RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 GLIPR1P48060 266 aa13.47□□□□□ -0.25
SSBP4-207ENST00000600244 PAX5Q02548 391 aa13.47□□□□□ -0.25
SSBP4-207ENST00000600244 TMEM65Q6PI78 240 aa13.47□□□□□ -0.25
SSBP4-207ENST00000600244 OR5H6Q8NGV6 325 aa13.47□□□□□ -0.25
SSBP4-207ENST00000600244 LGALS14Q8TCE9 139 aa13.47□□□□□ -0.25
SSBP4-207ENST00000600244 KCTD12Q96CX2 325 aaKnown RBP13.47□□□□□ -0.25
SSBP4-207ENST00000600244 NICN1Q9BSH3 213 aa13.47□□□□□ -0.25
SSBP4-207ENST00000600244 NDUFA13Q9P0J0 144 aa13.47□□□□□ -0.25
SSBP4-207ENST00000600244 SPATA2Q9UM82 520 aa13.47□□□□□ -0.25
SSBP4-207ENST00000600244 ETV7Q9Y603 341 aa13.47□□□□□ -0.25
SSBP4-207ENST00000600244 RAB9AP51151 201 aa13.46□□□□□ -0.25
SSBP4-207ENST00000600244 RORCP51449 518 aa13.46□□□□□ -0.25
SSBP4-207ENST00000600244 PITPNAQ00169 270 aa13.46□□□□□ -0.25
SSBP4-207ENST00000600244 SCN1BQ07699 218 aa13.46□□□□□ -0.25
SSBP4-207ENST00000600244 SUMF2Q8NBJ7 301 aa13.46□□□□□ -0.25
SSBP4-207ENST00000600244 KIRREL1Q96J84 757 aa13.46□□□□□ -0.25
SSBP4-207ENST00000600244 S1PR3Q99500 378 aa13.46□□□□□ -0.25
SSBP4-207ENST00000600244 THAP7Q9BT49 309 aaPredicted RBP13.46□□□□□ -0.25
SSBP4-207ENST00000600244 URM1Q9BTM9 101 aaKnown RBP13.46□□□□□ -0.25
SSBP4-207ENST00000600244 TOLLIPQ9H0E2 274 aa13.46□□□□□ -0.25
SSBP4-207ENST00000600244 SPACA1Q9HBV2 294 aa13.46□□□□□ -0.25
SSBP4-207ENST00000600244 RSL24D1Q9UHA3 163 aaKnown RBP13.46□□□□□ -0.25
SSBP4-207ENST00000600244 PKHD1P08F94 4074 aa13.45□□□□□ -0.26
SSBP4-207ENST00000600244 RAB27BO00194 218 aa13.45□□□□□ -0.26
SSBP4-207ENST00000600244 NOL3O60936 208 aaKnown RBP13.45□□□□□ -0.26
SSBP4-207ENST00000600244 GLAP06280 429 aa13.45□□□□□ -0.26
SSBP4-207ENST00000600244 CGB3P0DN86 165 aa13.45□□□□□ -0.26
SSBP4-207ENST00000600244 CGB7P0DN87 165 aa13.45□□□□□ -0.26
SSBP4-207ENST00000600244 ZNF182P17025 639 aaPredicted RBP13.45□□□□□ -0.26
SSBP4-207ENST00000600244 FUT3P21217 361 aa13.45□□□□□ -0.26
SSBP4-207ENST00000600244 NFYBP25208 207 aa13.45□□□□□ -0.26
SSBP4-207ENST00000600244 KCNJ3P48549 501 aa13.45□□□□□ -0.26
SSBP4-207ENST00000600244 TMEM50BP56557 158 aa13.45□□□□□ -0.26
SSBP4-207ENST00000600244 AESQ08117 197 aa13.45□□□□□ -0.26
SSBP4-207ENST00000600244 IZUMO1Q8IYV9 350 aa13.45□□□□□ -0.26
SSBP4-207ENST00000600244 OR2T10Q8NGZ9 312 aa13.45□□□□□ -0.26
SSBP4-207ENST00000600244 SLC25A38Q96DW6 304 aa13.45□□□□□ -0.26
SSBP4-207ENST00000600244 COQ2Q96H96 371 aa13.45□□□□□ -0.26
SSBP4-207ENST00000600244 CYYR1Q96J86 154 aa13.45□□□□□ -0.26
SSBP4-207ENST00000600244 RASL11BQ9BPW5 248 aa13.45□□□□□ -0.26
SSBP4-207ENST00000600244 DPCDQ9BVM2 203 aaPredicted RBP13.45□□□□□ -0.26
SSBP4-207ENST00000600244 IGHV4OR15-8A0A075B7B6 117 aa13.44□□□□□ -0.26
SSBP4-207ENST00000600244 A0A087WW49 117 aa13.44□□□□□ -0.26
SSBP4-207ENST00000600244 IGHV3-72A0A0B4J1Y9 119 aa13.44□□□□□ -0.26
SSBP4-207ENST00000600244 ODAMA1E959 279 aa13.44□□□□□ -0.26
SSBP4-207ENST00000600244 FUOMA2VDF0 154 aa13.44□□□□□ -0.26
SSBP4-207ENST00000600244 A6NHS1 94 aa13.44□□□□□ -0.26
SSBP4-207ENST00000600244 ZNF729A6NN14 1252 aaPredicted RBP13.44□□□□□ -0.26
SSBP4-207ENST00000600244 SOCS1O15524 211 aa13.44□□□□□ -0.26
SSBP4-207ENST00000600244 PDCD6O75340 191 aa13.44□□□□□ -0.26
SSBP4-207ENST00000600244 SOX6P35712 828 aa13.44□□□□□ -0.26
SSBP4-207ENST00000600244 ZNF816Q0VGE8 651 aaPredicted RBP13.44□□□□□ -0.26
SSBP4-207ENST00000600244 PAN3Q58A45 887 aaKnown RBP13.44□□□□□ -0.26
SSBP4-207ENST00000600244 RAB12Q6IQ22 244 aa13.44□□□□□ -0.26
SSBP4-207ENST00000600244 GAPTQ8N292 157 aa13.44□□□□□ -0.26
SSBP4-207ENST00000600244 ACOT12Q8WYK0 555 aa13.44□□□□□ -0.26
SSBP4-207ENST00000600244 LEAP2Q969E1 77 aa13.44□□□□□ -0.26
SSBP4-207ENST00000600244 DGCR14Q96DF8 476 aaKnown RBP13.44□□□□□ -0.26
SSBP4-207ENST00000600244 NCOR1P1Q9H4R4 102 aa13.44□□□□□ -0.26
SSBP4-207ENST00000600244 CCDC59Q9P031 241 aaKnown RBP13.44□□□□□ -0.26
SSBP4-207ENST00000600244 HSF4Q9ULV5 492 aa13.44□□□□□ -0.26
SSBP4-207ENST00000600244 PSG11Q9UQ72 335 aa13.44□□□□□ -0.26
SSBP4-207ENST00000600244 DYNC1H1Q14204 4646 aaKnown RBP13.44□□□□□ -0.26
SSBP4-207ENST00000600244 IGHV1-3A0A0C4DH29 117 aa13.43□□□□□ -0.26
SSBP4-207ENST00000600244 NUPR2A6NF83 97 aa13.43□□□□□ -0.26
SSBP4-207ENST00000600244 IGHV3-7P01780 117 aa13.43□□□□□ -0.26
SSBP4-207ENST00000600244 MOGAT2Q3SYC2 334 aa13.43□□□□□ -0.26
SSBP4-207ENST00000600244 PLAC9Q5JTB6 97 aa13.43□□□□□ -0.26
SSBP4-207ENST00000600244 ATAD3CQ5T2N8 411 aa13.43□□□□□ -0.26
SSBP4-207ENST00000600244 RSBN1Q5VWQ0 802 aaPredicted RBP13.43□□□□□ -0.26
SSBP4-207ENST00000600244 OR56B1Q8NGI3 324 aa13.43□□□□□ -0.26
SSBP4-207ENST00000600244 PLPPR1Q8TBJ4 325 aa13.43□□□□□ -0.26
SSBP4-207ENST00000600244 SLIRPQ9GZT3 109 aaKnown RBP13.43□□□□□ -0.26
SSBP4-207ENST00000600244 RHBDL2Q9NX52 303 aa13.43□□□□□ -0.26
SSBP4-207ENST00000600244 PEX16Q9Y5Y5 336 aa13.43□□□□□ -0.26
SSBP4-207ENST00000600244 WSB1Q9Y6I7 421 aa13.43□□□□□ -0.26
SSBP4-207ENST00000600244 KBTBD11-OT1A0A1B0GTJ5 212 aa13.42□□□□□ -0.26
SSBP4-207ENST00000600244 CCDC160A6NGH7 325 aa13.42□□□□□ -0.26
SSBP4-207ENST00000600244 G3V318 75 aa13.42□□□□□ -0.26
SSBP4-207ENST00000600244 BLVRBP30043 206 aaPredicted RBP13.42□□□□□ -0.26
SSBP4-207ENST00000600244 LGALS9CQ6DKI2 356 aa13.42□□□□□ -0.26
SSBP4-207ENST00000600244 CEMP1Q6PRD7 247 aaPredicted RBP13.42□□□□□ -0.26
SSBP4-207ENST00000600244 MOB3BQ86TA1 216 aa13.42□□□□□ -0.26
SSBP4-207ENST00000600244 CMTM3Q96MX0 182 aa13.42□□□□□ -0.26
SSBP4-207ENST00000600244 SULT4A1Q9BR01 284 aa13.42□□□□□ -0.26
SSBP4-207ENST00000600244 ELOVL1Q9BW60 279 aa13.42□□□□□ -0.26
SSBP4-207ENST00000600244 KCNK7Q9Y2U2 307 aa13.42□□□□□ -0.26
SSBP4-207ENST00000600244 METTL21EPA6NDL7 271 aa13.41□□□□□ -0.26
SSBP4-207ENST00000600244 CXorf65A6NEN9 183 aa13.41□□□□□ -0.26
SSBP4-207ENST00000600244 MCRIP1C9JLW8 97 aa13.41□□□□□ -0.26
SSBP4-207ENST00000600244 HSPB6O14558 160 aa13.41□□□□□ -0.26
SSBP4-207ENST00000600244 PMS2P11Q13670 270 aa13.41□□□□□ -0.26
SSBP4-207ENST00000600244 ATXN7L3Q14CW9 347 aaPredicted RBP13.41□□□□□ -0.26
SSBP4-207ENST00000600244 ZNF497Q6ZNH5 498 aa13.41□□□□□ -0.26
SSBP4-207ENST00000600244 C6orf201Q7Z4U5 140 aa13.41□□□□□ -0.26
SSBP4-207ENST00000600244 OR8H1Q8NGG4 311 aa13.41□□□□□ -0.26
SSBP4-207ENST00000600244 OR10R2Q8NGX6 335 aa13.41□□□□□ -0.26
SSBP4-207ENST00000600244 AP3S1Q92572 193 aa13.41□□□□□ -0.26
SSBP4-207ENST00000600244 NXF2Q9GZY0 626 aaKnown RBP13.41□□□□□ -0.26
SSBP4-207ENST00000600244 ATG5Q9H1Y0 275 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms