALMQ96C23 342 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 ZNF681Q96N22 645 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 SIGLEC12Q96PQ1 595 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 VKORC1Q9BQB6 163 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 VN1R1Q9GZP7 353 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 SH3BGRL3Q9H299 93 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 SDF2L1Q9HCN8 221 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 HSPB8Q9UJY1 196 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 TIMM13Q9Y5L4 95 aaPredicted RBP4.01□□□□□ -1.77
LINC01109-201ENST00000603837 COL6A3P12111 3177 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 PLXNA3P51805 1871 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 M0R1X1 148 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 ERI3O43414 337 aaKnown RBP4.01□□□□□ -1.77
LINC01109-201ENST00000603837 CHST1O43916 411 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 NPIPB7O75200 414 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 STK17BO94768 372 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 CLDN1O95832 211 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 PRTN3P24158 256 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 OR3A4PP47883 348 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 SIRPAP78324 504 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 ZNF85Q03923 595 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 C1orf61Q13536 156 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 MSMO1Q15800 293 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 POM121L1PQ3SYA9 428 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 CD300EQ496F6 205 aaPredicted RBP4.01□□□□□ -1.77
LINC01109-201ENST00000603837 DEFB125Q8N687 156 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 MORN4Q8NDC4 146 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 OR51G1Q8NGK1 321 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 RNF183Q96D59 192 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 UHRF2Q96PU4 802 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 ADOQ96SZ5 270 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 PDCD1LG2Q9BQ51 273 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 AP5S1Q9NUS5 200 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 IL36GQ9NZH8 169 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 VDAC3Q9Y277 283 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 RCL1Q9Y2P8 373 aaKnown RBP4.01□□□□□ -1.77
LINC01109-201ENST00000603837 POLDIP2Q9Y2S7 368 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 KIAA1671Q9BY89 1806 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 SDK1Q7Z5N4 2213 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 A0A1W2PRE2 83 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 CASTOR2A6NHX0 329 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 NPIPB6E9PJ23 425 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 PHF1O43189 567 aaPredicted RBP4.01□□□□□ -1.77
LINC01109-201ENST00000603837 HRASP01112 189 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 ISG15P05161 165 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 CPMP14384 443 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 ZNF708P17019 499 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 P2RY1P47900 373 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 PPOXP50336 477 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 PLCXD2Q0VAA5 305 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 ADIRFQ15847 76 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 TMEM215Q68D42 235 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 SBSNQ6UWP8 590 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 LINC00336Q6ZUF6 198 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 OR10G4Q8NGN3 311 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 OR2T10Q8NGZ9 312 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 C16orf52Q8NHV5 167 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 C2orf15Q8WU43 125 aaKnown RBP4.01□□□□□ -1.77
LINC01109-201ENST00000603837 ZC2HC1AQ96GY0 325 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 LIN37Q96GY3 246 aaPredicted RBP4.01□□□□□ -1.77
LINC01109-201ENST00000603837 GRAMD2BQ96HH9 432 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 Q96MF0 132 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 PAAF1Q9BRP4 392 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 LRRC61Q9BV99 259 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 SLC25A51Q9H1U9 297 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 MOB1AQ9H8S9 216 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 NPVFQ9HCQ7 196 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 MRPL16Q9NX20 251 aaKnown RBP4.01□□□□□ -1.77
LINC01109-201ENST00000603837 AK3Q9UIJ7 227 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 LSM7Q9UK45 103 aaKnown RBP4.01□□□□□ -1.77
LINC01109-201ENST00000603837 KLHDC2Q9Y2U9 406 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 WASHC3Q9Y3C0 194 aa4.01□□□□□ -1.77
LINC01109-201ENST00000603837 LSM5Q9Y4Y9 91 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms