RNA–Protein interactions for RNA: ENST00000601689.1

UPF1-212, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-212ENST00000601689 TMEM69Q5SWH9 247 aa15.37■□□□□ 0.05
UPF1-212ENST00000601689 GPR107Q5VW38 600 aa15.37■□□□□ 0.05
UPF1-212ENST00000601689 NDUFA11Q86Y39 141 aa15.37■□□□□ 0.05
UPF1-212ENST00000601689 Q8N9W7 124 aa15.37■□□□□ 0.05
UPF1-212ENST00000601689 OR8U1Q8NH10 309 aa15.37■□□□□ 0.05
UPF1-212ENST00000601689 SLC25A38Q96DW6 304 aa15.37■□□□□ 0.05
UPF1-212ENST00000601689 CMTM3Q96MX0 182 aa15.37■□□□□ 0.05
UPF1-212ENST00000601689 RNF5Q99942 180 aa15.37■□□□□ 0.05
UPF1-212ENST00000601689 OR2D2Q9H210 308 aa15.37■□□□□ 0.05
UPF1-212ENST00000601689 GAB2Q9UQC2 676 aa15.37■□□□□ 0.05
UPF1-212ENST00000601689 NBR2O15453 112 aa15.36■□□□□ 0.05
UPF1-212ENST00000601689 SLC22A5O76082 557 aa15.36■□□□□ 0.05
UPF1-212ENST00000601689 PLGLAQ15195 96 aa15.36■□□□□ 0.05
UPF1-212ENST00000601689 FBLN7Q53RD9 439 aa15.36■□□□□ 0.05
UPF1-212ENST00000601689 FAM131AQ6UXB0 335 aa15.36■□□□□ 0.05
UPF1-212ENST00000601689 COMMD1Q8N668 190 aa15.36■□□□□ 0.05
UPF1-212ENST00000601689 OR4F17Q8NGA8 305 aa15.36■□□□□ 0.05
UPF1-212ENST00000601689 OR4F4Q96R69 305 aa15.36■□□□□ 0.05
UPF1-212ENST00000601689 IFT46Q9NQC8 304 aa15.36■□□□□ 0.05
UPF1-212ENST00000601689 COMMD3Q9UBI1 195 aa15.36■□□□□ 0.05
UPF1-212ENST00000601689 ANXA10Q9UJ72 324 aa15.36■□□□□ 0.05
UPF1-212ENST00000601689 ELF5Q9UKW6 265 aaPredicted RBP15.36■□□□□ 0.05
UPF1-212ENST00000601689 TCRBV4S1A1TA0A5B7 111 aa15.35■□□□□ 0.05
UPF1-212ENST00000601689 M0R1X1 148 aa15.35■□□□□ 0.05
UPF1-212ENST00000601689 GABARAPO95166 117 aa15.35■□□□□ 0.05
UPF1-212ENST00000601689 CT45A6P0DMU7 189 aa15.35■□□□□ 0.05
UPF1-212ENST00000601689 CT45A5P0DMU8 189 aa15.35■□□□□ 0.05
UPF1-212ENST00000601689 CT45A7P0DMV0 189 aa15.35■□□□□ 0.05
UPF1-212ENST00000601689 CD28P10747 220 aa15.35■□□□□ 0.05
UPF1-212ENST00000601689 NSUN5P1Q3KNT7 163 aa15.35■□□□□ 0.05
UPF1-212ENST00000601689 KHDC1LQ5JSQ8 128 aa15.35■□□□□ 0.05
UPF1-212ENST00000601689 PDPNQ86YL7 162 aa15.35■□□□□ 0.05
UPF1-212ENST00000601689 BEST4Q8NFU0 473 aa15.35■□□□□ 0.05
UPF1-212ENST00000601689 ADTRPQ96IZ2 230 aa15.35■□□□□ 0.05
UPF1-212ENST00000601689 PARP12Q9H0J9 701 aaKnown RBP15.35■□□□□ 0.05
UPF1-212ENST00000601689 AUNIPQ9H7T9 357 aa15.35■□□□□ 0.05
UPF1-212ENST00000601689 OR5H8P0DN80 308 aa15.34■□□□□ 0.05
UPF1-212ENST00000601689 LUMP51884 338 aaPredicted RBP15.34■□□□□ 0.05
UPF1-212ENST00000601689 F2RL1P55085 397 aa15.34■□□□□ 0.05
UPF1-212ENST00000601689 H1FOOQ8IZA3 346 aaPredicted RBP15.34■□□□□ 0.05
UPF1-212ENST00000601689 OR5AN1Q8NGI8 311 aa15.34■□□□□ 0.05
UPF1-212ENST00000601689 TSNAXQ99598 290 aaKnown RBP15.34■□□□□ 0.05
UPF1-212ENST00000601689 CITED2Q99967 270 aaPredicted RBP15.34■□□□□ 0.05
UPF1-212ENST00000601689 PLSCR3Q9NRY6 295 aa15.34■□□□□ 0.05
UPF1-212ENST00000601689 ZNF107Q9UII5 783 aaPredicted RBP15.34■□□□□ 0.05
UPF1-212ENST00000601689 TSSC4Q9Y5U2 329 aaPredicted RBP15.34■□□□□ 0.05
UPF1-212ENST00000601689 H0YJW9 148 aa15.33■□□□□ 0.04
UPF1-212ENST00000601689 APOA1P02647 267 aa15.33■□□□□ 0.04
UPF1-212ENST00000601689 RRASP10301 218 aa15.33■□□□□ 0.04
UPF1-212ENST00000601689 VDAC1P21796 283 aa15.33■□□□□ 0.04
UPF1-212ENST00000601689 ALDH3B2P48448 385 aa15.33■□□□□ 0.04
UPF1-212ENST00000601689 THBS3P49746 956 aa15.33■□□□□ 0.04
UPF1-212ENST00000601689 RTL8BQ17RB0 113 aa15.33■□□□□ 0.04
UPF1-212ENST00000601689 LIN54Q6MZP7 749 aa15.33■□□□□ 0.04
UPF1-212ENST00000601689 GLDNQ6ZMI3 551 aaPredicted RBP15.33■□□□□ 0.04
UPF1-212ENST00000601689 STPG2Q8N412 459 aa15.33■□□□□ 0.04
UPF1-212ENST00000601689 FAM71E2Q8N5Q1 922 aa15.33■□□□□ 0.04
UPF1-212ENST00000601689 FAM110DQ8TAY7 271 aaPredicted RBP15.33■□□□□ 0.04
UPF1-212ENST00000601689 FLYWCH2Q96CP2 140 aaKnown RBP15.33■□□□□ 0.04
UPF1-212ENST00000601689 SLC35D1Q9NTN3 355 aa15.33■□□□□ 0.04
UPF1-212ENST00000601689 NECAP2Q9NVZ3 263 aa15.33■□□□□ 0.04
UPF1-212ENST00000601689 OR2W1Q9Y3N9 320 aa15.33■□□□□ 0.04
UPF1-212ENST00000601689 ZNF182P17025 639 aaPredicted RBP15.32■□□□□ 0.04
UPF1-212ENST00000601689 RPS16P62249 146 aaKnown RBP15.32■□□□□ 0.04
UPF1-212ENST00000601689 TEX38Q6PEX7 206 aa15.32■□□□□ 0.04
UPF1-212ENST00000601689 HOGA1Q86XE5 327 aa15.32■□□□□ 0.04
UPF1-212ENST00000601689 DRAXINQ8NBI3 349 aaPredicted RBP15.32■□□□□ 0.04
UPF1-212ENST00000601689 NPBQ8NG41 125 aa15.32■□□□□ 0.04
UPF1-212ENST00000601689 SDHAF2Q9NX18 166 aa15.32■□□□□ 0.04
UPF1-212ENST00000601689 IGKV1D-8A0A087WSZ0 117 aa15.31■□□□□ 0.04
UPF1-212ENST00000601689 FAM25AB3EWG3 89 aa15.31■□□□□ 0.04
UPF1-212ENST00000601689 FAM25CB3EWG5 89 aa15.31■□□□□ 0.04
UPF1-212ENST00000601689 FAM25GB3EWG6 89 aa15.31■□□□□ 0.04
UPF1-212ENST00000601689 SSX5O60225 188 aa15.31■□□□□ 0.04
UPF1-212ENST00000601689 PF4V1P10720 104 aa15.31■□□□□ 0.04
UPF1-212ENST00000601689 NFYAP23511 347 aaPredicted RBP15.31■□□□□ 0.04
UPF1-212ENST00000601689 PRSS3P35030 304 aa15.31■□□□□ 0.04
UPF1-212ENST00000601689 RPL5P46777 297 aaKnown RBP15.31■□□□□ 0.04
UPF1-212ENST00000601689 TAS2R20P59543 309 aa15.31■□□□□ 0.04
UPF1-212ENST00000601689 CD83Q01151 205 aa15.31■□□□□ 0.04
UPF1-212ENST00000601689 CTF1Q16619 201 aa15.31■□□□□ 0.04
UPF1-212ENST00000601689 C5orf64Q2M2E5 130 aa15.31■□□□□ 0.04
UPF1-212ENST00000601689 CLVS1Q8IUQ0 354 aaPredicted RBP15.31■□□□□ 0.04
UPF1-212ENST00000601689 ZNF645Q8N7E2 425 aa15.31■□□□□ 0.04
UPF1-212ENST00000601689 WIPF2Q8TF74 440 aaPredicted RBP15.31■□□□□ 0.04
UPF1-212ENST00000601689 RAB2BQ8WUD1 216 aa15.31■□□□□ 0.04
UPF1-212ENST00000601689 R3HDM4Q96D70 268 aa15.31■□□□□ 0.04
UPF1-212ENST00000601689 BCL7BQ9BQE9 202 aa15.31■□□□□ 0.04
UPF1-212ENST00000601689 ZFP57Q9NU63 452 aa15.31■□□□□ 0.04
UPF1-212ENST00000601689 SCOCQ9UIL1 159 aa15.31■□□□□ 0.04
UPF1-212ENST00000601689 MRPS7Q9Y2R9 242 aaKnown RBP15.31■□□□□ 0.04
UPF1-212ENST00000601689 J3QRK9 145 aa15.3■□□□□ 0.04
UPF1-212ENST00000601689 RRHO14718 337 aa15.3■□□□□ 0.04
UPF1-212ENST00000601689 NDUFA3O95167 84 aa15.3■□□□□ 0.04
UPF1-212ENST00000601689 SPDEFO95238 335 aa15.3■□□□□ 0.04
UPF1-212ENST00000601689 HLA-DRB1P01911 266 aa15.3■□□□□ 0.04
UPF1-212ENST00000601689 LGALS7P47929 136 aa15.3■□□□□ 0.04
UPF1-212ENST00000601689 ZNF329Q86UD4 541 aa15.3■□□□□ 0.04
UPF1-212ENST00000601689 NOL4LQ96MY1 436 aaPredicted RBP15.3■□□□□ 0.04
UPF1-212ENST00000601689 ADAM30Q9UKF2 790 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms