RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 DEFB136Q30KP8 78 aa14.69□□□□□ -0.06
PNKP-213ENST00000599543 ZNF554Q86TJ5 538 aa14.69□□□□□ -0.06
PNKP-213ENST00000599543 SLC25A46Q96AG3 418 aa14.69□□□□□ -0.06
PNKP-213ENST00000599543 ABHD14AQ9BUJ0 271 aa14.69□□□□□ -0.06
PNKP-213ENST00000599543 PARP12Q9H0J9 701 aaKnown RBP14.69□□□□□ -0.06
PNKP-213ENST00000599543 Q9N2K0 584 aa14.69□□□□□ -0.06
PNKP-213ENST00000599543 OR1A1Q9P1Q5 309 aa14.69□□□□□ -0.06
PNKP-213ENST00000599543 JPT1Q9UK76 154 aa14.69□□□□□ -0.06
PNKP-213ENST00000599543 ETV7Q9Y603 341 aa14.69□□□□□ -0.06
PNKP-213ENST00000599543 TRAV18A0A075B6X5 111 aa14.68□□□□□ -0.06
PNKP-213ENST00000599543 FCGR3AP08637 254 aa14.68□□□□□ -0.06
PNKP-213ENST00000599543 PTHLHP12272 177 aa14.68□□□□□ -0.06
PNKP-213ENST00000599543 HLA-DRB3P79483 266 aa14.68□□□□□ -0.06
PNKP-213ENST00000599543 MRPS15P82914 257 aaKnown RBP14.68□□□□□ -0.06
PNKP-213ENST00000599543 SPCS2Q15005 226 aa14.68□□□□□ -0.06
PNKP-213ENST00000599543 MMDQ15546 238 aa14.68□□□□□ -0.06
PNKP-213ENST00000599543 MORN2Q502X0 79 aa14.68□□□□□ -0.06
PNKP-213ENST00000599543 SAMD12Q8N8I0 201 aa14.68□□□□□ -0.06
PNKP-213ENST00000599543 RNF152Q8N8N0 203 aa14.68□□□□□ -0.06
PNKP-213ENST00000599543 NUDCD2Q8WVJ2 157 aa14.68□□□□□ -0.06
PNKP-213ENST00000599543 DCSTAMPQ9H295 470 aa14.68□□□□□ -0.06
PNKP-213ENST00000599543 ABRACLQ9P1F3 81 aa14.68□□□□□ -0.06
PNKP-213ENST00000599543 SPATA2Q9UM82 520 aa14.68□□□□□ -0.06
PNKP-213ENST00000599543 TRBV6-6A0A0A6YYG2 114 aa14.67□□□□□ -0.06
PNKP-213ENST00000599543 FCER2P06734 321 aa14.67□□□□□ -0.06
PNKP-213ENST00000599543 OR5H8P0DN80 308 aa14.67□□□□□ -0.06
PNKP-213ENST00000599543 RPL5P46777 297 aaKnown RBP14.67□□□□□ -0.06
PNKP-213ENST00000599543 CDX1P47902 265 aaPredicted RBP14.67□□□□□ -0.06
PNKP-213ENST00000599543 DGCR2P98153 550 aa14.67□□□□□ -0.06
PNKP-213ENST00000599543 C11orf87Q6NUJ2 197 aa14.67□□□□□ -0.06
PNKP-213ENST00000599543 MOB1BQ7L9L4 216 aa14.67□□□□□ -0.06
PNKP-213ENST00000599543 OR5M8Q8NGP6 311 aa14.67□□□□□ -0.06
PNKP-213ENST00000599543 GALMQ96C23 342 aa14.67□□□□□ -0.06
PNKP-213ENST00000599543 B9D2Q9BPU9 175 aa14.67□□□□□ -0.06
PNKP-213ENST00000599543 RIMS4Q9H426 269 aaPredicted RBP14.67□□□□□ -0.06
PNKP-213ENST00000599543 COMMD3Q9UBI1 195 aa14.67□□□□□ -0.06
PNKP-213ENST00000599543 ZNF107Q9UII5 783 aaPredicted RBP14.67□□□□□ -0.06
PNKP-213ENST00000599543 TENM3Q9P273 2699 aa14.67□□□□□ -0.06
PNKP-213ENST00000599543 NBEAL2Q6ZNJ1 2754 aa14.66□□□□□ -0.06
PNKP-213ENST00000599543 IGKV1D-8A0A087WSZ0 117 aa14.66□□□□□ -0.06
PNKP-213ENST00000599543 IGKV1-6A0A0C4DH72 117 aa14.66□□□□□ -0.06
PNKP-213ENST00000599543 RGS11O94810 467 aa14.66□□□□□ -0.06
PNKP-213ENST00000599543 IGHG4P01861 327 aa14.66□□□□□ -0.06
PNKP-213ENST00000599543 IGF1P05019 195 aa14.66□□□□□ -0.06
PNKP-213ENST00000599543 TALDO1P37837 337 aa14.66□□□□□ -0.06
PNKP-213ENST00000599543 HTD2P86397 168 aa14.66□□□□□ -0.06
PNKP-213ENST00000599543 CFHR3Q02985 330 aa14.66□□□□□ -0.06
PNKP-213ENST00000599543 KIR2DS1Q14954 304 aa14.66□□□□□ -0.06
PNKP-213ENST00000599543 ZNF260Q3ZCT1 412 aa14.66□□□□□ -0.06
PNKP-213ENST00000599543 C4orf3Q8WVX3 66 aa14.66□□□□□ -0.06
PNKP-213ENST00000599543 SLC23A1Q9UHI7 598 aa14.66□□□□□ -0.06
PNKP-213ENST00000599543 SCOCQ9UIL1 159 aa14.66□□□□□ -0.06
PNKP-213ENST00000599543 ZNF580Q9UK33 172 aa14.66□□□□□ -0.06
PNKP-213ENST00000599543 DNAH9Q9NYC9 4486 aa14.65□□□□□ -0.06
PNKP-213ENST00000599543 TRDCB7Z8K6 153 aa14.65□□□□□ -0.06
PNKP-213ENST00000599543 SSX5O60225 188 aa14.65□□□□□ -0.06
PNKP-213ENST00000599543 EIF4EP06730 217 aaKnown RBP14.65□□□□□ -0.06
PNKP-213ENST00000599543 GSTT2P0CG29 244 aa14.65□□□□□ -0.06
PNKP-213ENST00000599543 GSTT2BP0CG30 244 aa14.65□□□□□ -0.06
PNKP-213ENST00000599543 LUMP51884 338 aaPredicted RBP14.65□□□□□ -0.06
PNKP-213ENST00000599543 IGSF11Q5DX21 431 aa14.65□□□□□ -0.06
PNKP-213ENST00000599543 CROCCP3Q8IVE0 287 aa14.65□□□□□ -0.06
PNKP-213ENST00000599543 OR2AK2Q8NG84 335 aa14.65□□□□□ -0.06
PNKP-213ENST00000599543 ST6GALNAC5Q9BVH7 336 aa14.65□□□□□ -0.06
PNKP-213ENST00000599543 MRPL20Q9BYC9 149 aaKnown RBP14.65□□□□□ -0.06
PNKP-213ENST00000599543 BET1O15155 118 aa14.64□□□□□ -0.07
PNKP-213ENST00000599543 ST8SIA5O15466 376 aa14.64□□□□□ -0.07
PNKP-213ENST00000599543 YPEL1O60688 119 aa14.64□□□□□ -0.07
PNKP-213ENST00000599543 RAMP3O60896 148 aa14.64□□□□□ -0.07
PNKP-213ENST00000599543 PSMB8P28062 276 aa14.64□□□□□ -0.07
PNKP-213ENST00000599543 SCAND1P57086 179 aa14.64□□□□□ -0.07
PNKP-213ENST00000599543 GNG2P59768 71 aa14.64□□□□□ -0.07
PNKP-213ENST00000599543 ACTBP60709 375 aa14.64□□□□□ -0.07
PNKP-213ENST00000599543 UBE2NLQ5JXB2 153 aa14.64□□□□□ -0.07
PNKP-213ENST00000599543 HACD4Q5VWC8 232 aa14.64□□□□□ -0.07
PNKP-213ENST00000599543 ODF3L1Q8IXM7 274 aa14.64□□□□□ -0.07
PNKP-213ENST00000599543 YPEL2Q96QA6 119 aa14.64□□□□□ -0.07
PNKP-213ENST00000599543 ZNF251Q9BRH9 671 aa14.64□□□□□ -0.07
PNKP-213ENST00000599543 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.64□□□□□ -0.07
PNKP-213ENST00000599543 SAA2-SAA4A0A096LPE2 208 aa14.63□□□□□ -0.07
PNKP-213ENST00000599543 MEIS3P1A6NDR6 274 aa14.63□□□□□ -0.07
PNKP-213ENST00000599543 FABP7O15540 132 aa14.63□□□□□ -0.07
PNKP-213ENST00000599543 HSPA12AO43301 675 aa14.63□□□□□ -0.07
PNKP-213ENST00000599543 HPGDSO60760 199 aa14.63□□□□□ -0.07
PNKP-213ENST00000599543 SAA2P0DJI9 122 aaPredicted RBP14.63□□□□□ -0.07
PNKP-213ENST00000599543 CEACAM6P40199 344 aa14.63□□□□□ -0.07
PNKP-213ENST00000599543 OR3A3P47888 321 aa14.63□□□□□ -0.07
PNKP-213ENST00000599543 RORCP51449 518 aa14.63□□□□□ -0.07
PNKP-213ENST00000599543 C9orf66Q5T8R8 295 aa14.63□□□□□ -0.07
PNKP-213ENST00000599543 TMEM65Q6PI78 240 aa14.63□□□□□ -0.07
PNKP-213ENST00000599543 ZNF833PQ6ZTB9 187 aa14.63□□□□□ -0.07
PNKP-213ENST00000599543 NABP2Q9BQ15 211 aa14.63□□□□□ -0.07
PNKP-213ENST00000599543 PARP11Q9NR21 331 aa14.63□□□□□ -0.07
PNKP-213ENST00000599543 SEC14L6B5MCN3 397 aa14.62□□□□□ -0.07
PNKP-213ENST00000599543 NBR2O15453 112 aa14.62□□□□□ -0.07
PNKP-213ENST00000599543 SCGNO76038 276 aa14.62□□□□□ -0.07
PNKP-213ENST00000599543 HLA-DRB1P01911 266 aa14.62□□□□□ -0.07
PNKP-213ENST00000599543 GSTP1P09211 210 aaKnown RBP14.62□□□□□ -0.07
PNKP-213ENST00000599543 LY6G6FQ5SQ64 297 aa14.62□□□□□ -0.07
PNKP-213ENST00000599543 AUNIPQ9H7T9 357 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms