RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 TMUB2Q71RG4 321 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 LYG2Q86SG7 212 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 ANGPTL5Q86XS5 388 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 IZUMO1Q8IYV9 350 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 DYNAPQ8N1N2 210 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 TPRX1Q8N7U7 411 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 POC1AQ8NBT0 407 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 KLHL30-AS1Q8NEE0 82 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 OR56B1Q8NGI3 324 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 OR5A2Q8NGI9 324 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 OR51A4Q8NGJ6 313 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 OR51S1Q8NGJ8 323 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 SUN5Q8TC36 379 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 MITD1Q8WV92 249 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 EMG1Q92979 244 aaKnown RBP4.17□□□□□ -1.74
VRK3-226ENST00000602029 RBPMSQ93062 196 aaKnown RBP4.17□□□□□ -1.74
VRK3-226ENST00000602029 SDSLQ96GA7 329 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 LYZL4Q96KX0 146 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 ASCL2Q99929 193 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 SLC25A33Q9BSK2 321 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 MCRIP2Q9BUT9 160 aaKnown RBP4.17□□□□□ -1.74
VRK3-226ENST00000602029 CLEC7AQ9BXN2 247 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 NMES1Q9C002 83 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 CHST6Q9GZX3 395 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 PBOV1Q9GZY1 135 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 OR51I2Q9H344 312 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 GPR84Q9NQS5 396 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 PCDHB16Q9NRJ7 776 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 TAS2R4Q9NYW5 299 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 U3KQK5 164 aa4.17□□□□□ -1.74
VRK3-226ENST00000602029 TRGV10A0A0A0MS01 117 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 KANTRA0A1W2PQU2 76 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 PSMB11A5LHX3 300 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 DBX1A6NMT0 343 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 TEX46H3BTG2 121 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 RAB27BO00194 218 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 BCL2L11O43521 198 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 MPC2O95563 127 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 AMY2AP04746 511 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 RLN1P04808 185 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 IFNA6P05013 189 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 FCER2P06734 321 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 ZNF735P0CB33 412 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 IGHV1-8P0DP01 117 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 ANXA7P20073 488 aaKnown RBP4.16□□□□□ -1.74
VRK3-226ENST00000602029 NFYBP25208 207 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 ZNF93P35789 620 aaPredicted RBP4.16□□□□□ -1.74
VRK3-226ENST00000602029 CEACAM3P40198 252 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 OR3A4PP47883 348 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 H2BFSP57053 126 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 KRTAP10-11P60412 298 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 TAGLNQ01995 201 aaKnown RBP4.16□□□□□ -1.74
VRK3-226ENST00000602029 MFGE8Q08431 387 aaPredicted RBP4.16□□□□□ -1.74
VRK3-226ENST00000602029 DHRS2Q13268 280 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 MADCAM1Q13477 382 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 HNF4GQ14541 408 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 TMEM128Q5BJH2 165 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 PRAMEF5Q5TYX0 476 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 ACOT7LQ6ZUV0 252 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 ZNF329Q86UD4 541 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 COMMD7Q86VX2 200 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 Q8N2B8 174 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 FAM89BQ8N5H3 189 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 KCNRGQ8N5I3 272 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 JAGN1Q8N5M9 183 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 BEST4Q8NFU0 473 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 OR10R2Q8NGX6 335 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 OR10AC1Q8NH08 325 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 STOML3Q8TAV4 291 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 PIFOQ8TCI5 191 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 SLAMF9Q96A28 289 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 SPSB1Q96BD6 273 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 MRPS24Q96EL2 167 aaKnown RBP4.16□□□□□ -1.74
VRK3-226ENST00000602029 CITED4Q96RK1 184 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 B9D2Q9BPU9 175 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 SEC22CQ9BRL7 303 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 DPCDQ9BVM2 203 aaPredicted RBP4.16□□□□□ -1.74
VRK3-226ENST00000602029 TM2D1Q9BX74 207 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 FGF23Q9GZV9 251 aaPredicted RBP4.16□□□□□ -1.74
VRK3-226ENST00000602029 IFT46Q9NQC8 304 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 ZFP57Q9NU63 452 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 GAR1Q9NY12 217 aaKnown RBP4.16□□□□□ -1.74
VRK3-226ENST00000602029 TNFSF18Q9UNG2 199 aa4.16□□□□□ -1.74
VRK3-226ENST00000602029 TRBV6-7A0A0A0MS04 114 aa4.15□□□□□ -1.75
VRK3-226ENST00000602029 IGHV2-26A0A0B4J1V2 119 aa4.15□□□□□ -1.75
VRK3-226ENST00000602029 RAB19A4D1S5 217 aa4.15□□□□□ -1.75
VRK3-226ENST00000602029 RNF222A6NCQ9 220 aa4.15□□□□□ -1.75
VRK3-226ENST00000602029 MFSD2BA6NFX1 497 aa4.15□□□□□ -1.75
VRK3-226ENST00000602029 OR5H14A6NHG9 310 aa4.15□□□□□ -1.75
VRK3-226ENST00000602029 ADARB2-AS1A8MUL3 147 aa4.15□□□□□ -1.75
VRK3-226ENST00000602029 SMLR1H3BR10 107 aa4.15□□□□□ -1.75
VRK3-226ENST00000602029 I3L521 148 aa4.15□□□□□ -1.75
VRK3-226ENST00000602029 SIRPB1O00241 398 aa4.15□□□□□ -1.75
VRK3-226ENST00000602029 GOSR2O14653 212 aa4.15□□□□□ -1.75
VRK3-226ENST00000602029 TAAR5O14804 337 aa4.15□□□□□ -1.75
VRK3-226ENST00000602029 ARPC5O15511 151 aa4.15□□□□□ -1.75
VRK3-226ENST00000602029 TSC22D2O75157 780 aa4.15□□□□□ -1.75
VRK3-226ENST00000602029 DHRS3O75911 302 aa4.15□□□□□ -1.75
VRK3-226ENST00000602029 HAND1O96004 215 aa4.15□□□□□ -1.75
VRK3-226ENST00000602029 HLA-AP01891 365 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms